Wall clock time and date at job start Mon Mar 30 2020 01:56:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42905 * 114.00139 * 2 1 4 4 C 1.53001 * 109.47414 * 180.02562 * 3 2 1 5 5 N 1.46507 * 109.47112 * 64.99516 * 4 3 2 6 6 C 1.36931 * 120.00333 * 264.84758 * 5 4 3 7 7 H 1.08005 * 119.99985 * 146.19854 * 6 5 4 8 8 C 1.38812 * 120.00131 * 326.20550 * 6 5 4 9 9 N 1.31624 * 119.99752 * 337.53992 * 8 6 5 10 10 Si 1.86795 * 120.00391 * 157.54746 * 8 6 5 11 11 H 1.48505 * 109.47139 * 59.99677 * 10 8 6 12 12 H 1.48494 * 109.47348 * 179.97438 * 10 8 6 13 13 H 1.48499 * 109.47164 * 299.99821 * 10 8 6 14 14 C 1.46507 * 119.99391 * 84.85116 * 5 4 3 15 15 C 1.52996 * 109.47085 * 89.99967 * 14 5 4 16 16 H 1.09002 * 109.47436 * 54.99832 * 15 14 5 17 17 C 1.52995 * 109.47065 * 174.99468 * 15 14 5 18 18 C 1.52998 * 109.47432 * 179.97438 * 17 15 14 19 19 C 1.53004 * 109.47250 * 300.00256 * 18 17 15 20 20 C 1.53007 * 109.46826 * 59.99379 * 19 18 17 21 21 F 1.39902 * 109.46823 * 60.00795 * 20 19 18 22 22 F 1.39898 * 109.46859 * 180.02562 * 20 19 18 23 23 C 1.52996 * 109.47347 * 300.00338 * 20 19 18 24 24 H 1.09002 * 109.47136 * 59.99857 * 1 2 3 25 25 H 1.09004 * 109.47151 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.47111 * 300.00107 * 1 2 3 27 27 H 1.08997 * 109.47155 * 60.00121 * 3 2 1 28 28 H 1.09000 * 109.47166 * 299.99931 * 3 2 1 29 29 H 1.08999 * 109.46906 * 305.00070 * 4 3 2 30 30 H 1.08997 * 109.47138 * 184.99997 * 4 3 2 31 31 H 0.96996 * 119.99600 * 179.97438 * 9 8 6 32 32 H 1.09003 * 109.46569 * 209.99836 * 14 5 4 33 33 H 1.08999 * 109.46762 * 329.99507 * 14 5 4 34 34 H 1.08999 * 109.47342 * 300.00186 * 17 15 14 35 35 H 1.09006 * 109.47176 * 59.99846 * 17 15 14 36 36 H 1.08993 * 109.47178 * 60.00047 * 18 17 15 37 37 H 1.09001 * 109.47703 * 180.02562 * 18 17 15 38 38 H 1.08998 * 109.47560 * 179.97438 * 19 18 17 39 39 H 1.09002 * 109.46989 * 300.00157 * 19 18 17 40 40 H 1.09002 * 109.46950 * 299.99602 * 23 20 19 41 41 H 1.09000 * 109.46871 * 180.02562 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1847 -0.0006 5 7 3.9757 0.5644 -1.2528 6 6 4.1984 -0.7856 -1.3068 7 1 3.9867 -1.3320 -2.2140 8 6 4.6962 -1.4520 -0.1954 9 7 5.3589 -0.7880 0.7279 10 14 4.4259 -3.2910 -0.0102 11 1 5.0428 -4.0002 -1.1599 12 1 5.0515 -3.7586 1.2527 13 1 2.9689 -3.5762 0.0233 14 6 4.1776 1.3885 -2.4471 15 6 5.6236 1.8872 -2.4840 16 1 6.3029 1.0369 -2.4228 17 6 5.8692 2.6428 -3.7915 18 6 7.3149 3.1421 -3.8283 19 6 7.5613 4.0788 -2.6438 20 6 7.3157 3.3230 -1.3363 21 9 8.1880 2.2321 -1.2573 22 9 7.5404 4.1796 -0.2533 23 6 5.8699 2.8238 -1.2996 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.6886 1.8464 0.8900 28 1 1.6886 1.8464 -0.8900 29 1 3.8514 0.5683 0.8409 30 1 3.9785 2.1765 0.0889 31 1 5.7064 -1.2535 1.5046 32 1 3.9757 0.7933 -3.3376 33 1 3.4996 2.2415 -2.4187 34 1 5.6932 1.9757 -4.6353 35 1 5.1899 3.4931 -3.8528 36 1 7.9945 2.2922 -3.7667 37 1 7.4898 3.6808 -4.7595 38 1 8.5915 4.4341 -2.6697 39 1 6.8817 4.9288 -2.7053 40 1 5.1904 3.6739 -1.3611 41 1 5.6949 2.2859 -0.3679 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000316531818.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:56:09 Heat of formation + Delta-G solvation = -142.091641 kcal Electronic energy + Delta-G solvation = -23595.837399 eV Core-core repulsion = 19953.661067 eV Total energy + Delta-G solvation = -3642.176333 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 277.159 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -48.43257 -46.42241 -38.01382 -36.98490 -35.04134 -31.88242 -30.46502 -29.67551 -28.50699 -25.69002 -25.39387 -23.31525 -22.19976 -21.43465 -19.88471 -19.41729 -16.81339 -16.55599 -16.22675 -15.79786 -15.67354 -15.06390 -14.66705 -14.60512 -13.96991 -13.93892 -13.44411 -13.37917 -13.26332 -12.75631 -12.68768 -12.17077 -12.12936 -11.97361 -11.79770 -11.62234 -11.05772 -10.99801 -10.86750 -10.76710 -10.66362 -10.61495 -10.23907 -10.09088 -10.01400 -9.79378 -9.65174 -9.43512 -8.82289 -8.31620 -6.51199 -5.65841 -3.15630 3.49537 3.54917 3.60370 4.18460 4.58991 4.64081 4.68742 4.73602 4.78059 5.25127 5.30594 5.47280 5.51604 5.57468 5.59311 5.71642 5.78568 5.79403 5.81612 5.95359 6.06558 6.13372 6.14470 6.21929 6.27799 6.32697 6.35298 6.44634 6.50126 6.64073 6.71217 6.83249 6.96899 7.19758 7.71941 7.93619 8.08886 8.63795 9.29850 9.95359 10.48304 11.37312 Molecular weight = 277.16amu Principal moments of inertia in cm(-1) A = 0.017466 B = 0.006459 C = 0.005706 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1602.691486 B = 4333.922968 C = 4906.361835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.356 6.356 3 C 0.045 3.955 4 C 0.136 3.864 5 N -0.574 5.574 6 C -0.240 4.240 7 H 0.057 0.943 8 C 0.015 3.985 9 N -0.891 5.891 10 Si 0.896 3.104 11 H -0.286 1.286 12 H -0.294 1.294 13 H -0.283 1.283 14 C 0.155 3.845 15 C -0.104 4.104 16 H 0.085 0.915 17 C -0.118 4.118 18 C -0.116 4.116 19 C -0.154 4.154 20 C 0.287 3.713 21 F -0.196 7.196 22 F -0.213 7.213 23 C -0.146 4.146 24 H 0.028 0.972 25 H 0.074 0.926 26 H 0.026 0.974 27 H 0.024 0.976 28 H 0.026 0.974 29 H 0.109 0.891 30 H 0.042 0.958 31 H 0.253 0.747 32 H 0.047 0.953 33 H 0.032 0.968 34 H 0.065 0.935 35 H 0.058 0.942 36 H 0.071 0.929 37 H 0.067 0.933 38 H 0.076 0.924 39 H 0.087 0.913 40 H 0.073 0.927 41 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.322 9.843 -5.994 11.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.273 6.273 3 C -0.034 4.034 4 C 0.009 3.991 5 N -0.294 5.294 6 C -0.370 4.370 7 H 0.075 0.925 8 C -0.184 4.184 9 N -0.534 5.534 10 Si 0.726 3.274 11 H -0.212 1.212 12 H -0.220 1.220 13 H -0.209 1.209 14 C 0.028 3.972 15 C -0.125 4.125 16 H 0.104 0.896 17 C -0.157 4.157 18 C -0.154 4.154 19 C -0.192 4.192 20 C 0.251 3.749 21 F -0.177 7.177 22 F -0.194 7.194 23 C -0.184 4.184 24 H 0.047 0.953 25 H 0.092 0.908 26 H 0.044 0.956 27 H 0.042 0.958 28 H 0.044 0.956 29 H 0.127 0.873 30 H 0.060 0.940 31 H 0.063 0.937 32 H 0.065 0.935 33 H 0.050 0.950 34 H 0.084 0.916 35 H 0.076 0.924 36 H 0.089 0.911 37 H 0.086 0.914 38 H 0.095 0.905 39 H 0.106 0.894 40 H 0.092 0.908 41 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.098 9.593 -5.810 11.269 hybrid contribution -0.251 -0.608 0.381 0.760 sum -1.349 8.985 -5.429 10.584 Atomic orbital electron populations 1.22629 0.84291 1.01454 0.98366 1.88214 1.16530 1.27783 1.94812 1.23457 0.99197 0.84051 0.96737 1.21197 0.87164 0.97093 0.93614 1.43707 1.75545 1.04157 1.05946 1.18836 1.36257 0.82544 0.99366 0.92510 1.24925 0.96897 0.97469 0.99083 1.69937 1.35808 1.35425 1.12266 0.86483 0.78090 0.86091 0.76717 1.21225 1.22004 1.20931 1.20908 0.91253 0.93478 0.91564 1.21822 1.02553 0.97335 0.90812 0.89643 1.21676 0.95125 0.99872 0.98989 1.21492 0.98537 0.99000 0.96380 1.22486 1.03507 0.99537 0.93712 1.21228 0.91107 0.78310 0.84295 1.93002 1.71979 1.56024 1.96702 1.92954 1.95923 1.71474 1.59005 1.22611 0.90947 1.00635 1.04215 0.95341 0.90751 0.95554 0.95779 0.95607 0.87349 0.94020 0.93728 0.93472 0.94962 0.91584 0.92360 0.91065 0.91450 0.90501 0.89441 0.90800 0.87339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 11.01 101.05 1.11 1.61 16 2 O -0.36 -7.86 10.42 -35.23 -0.37 -8.23 16 3 C 0.04 0.90 6.28 37.16 0.23 1.14 16 4 C 0.14 3.09 4.87 -4.04 -0.02 3.07 16 5 N -0.57 -13.58 2.24 -173.23 -0.39 -13.96 16 6 C -0.24 -6.47 9.26 -15.06 -0.14 -6.61 16 7 H 0.06 1.55 7.92 -52.48 -0.42 1.14 16 8 C 0.02 0.43 4.92 -17.43 -0.09 0.34 16 9 N -0.89 -25.54 11.34 55.49 0.63 -24.91 16 10 Si 0.90 22.40 29.61 -169.99 -5.03 17.37 16 11 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 12 H -0.29 -7.41 7.11 56.52 0.40 -7.01 16 13 H -0.28 -7.15 7.11 56.52 0.40 -6.75 16 14 C 0.15 3.02 5.17 -4.04 -0.02 3.00 16 15 C -0.10 -1.86 2.27 -90.63 -0.21 -2.07 16 16 H 0.09 1.86 7.80 -51.93 -0.41 1.45 16 17 C -0.12 -1.62 5.20 -26.73 -0.14 -1.76 16 18 C -0.12 -1.47 5.80 -26.73 -0.16 -1.62 16 19 C -0.15 -2.02 5.45 -26.73 -0.15 -2.16 16 20 C 0.29 4.91 2.10 -26.73 -0.06 4.85 16 21 F -0.20 -3.95 16.03 2.25 0.04 -3.91 16 22 F -0.21 -3.81 17.06 2.25 0.04 -3.77 16 23 C -0.15 -2.61 3.75 -26.74 -0.10 -2.71 16 24 H 0.03 0.43 8.14 -51.93 -0.42 0.00 16 25 H 0.07 1.15 8.14 -51.93 -0.42 0.72 16 26 H 0.03 0.39 8.14 -51.93 -0.42 -0.04 16 27 H 0.02 0.44 8.14 -51.93 -0.42 0.01 16 28 H 0.03 0.49 8.14 -51.93 -0.42 0.06 16 29 H 0.11 2.89 5.34 -51.93 -0.28 2.61 16 30 H 0.04 0.87 5.76 -51.93 -0.30 0.58 16 31 H 0.25 7.15 8.31 -40.82 -0.34 6.81 16 32 H 0.05 0.92 8.04 -51.93 -0.42 0.50 16 33 H 0.03 0.57 8.07 -51.93 -0.42 0.15 16 34 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 35 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 36 H 0.07 0.99 7.80 -51.93 -0.41 0.58 16 37 H 0.07 0.69 8.14 -51.93 -0.42 0.26 16 38 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 39 H 0.09 0.99 8.14 -51.93 -0.42 0.57 16 40 H 0.07 1.15 8.14 -51.93 -0.42 0.73 16 41 H 0.11 2.36 5.79 -51.93 -0.30 2.05 16 LS Contribution 328.51 15.07 4.95 4.95 Total: -1.00 -29.77 328.51 -6.58 -36.35 By element: Atomic # 1 Polarization: 5.76 SS G_CDS: -6.73 Total: -0.96 kcal Atomic # 6 Polarization: -3.19 SS G_CDS: 0.28 Total: -2.92 kcal Atomic # 7 Polarization: -39.11 SS G_CDS: 0.24 Total: -38.87 kcal Atomic # 8 Polarization: -7.86 SS G_CDS: -0.37 Total: -8.23 kcal Atomic # 9 Polarization: -7.76 SS G_CDS: 0.07 Total: -7.68 kcal Atomic # 14 Polarization: 22.40 SS G_CDS: -5.03 Total: 17.37 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -29.77 -6.58 -36.35 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000316531818.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.746 kcal (2) G-P(sol) polarization free energy of solvation -29.765 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds