Wall clock time and date at job start Mon Mar 30 2020 02:14:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47384 * 2 1 4 4 H 1.08999 * 109.47391 * 185.66208 * 3 2 1 5 5 C 1.53002 * 109.47114 * 305.66734 * 3 2 1 6 6 C 1.53000 * 109.46753 * 294.06568 * 5 3 2 7 7 F 1.39907 * 109.47388 * 67.15308 * 6 5 3 8 8 F 1.39901 * 109.47332 * 187.15140 * 6 5 3 9 9 C 1.53003 * 109.47050 * 65.66601 * 3 2 1 10 10 N 1.46894 * 109.47161 * 64.99881 * 9 3 2 11 11 C 1.47441 * 111.00066 * 69.87718 * 10 9 3 12 12 C 1.54324 * 107.23448 * 123.25560 * 11 10 9 13 13 C 1.55137 * 103.01924 * 22.28592 * 12 11 10 14 14 O 1.42903 * 110.99173 * 82.47399 * 13 12 11 15 15 C 1.50695 * 110.98964 * 206.25607 * 13 12 11 16 16 H 1.08001 * 120.00242 * 118.54268 * 15 13 12 17 17 C 1.37876 * 119.99881 * 298.54669 * 15 13 12 18 18 N 1.31513 * 120.00057 * 359.97438 * 17 15 13 19 19 Si 1.86801 * 120.00044 * 180.02562 * 17 15 13 20 20 H 1.48499 * 109.47264 * 359.97438 * 19 17 15 21 21 H 1.48502 * 109.47320 * 119.99633 * 19 17 15 22 22 H 1.48500 * 109.47099 * 239.99885 * 19 17 15 23 23 C 1.47851 * 111.00118 * 190.71878 * 10 9 3 24 24 H 1.08999 * 109.46982 * 299.67464 * 1 2 3 25 25 H 1.08998 * 109.47432 * 179.67174 * 1 2 3 26 26 H 1.09004 * 109.46836 * 59.67406 * 1 2 3 27 27 H 1.08999 * 109.46622 * 120.00121 * 2 1 3 28 28 H 1.09000 * 109.47298 * 239.99572 * 2 1 3 29 29 H 1.08999 * 109.47022 * 54.06387 * 5 3 2 30 30 H 1.08991 * 109.46871 * 174.07222 * 5 3 2 31 31 H 1.08995 * 109.47490 * 307.15673 * 6 5 3 32 32 H 1.08994 * 109.47202 * 185.00265 * 9 3 2 33 33 H 1.09005 * 109.46928 * 304.99934 * 9 3 2 34 34 H 1.09002 * 109.89096 * 242.66253 * 11 10 9 35 35 H 1.09004 * 109.88783 * 3.84713 * 11 10 9 36 36 H 1.09004 * 110.69988 * 140.66670 * 12 11 10 37 37 H 1.09000 * 110.70228 * 263.89828 * 12 11 10 38 38 H 0.96697 * 113.99718 * 61.45423 * 14 13 12 39 39 H 0.97002 * 119.99533 * 180.02562 * 18 17 15 40 40 H 1.09007 * 110.36806 * 332.46651 * 23 10 9 41 41 H 1.08998 * 110.37797 * 94.80559 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 3.1253 1.4441 -0.1014 5 6 1.4171 2.2037 -1.1719 6 6 1.9257 1.6159 -2.4898 7 9 1.4301 0.3165 -2.6429 8 9 1.4876 2.4105 -3.5547 9 6 1.6497 2.1214 1.3144 10 7 2.3432 1.4640 2.4300 11 6 3.7890 1.7513 2.3963 12 6 4.1599 2.3899 3.7513 13 6 3.0207 1.9087 4.6880 14 8 3.2810 0.5907 5.1753 15 6 2.8163 2.8723 5.8285 16 1 1.8685 3.3764 5.9462 17 6 3.8394 3.1103 6.7216 18 7 4.9934 2.4960 6.5785 19 14 3.5858 4.3042 8.1357 20 1 2.2095 4.8586 8.0748 21 1 3.7765 3.5923 9.4249 22 1 4.5700 5.4114 8.0313 23 6 1.8035 1.9166 3.7299 24 1 -0.3633 0.5088 0.8929 25 1 -0.3634 -1.0276 -0.0059 26 1 -0.3633 0.5189 -0.8871 27 1 1.8932 -0.5139 0.8900 28 1 1.8934 -0.5139 -0.8899 29 1 0.3318 2.1128 -1.1284 30 1 1.6964 3.2555 -1.1115 31 1 3.0153 1.5903 -2.4798 32 1 1.9343 3.1730 1.2787 33 1 0.5722 2.0414 1.4586 34 1 4.3478 0.8259 2.2571 35 1 4.0102 2.4460 1.5860 36 1 5.1256 2.0226 4.0988 37 1 4.1641 3.4773 3.6766 38 1 4.0890 0.5184 5.7015 39 1 5.7130 2.6633 7.2072 40 1 1.3965 2.9240 3.6417 41 1 1.0375 1.2266 4.0838 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000595557200.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:14:15 Heat of formation + Delta-G solvation = -164.874630 kcal Electronic energy + Delta-G solvation = -22866.772766 eV Core-core repulsion = 19223.608488 eV Total energy + Delta-G solvation = -3643.164277 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 277.159 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.06561 -47.06762 -38.84684 -36.78585 -34.17559 -32.14249 -30.65692 -29.87353 -28.19293 -26.84477 -24.55050 -23.86826 -22.95743 -20.44464 -19.55686 -18.85190 -17.71833 -17.27610 -17.01024 -16.21649 -15.52865 -15.06960 -14.89252 -14.65038 -14.30963 -13.88705 -13.78692 -13.42106 -13.24590 -12.79838 -12.67067 -12.31952 -12.16089 -12.01698 -11.95499 -11.58902 -11.31828 -11.23719 -11.11254 -10.89686 -10.78855 -10.48624 -10.41797 -10.37365 -10.25991 -10.07387 -9.82906 -9.18852 -8.61312 -8.08247 -7.59257 -6.22636 -4.30760 3.19263 3.28269 3.32201 3.70150 4.10689 4.27748 4.38919 4.47637 4.78249 4.98129 5.05212 5.11570 5.21194 5.44479 5.59770 5.61876 5.68190 5.73084 5.74563 5.84117 5.98275 6.03039 6.10309 6.15021 6.26190 6.35995 6.45991 6.52736 6.63066 6.69391 6.86488 7.06726 7.40762 7.48386 7.63147 7.77280 7.82272 8.16276 8.71976 9.38170 9.51390 10.84238 Molecular weight = 277.16amu Principal moments of inertia in cm(-1) A = 0.036666 B = 0.003797 C = 0.003716 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 763.456969 B = 7371.959409 C = 7532.528595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.123 4.123 3 C -0.080 4.080 4 H 0.074 0.926 5 C -0.172 4.172 6 C 0.262 3.738 7 F -0.200 7.200 8 F -0.212 7.212 9 C 0.056 3.944 10 N -0.522 5.522 11 C 0.043 3.957 12 C -0.144 4.144 13 C 0.252 3.748 14 O -0.579 6.579 15 C -0.536 4.536 16 H 0.061 0.939 17 C 0.072 3.928 18 N -0.894 5.894 19 Si 0.898 3.102 20 H -0.272 1.272 21 H -0.282 1.282 22 H -0.283 1.283 23 C 0.060 3.940 24 H 0.055 0.945 25 H 0.049 0.951 26 H 0.048 0.952 27 H 0.081 0.919 28 H 0.065 0.935 29 H 0.093 0.907 30 H 0.091 0.909 31 H 0.107 0.893 32 H 0.029 0.971 33 H 0.072 0.928 34 H 0.064 0.936 35 H 0.035 0.965 36 H 0.076 0.924 37 H 0.053 0.947 38 H 0.376 0.624 39 H 0.265 0.735 40 H 0.045 0.955 41 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.878 -0.862 -14.596 15.127 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.160 4.160 3 C -0.099 4.099 4 H 0.092 0.908 5 C -0.210 4.210 6 C 0.209 3.791 7 F -0.182 7.182 8 F -0.194 7.194 9 C -0.073 4.073 10 N -0.246 5.246 11 C -0.085 4.085 12 C -0.183 4.183 13 C 0.211 3.789 14 O -0.386 6.386 15 C -0.575 4.575 16 H 0.079 0.921 17 C -0.131 4.131 18 N -0.534 5.534 19 Si 0.726 3.274 20 H -0.197 1.197 21 H -0.208 1.208 22 H -0.209 1.209 23 C -0.067 4.067 24 H 0.074 0.926 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.100 0.900 28 H 0.083 0.917 29 H 0.111 0.889 30 H 0.109 0.891 31 H 0.125 0.875 32 H 0.047 0.953 33 H 0.090 0.910 34 H 0.082 0.918 35 H 0.053 0.947 36 H 0.095 0.905 37 H 0.072 0.928 38 H 0.225 0.775 39 H 0.075 0.925 40 H 0.063 0.937 41 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -4.374 -1.552 -14.929 15.634 hybrid contribution 0.597 1.784 1.044 2.152 sum -3.777 0.233 -13.885 14.391 Atomic orbital electron populations 1.21827 0.96456 1.01240 1.01134 1.21631 0.95885 0.95408 1.03102 1.21107 1.00095 0.95927 0.92794 0.90775 1.22819 1.03957 1.01544 0.92702 1.21973 0.98165 0.73925 0.85061 1.92949 1.90121 1.39043 1.96071 1.92969 1.92048 1.74412 1.59953 1.22250 0.99278 0.94909 0.90847 1.63539 1.03156 1.55796 1.02114 1.22859 0.88802 0.98717 0.98089 1.23252 1.02295 0.99151 0.93646 1.19526 0.88274 0.81335 0.89738 1.86145 1.48523 1.31049 1.72902 1.21596 0.99387 1.25070 1.11412 0.92125 1.24993 0.94800 0.95662 0.97601 1.69748 1.03502 1.42925 1.37210 0.86442 0.78309 0.80665 0.81999 1.19700 1.20764 1.20941 1.22974 0.98590 0.97472 0.87704 0.92553 0.93237 0.93288 0.89992 0.91684 0.88872 0.89086 0.87522 0.95277 0.90997 0.91811 0.94683 0.90516 0.92777 0.77472 0.92459 0.93698 0.91200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.77 8.99 37.16 0.33 -1.43 16 2 C -0.12 -1.54 5.04 -26.73 -0.13 -1.67 16 3 C -0.08 -0.96 2.12 -90.62 -0.19 -1.15 16 4 H 0.07 0.89 7.03 -51.93 -0.37 0.52 16 5 C -0.17 -1.69 4.69 -26.73 -0.13 -1.81 16 6 C 0.26 2.53 5.22 37.16 0.19 2.72 16 7 F -0.20 -2.28 13.79 2.25 0.03 -2.24 16 8 F -0.21 -2.36 17.34 2.25 0.04 -2.32 16 9 C 0.06 0.81 3.80 -3.83 -0.01 0.80 16 10 N -0.52 -9.54 4.52 -231.24 -1.05 -10.59 16 11 C 0.04 0.80 6.13 -2.83 -0.02 0.79 16 12 C -0.14 -3.25 5.37 -24.91 -0.13 -3.38 16 13 C 0.25 6.14 0.87 -89.64 -0.08 6.07 16 14 O -0.58 -14.98 13.16 -35.23 -0.46 -15.45 16 15 C -0.54 -14.23 8.27 -34.44 -0.28 -14.51 16 16 H 0.06 1.61 7.79 -52.49 -0.41 1.20 16 17 C 0.07 1.88 5.29 -17.82 -0.09 1.79 16 18 N -0.89 -23.64 10.75 55.43 0.60 -23.04 16 19 Si 0.90 20.46 29.54 -169.99 -5.02 15.44 16 20 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 21 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 22 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 23 C 0.06 1.27 5.86 -2.29 -0.01 1.25 16 24 H 0.06 0.70 6.50 -51.93 -0.34 0.36 16 25 H 0.05 0.57 8.14 -51.93 -0.42 0.14 16 26 H 0.05 0.54 5.69 -51.93 -0.30 0.24 16 27 H 0.08 1.22 7.60 -51.93 -0.39 0.82 16 28 H 0.06 0.77 5.95 -51.93 -0.31 0.46 16 29 H 0.09 0.93 5.99 -51.93 -0.31 0.61 16 30 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 31 H 0.11 0.80 8.13 -51.93 -0.42 0.37 16 32 H 0.03 0.43 7.96 -51.93 -0.41 0.01 16 33 H 0.07 1.02 6.31 -51.93 -0.33 0.69 16 34 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 35 H 0.03 0.58 6.94 -51.93 -0.36 0.22 16 36 H 0.08 1.84 7.54 -51.93 -0.39 1.45 16 37 H 0.05 1.25 8.03 -51.93 -0.42 0.83 16 38 H 0.38 9.82 7.56 45.56 0.34 10.17 16 39 H 0.27 6.71 8.31 -40.82 -0.34 6.38 16 40 H 0.04 0.93 7.70 -51.93 -0.40 0.53 16 41 H 0.07 1.52 8.14 -51.93 -0.42 1.10 16 LS Contribution 319.63 15.07 4.82 4.82 Total: -1.00 -27.20 319.63 -7.24 -34.44 By element: Atomic # 1 Polarization: 15.12 SS G_CDS: -5.63 Total: 9.49 kcal Atomic # 6 Polarization: -9.98 SS G_CDS: -0.56 Total: -10.54 kcal Atomic # 7 Polarization: -33.18 SS G_CDS: -0.45 Total: -33.63 kcal Atomic # 8 Polarization: -14.98 SS G_CDS: -0.46 Total: -15.45 kcal Atomic # 9 Polarization: -4.63 SS G_CDS: 0.07 Total: -4.56 kcal Atomic # 14 Polarization: 20.46 SS G_CDS: -5.02 Total: 15.44 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -27.20 -7.24 -34.44 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000595557200.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.432 kcal (2) G-P(sol) polarization free energy of solvation -27.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.633 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds