Wall clock time and date at job start Mon Mar 30 2020 01:44:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35176 * 126.05199 * 2 1 4 4 C 1.40516 * 107.87559 * 180.19739 * 3 2 1 5 5 N 1.39676 * 125.98859 * 179.82822 * 4 3 2 6 6 C 1.34786 * 119.99711 * 359.71531 * 5 4 3 7 7 O 1.21763 * 119.99948 * 359.97438 * 6 5 4 8 8 C 1.46113 * 119.99989 * 179.72304 * 6 5 4 9 9 H 1.08002 * 119.99659 * 0.27818 * 8 6 5 10 10 C 1.40119 * 120.00058 * 180.27085 * 8 6 5 11 11 N 1.30634 * 120.00367 * 0.02562 * 10 8 6 12 12 Si 1.86803 * 120.00146 * 180.02562 * 10 8 6 13 13 H 1.48505 * 109.47077 * 0.02562 * 12 10 8 14 14 H 1.48500 * 109.47093 * 120.00020 * 12 10 8 15 15 H 1.48503 * 109.47239 * 240.00300 * 12 10 8 16 16 N 1.31410 * 108.02660 * 359.56374 * 4 3 2 17 17 N 1.35073 * 126.04898 * 179.72272 * 2 1 3 18 18 C 1.46501 * 125.96551 * 359.96244 * 17 2 1 19 19 C 1.52998 * 109.47169 * 269.97118 * 18 17 2 20 20 F 1.39901 * 109.46499 * 60.00503 * 19 18 17 21 21 F 1.39902 * 109.47051 * 180.02562 * 19 18 17 22 22 F 1.39895 * 109.47313 * 300.00404 * 19 18 17 23 23 H 1.08999 * 109.46698 * 270.28352 * 1 2 3 24 24 H 1.09002 * 109.46925 * 30.27986 * 1 2 3 25 25 H 1.08994 * 109.47511 * 150.27506 * 1 2 3 26 26 H 1.08000 * 126.06324 * 0.04090 * 3 2 1 27 27 H 0.96990 * 120.00596 * 179.71055 * 5 4 3 28 28 H 0.96999 * 120.00324 * 179.97438 * 11 10 8 29 29 H 1.09000 * 109.47459 * 29.98016 * 18 17 2 30 30 H 1.08999 * 109.46714 * 149.97721 * 18 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3025 1.0929 0.0000 4 6 3.6376 0.6545 -0.0046 5 7 4.7699 1.4723 -0.0095 6 6 4.6328 2.8131 -0.0159 7 8 3.5218 3.3115 -0.0179 8 6 5.8173 3.6687 -0.0149 9 1 6.8026 3.2265 -0.0136 10 6 5.6747 5.0626 -0.0158 11 7 4.4829 5.5973 -0.0170 12 14 7.1891 6.1564 -0.0152 13 1 8.4101 5.3112 -0.0144 14 1 7.1814 7.0130 -1.2282 15 1 7.1795 7.0144 1.1968 16 7 3.6342 -0.6595 0.0023 17 7 2.3019 -1.0921 0.0053 18 6 1.8495 -2.4855 0.0128 19 6 1.6935 -2.9632 1.4579 20 9 0.7515 -2.1636 2.1141 21 9 1.2620 -4.2941 1.4650 22 9 2.9245 -2.8690 2.1157 23 1 -0.3633 0.0051 1.0277 24 1 -0.3633 0.8875 -0.5182 25 1 -0.3634 -0.8924 -0.5095 26 1 1.9708 2.1207 0.0006 27 1 5.6549 1.0754 -0.0082 28 1 4.3842 6.5623 -0.0173 29 1 0.8904 -2.5589 -0.4998 30 1 2.5834 -3.1084 -0.4985 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001451805299.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:44:36 Heat of formation + Delta-G solvation = -112.117350 kcal Electronic energy + Delta-G solvation = -21436.625849 eV Core-core repulsion = 17432.915556 eV Total energy + Delta-G solvation = -4003.710293 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 277.078 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -50.17902 -47.74562 -47.60639 -40.75526 -37.56127 -34.25450 -32.71707 -32.32610 -31.44923 -27.99765 -26.59814 -26.30889 -23.53257 -21.48230 -19.97009 -19.26150 -18.61481 -18.49689 -17.83868 -17.03251 -16.07040 -15.46502 -15.22338 -14.61759 -14.55625 -14.51775 -14.19825 -14.09097 -13.81390 -13.78070 -13.43265 -13.03623 -12.97087 -12.66436 -12.56304 -12.26938 -11.83813 -11.75067 -11.33754 -11.14618 -10.68262 -10.32197 -10.02422 -9.79365 -8.97415 -8.07002 -7.77808 -7.36010 -6.38379 -4.85296 2.00826 2.43187 2.78340 3.05455 3.14732 3.19378 3.52425 3.65078 3.78374 3.95915 4.11742 4.46711 4.48332 4.68445 4.84004 4.96338 5.25602 5.64077 5.65990 5.91942 5.96068 6.42795 6.52868 7.04905 7.27312 7.41745 7.55504 7.99969 8.02815 8.33028 8.82639 9.23904 10.34066 10.52924 Molecular weight = 277.08amu Principal moments of inertia in cm(-1) A = 0.039897 B = 0.004051 C = 0.003843 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 701.640107 B = 6910.506776 C = 7283.821500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.075 3.925 3 C -0.243 4.243 4 C 0.343 3.657 5 N -0.655 5.655 6 C 0.549 3.451 7 O -0.554 6.554 8 C -0.533 4.533 9 H 0.075 0.925 10 C 0.087 3.913 11 N -0.758 5.758 12 Si 0.915 3.085 13 H -0.262 1.262 14 H -0.274 1.274 15 H -0.274 1.274 16 N -0.353 5.353 17 N -0.398 5.398 18 C 0.110 3.890 19 C 0.433 3.567 20 F -0.179 7.179 21 F -0.183 7.183 22 F -0.171 7.171 23 H 0.078 0.922 24 H 0.087 0.913 25 H 0.062 0.938 26 H 0.179 0.821 27 H 0.398 0.602 28 H 0.272 0.728 29 H 0.129 0.871 30 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.592 -13.867 -0.222 15.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.047 4.047 3 C -0.273 4.273 4 C 0.085 3.915 5 N -0.304 5.304 6 C 0.355 3.645 7 O -0.434 6.434 8 C -0.569 4.569 9 H 0.093 0.907 10 C -0.134 4.134 11 N -0.386 5.386 12 Si 0.739 3.261 13 H -0.186 1.186 14 H -0.200 1.200 15 H -0.200 1.200 16 N -0.184 5.184 17 N -0.184 5.184 18 C -0.016 4.016 19 C 0.377 3.623 20 F -0.161 7.161 21 F -0.165 7.165 22 F -0.152 7.152 23 H 0.097 0.903 24 H 0.105 0.895 25 H 0.081 0.919 26 H 0.196 0.804 27 H 0.232 0.768 28 H 0.083 0.917 29 H 0.146 0.854 30 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -6.826 -14.356 -0.194 15.897 hybrid contribution 0.724 0.766 0.309 1.099 sum -6.101 -13.589 0.115 14.897 Atomic orbital electron populations 1.20419 0.87716 1.03239 1.03199 1.21123 0.94398 0.86729 1.02467 1.21965 0.90337 1.00486 1.14529 1.19594 0.89844 0.88655 0.93396 1.43639 1.04732 1.06654 1.75386 1.18427 0.91187 0.77708 0.77147 1.90533 1.27011 1.72071 1.53825 1.20812 0.91947 0.90507 1.53651 0.90670 1.25733 0.96892 0.98372 0.92443 1.69983 1.22929 1.12065 1.33635 0.86187 0.81690 0.79837 0.78377 1.18562 1.19972 1.19963 1.77519 0.94458 1.10265 1.36169 1.47353 1.04225 1.02664 1.64138 1.22400 1.05253 0.82995 0.90947 1.21261 0.74368 0.75092 0.91594 1.93204 1.65623 1.73566 1.83678 1.93186 1.90016 1.36240 1.97035 1.93248 1.42972 1.95727 1.83291 0.90290 0.89465 0.91901 0.80371 0.76838 0.91695 0.85363 0.84948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.05 9.85 36.00 0.35 -0.69 16 2 C 0.07 1.27 6.71 -82.26 -0.55 0.72 16 3 C -0.24 -5.30 9.51 -39.81 -0.38 -5.68 16 4 C 0.34 7.77 8.10 -154.67 -1.25 6.52 16 5 N -0.66 -15.44 5.43 -12.52 -0.07 -15.51 16 6 C 0.55 15.15 7.70 -13.10 -0.10 15.05 16 7 O -0.55 -16.78 12.13 5.13 0.06 -16.72 16 8 C -0.53 -14.36 9.53 -35.72 -0.34 -14.70 16 9 H 0.08 1.85 7.85 -52.49 -0.41 1.43 16 10 C 0.09 2.30 5.50 -17.36 -0.10 2.21 16 11 N -0.76 -21.47 11.82 55.55 0.66 -20.82 16 12 Si 0.91 19.19 29.56 -169.99 -5.02 14.17 16 13 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 14 H -0.27 -5.65 7.11 56.52 0.40 -5.24 16 15 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 16 N -0.35 -7.12 12.60 31.39 0.40 -6.73 16 17 N -0.40 -6.55 3.47 -57.15 -0.20 -6.74 16 18 C 0.11 1.22 6.21 -4.04 -0.03 1.19 16 19 C 0.43 5.28 3.29 37.16 0.12 5.41 16 20 F -0.18 -2.38 16.77 2.25 0.04 -2.35 16 21 F -0.18 -1.95 17.32 2.25 0.04 -1.91 16 22 F -0.17 -2.60 17.23 2.25 0.04 -2.56 16 23 H 0.08 0.91 8.14 -51.93 -0.42 0.48 16 24 H 0.09 1.00 8.14 -51.93 -0.42 0.58 16 25 H 0.06 0.56 7.07 -51.93 -0.37 0.20 16 26 H 0.18 4.34 5.90 -52.49 -0.31 4.03 16 27 H 0.40 8.28 8.80 -40.82 -0.36 7.92 16 28 H 0.27 6.95 8.29 -40.82 -0.34 6.61 16 29 H 0.13 0.94 7.04 -51.93 -0.37 0.57 16 30 H 0.13 1.22 8.14 -51.93 -0.42 0.80 16 LS Contribution 283.43 15.07 4.27 4.27 Total: -1.00 -33.40 283.43 -4.27 -37.67 By element: Atomic # 1 Polarization: 9.42 SS G_CDS: -2.21 Total: 7.21 kcal Atomic # 6 Polarization: 12.30 SS G_CDS: -2.27 Total: 10.03 kcal Atomic # 7 Polarization: -50.59 SS G_CDS: 0.79 Total: -49.80 kcal Atomic # 8 Polarization: -16.78 SS G_CDS: 0.06 Total: -16.72 kcal Atomic # 9 Polarization: -6.94 SS G_CDS: 0.12 Total: -6.82 kcal Atomic # 14 Polarization: 19.19 SS G_CDS: -5.02 Total: 14.17 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -33.40 -4.27 -37.67 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001451805299.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.447 kcal (2) G-P(sol) polarization free energy of solvation -33.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.670 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds