Wall clock time and date at job start Mon Mar 30 2020 01:33:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34780 * 120.00228 * 2 1 4 4 O 1.21597 * 119.99226 * 0.02562 * 3 2 1 5 5 N 1.34775 * 120.00049 * 180.02562 * 3 2 1 6 6 N 1.40099 * 120.00159 * 0.02562 * 5 3 2 7 7 C 1.29798 * 120.00012 * 179.97438 * 6 5 3 8 8 C 1.50697 * 119.99925 * 359.97438 * 7 6 5 9 9 C 1.47376 * 119.99801 * 179.97438 * 7 6 5 10 10 C 1.39796 * 120.08809 * 0.02562 * 9 7 6 11 11 C 1.37725 * 119.91484 * 180.02562 * 10 9 7 12 12 C 1.39079 * 120.08344 * 0.02562 * 11 10 9 13 13 O 1.35656 * 119.91177 * 179.97438 * 12 11 10 14 14 C 1.34806 * 117.00164 * 5.54986 * 13 12 11 15 15 H 1.08002 * 120.00092 * 354.94165 * 14 13 12 16 16 C 1.38637 * 120.00112 * 174.94530 * 14 13 12 17 17 N 1.31565 * 120.00188 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 120.00052 * 180.02562 * 16 14 13 19 19 H 1.48499 * 109.47072 * 359.97438 * 18 16 14 20 20 H 1.48505 * 109.46853 * 119.99605 * 18 16 14 21 21 H 1.48496 * 109.47308 * 239.99768 * 18 16 14 22 22 C 1.39073 * 120.17487 * 0.23653 * 12 11 10 23 23 C 1.37727 * 120.08640 * 359.48710 * 22 12 11 24 24 H 1.09003 * 109.47024 * 299.99586 * 1 2 3 25 25 H 1.08999 * 109.47478 * 59.99429 * 1 2 3 26 26 H 1.09005 * 109.47018 * 179.97438 * 1 2 3 27 27 H 0.97004 * 120.00248 * 180.02562 * 2 1 3 28 28 H 0.97001 * 119.99587 * 179.97438 * 5 3 2 29 29 H 1.08996 * 109.47257 * 270.00197 * 8 7 6 30 30 H 1.08999 * 109.47132 * 30.00291 * 8 7 6 31 31 H 1.08997 * 109.46912 * 150.00204 * 8 7 6 32 32 H 1.07997 * 120.04652 * 359.97438 * 10 9 7 33 33 H 1.07998 * 119.96331 * 179.97438 * 11 10 9 34 34 H 0.96997 * 120.00554 * 180.02562 * 17 16 14 35 35 H 1.07998 * 119.95747 * 179.74614 * 22 12 11 36 36 H 1.07997 * 120.04332 * 180.23657 * 23 22 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 1.5308 2.2202 0.0005 5 7 3.4867 1.1672 -0.0005 6 7 4.1872 -0.0461 -0.0016 7 6 5.4851 -0.0461 -0.0026 8 6 6.2386 1.2589 -0.0032 9 6 6.2220 -1.3225 -0.0032 10 6 5.5248 -2.5342 -0.0032 11 6 6.2170 -3.7249 -0.0032 12 6 7.6078 -3.7227 -0.0026 13 8 8.2860 -4.8976 -0.0021 14 6 7.5568 -6.0254 -0.1183 15 1 6.4780 -5.9727 -0.1241 16 6 8.1914 -7.2528 -0.2303 17 7 9.5055 -7.3170 -0.2237 18 14 7.1809 -8.8155 -0.3920 19 1 5.7357 -8.4746 -0.3737 20 1 7.5145 -9.4904 -1.6721 21 1 7.4891 -9.7239 0.7415 22 6 8.3050 -2.5194 0.0029 23 6 7.6200 -1.3246 -0.0029 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 1.9500 -0.8401 -0.0004 28 1 3.9716 2.0072 -0.0009 29 1 6.4195 1.5736 -1.0309 30 1 5.6500 2.0186 0.5111 31 1 7.1914 1.1286 0.5099 32 1 4.4448 -2.5367 -0.0023 33 1 5.6792 -4.6614 -0.0028 34 1 9.9496 -8.1757 -0.3024 35 1 9.3849 -2.5219 0.0074 36 1 8.1621 -0.3905 -0.0024 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000920377337.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:33:16 Heat of formation + Delta-G solvation = 8.287900 kcal Electronic energy + Delta-G solvation = -20207.636211 eV Core-core repulsion = 16886.836917 eV Total energy + Delta-G solvation = -3320.799295 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 277.121 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -39.96297 -39.24083 -37.69033 -36.11925 -34.54997 -32.90224 -32.26239 -30.57211 -28.70992 -28.20260 -26.50248 -25.56040 -22.62317 -21.94498 -20.84785 -19.70710 -18.48735 -18.13179 -17.15584 -16.80754 -15.64238 -15.29105 -15.01542 -14.57148 -14.33257 -14.25178 -14.19391 -13.92220 -13.73496 -13.18170 -12.98514 -12.62755 -12.37086 -12.25422 -11.87834 -11.83589 -11.39025 -11.26779 -11.01216 -10.81359 -10.54441 -10.49436 -10.12580 -9.47757 -9.32118 -9.09250 -8.67185 -8.38168 -7.18952 -6.64618 -4.20697 1.29976 2.11583 2.55811 2.67381 3.03773 3.04872 3.10461 3.29553 3.60317 3.82213 4.46273 4.60355 4.92144 4.95151 5.05814 5.09161 5.25252 5.36894 5.40722 5.55578 5.63241 5.67714 5.82592 5.95226 6.10201 6.27536 6.40340 6.48069 6.73545 6.76670 6.88970 7.04040 7.16615 7.25076 7.42532 7.60470 7.80768 8.15183 8.61534 8.80560 9.46877 10.52156 Molecular weight = 277.12amu Principal moments of inertia in cm(-1) A = 0.022675 B = 0.003521 C = 0.003056 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1234.518475 B = 7949.644100 C = 9159.673717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.104 3.896 2 N -0.735 5.735 3 C 0.731 3.269 4 O -0.598 6.598 5 N -0.592 5.592 6 N -0.295 5.295 7 C 0.187 3.813 8 C -0.158 4.158 9 C -0.167 4.167 10 C -0.021 4.021 11 C -0.243 4.243 12 C 0.168 3.832 13 O -0.165 6.165 14 C -0.392 4.392 15 H 0.098 0.902 16 C 0.041 3.959 17 N -0.853 5.853 18 Si 0.944 3.056 19 H -0.265 1.265 20 H -0.274 1.274 21 H -0.274 1.274 22 C -0.197 4.197 23 C -0.041 4.041 24 H 0.056 0.944 25 H 0.056 0.944 26 H 0.076 0.924 27 H 0.411 0.589 28 H 0.395 0.605 29 H 0.085 0.915 30 H 0.065 0.935 31 H 0.089 0.911 32 H 0.118 0.882 33 H 0.131 0.869 34 H 0.273 0.727 35 H 0.122 0.878 36 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.405 10.115 0.170 13.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.041 4.041 2 N -0.390 5.390 3 C 0.431 3.569 4 O -0.475 6.475 5 N -0.339 5.339 6 N -0.107 5.107 7 C 0.001 3.999 8 C -0.218 4.218 9 C -0.171 4.171 10 C -0.042 4.042 11 C -0.263 4.263 12 C 0.111 3.889 13 O -0.065 6.065 14 C -0.468 4.468 15 H 0.115 0.885 16 C -0.165 4.165 17 N -0.486 5.486 18 Si 0.768 3.232 19 H -0.189 1.189 20 H -0.199 1.199 21 H -0.200 1.200 22 C -0.216 4.216 23 C -0.062 4.062 24 H 0.075 0.925 25 H 0.075 0.925 26 H 0.095 0.905 27 H 0.247 0.753 28 H 0.237 0.763 29 H 0.103 0.897 30 H 0.084 0.916 31 H 0.108 0.892 32 H 0.136 0.864 33 H 0.149 0.851 34 H 0.083 0.917 35 H 0.140 0.860 36 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -9.504 10.078 0.177 13.853 hybrid contribution 0.554 -0.242 -0.073 0.609 sum -8.949 9.836 0.104 13.298 Atomic orbital electron populations 1.21427 0.78545 1.02106 1.01996 1.44870 1.07368 1.08011 1.78798 1.15452 0.79948 0.84387 0.77102 1.90964 1.66112 1.31002 1.59427 1.46233 1.04698 1.05730 1.77202 1.74605 1.08958 1.06234 1.20902 1.23154 0.89452 0.95026 0.92306 1.21341 1.02068 0.94694 1.03674 1.17631 0.92177 0.89370 1.17935 1.20896 0.98946 0.90920 0.93411 1.21120 0.93967 0.98647 1.12553 1.19584 0.90758 0.87353 0.91177 1.83934 1.35467 1.11217 1.75919 1.21497 0.91471 0.81873 1.51939 0.88494 1.25375 0.96198 0.98834 0.96067 1.70042 1.07698 1.26629 1.44279 0.85594 0.79273 0.79852 0.78461 1.18864 1.19943 1.19961 1.20108 0.99690 0.89812 1.12013 1.20725 0.92283 0.96876 0.96269 0.92498 0.92504 0.90528 0.75293 0.76285 0.89662 0.91646 0.89192 0.86410 0.85131 0.91700 0.85979 0.86283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.00 10.70 59.84 0.64 1.64 16 2 N -0.73 -9.05 5.68 -72.07 -0.41 -9.45 16 3 C 0.73 10.87 8.68 -86.92 -0.75 10.12 16 4 O -0.60 -10.56 17.18 5.28 0.09 -10.47 16 5 N -0.59 -7.95 6.12 27.64 0.17 -7.78 16 6 N -0.30 -4.09 9.46 35.09 0.33 -3.76 16 7 C 0.19 2.49 7.10 -79.74 -0.57 1.92 16 8 C -0.16 -1.54 9.03 36.00 0.33 -1.21 16 9 C -0.17 -2.60 5.87 -105.01 -0.62 -3.22 16 10 C -0.02 -0.37 9.57 -39.19 -0.37 -0.74 16 11 C -0.24 -4.82 9.15 -39.46 -0.36 -5.18 16 12 C 0.17 3.69 6.65 -38.96 -0.26 3.43 16 13 O -0.16 -4.35 9.75 0.41 0.00 -4.34 16 14 C -0.39 -10.19 9.48 30.88 0.29 -9.89 16 15 H 0.10 2.32 5.19 -52.49 -0.27 2.04 16 16 C 0.04 1.06 5.49 -17.52 -0.10 0.96 16 17 N -0.85 -23.56 13.67 55.48 0.76 -22.80 16 18 Si 0.94 19.22 29.55 -169.99 -5.02 14.20 16 19 H -0.26 -5.15 7.11 56.52 0.40 -4.74 16 20 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 21 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 22 C -0.20 -3.67 9.97 -39.46 -0.39 -4.06 16 23 C -0.04 -0.63 9.35 -39.18 -0.37 -1.00 16 24 H 0.06 0.56 8.14 -51.93 -0.42 0.13 16 25 H 0.06 0.56 8.14 -51.93 -0.42 0.13 16 26 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 27 H 0.41 4.77 7.87 -40.82 -0.32 4.45 16 28 H 0.40 4.68 6.53 -182.60 -1.19 3.49 16 29 H 0.08 0.74 8.14 -51.93 -0.42 0.31 16 30 H 0.06 0.57 6.35 -51.93 -0.33 0.24 16 31 H 0.09 0.77 6.46 -51.93 -0.34 0.44 16 32 H 0.12 1.79 7.55 -52.49 -0.40 1.40 16 33 H 0.13 2.59 5.62 -52.49 -0.29 2.29 16 34 H 0.27 6.88 8.31 -40.82 -0.34 6.54 16 35 H 0.12 2.17 8.06 -52.49 -0.42 1.75 16 36 H 0.12 1.40 6.35 -52.49 -0.33 1.06 16 LS Contribution 314.63 15.07 4.74 4.74 Total: -1.00 -30.85 314.63 -6.59 -37.44 By element: Atomic # 1 Polarization: 14.17 SS G_CDS: -4.72 Total: 9.44 kcal Atomic # 6 Polarization: -4.69 SS G_CDS: -2.53 Total: -7.22 kcal Atomic # 7 Polarization: -44.64 SS G_CDS: 0.85 Total: -43.79 kcal Atomic # 8 Polarization: -14.91 SS G_CDS: 0.09 Total: -14.81 kcal Atomic # 14 Polarization: 19.22 SS G_CDS: -5.02 Total: 14.20 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -30.85 -6.59 -37.44 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000920377337.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.728 kcal (2) G-P(sol) polarization free energy of solvation -30.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.878 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.440 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds