Wall clock time and date at job start Mon Mar 30 2020 02:07:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31516 * 1 3 3 Si 1.86800 * 119.99710 * 2 1 4 4 H 1.48501 * 109.46758 * 90.00167 * 3 2 1 5 5 H 1.48499 * 109.47026 * 210.00015 * 3 2 1 6 6 H 1.48496 * 109.47474 * 330.00050 * 3 2 1 7 7 C 1.37871 * 119.99826 * 180.27590 * 2 1 3 8 8 H 1.07998 * 120.00063 * 179.72354 * 7 2 1 9 9 C 1.50706 * 120.00434 * 359.72891 * 7 2 1 10 10 N 1.46500 * 109.47299 * 180.02562 * 9 7 2 11 11 C 1.34596 * 126.44081 * 124.99706 * 10 9 7 12 12 N 1.31068 * 106.67789 * 179.97438 * 11 10 9 13 13 N 1.28842 * 107.99302 * 359.97438 * 12 11 10 14 14 N 1.28741 * 109.39409 * 359.73530 * 13 12 11 15 15 H 0.97000 * 120.00236 * 180.02562 * 1 2 3 16 16 H 1.09004 * 109.46434 * 299.99667 * 9 7 2 17 17 H 1.08993 * 109.47348 * 59.99490 * 9 7 2 18 18 H 1.07999 * 126.65750 * 359.96522 * 11 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2491 1.6178 0.0000 4 1 2.4966 2.0464 1.4001 5 1 3.5466 1.4403 -0.7000 6 1 1.4466 2.6527 -0.7000 7 6 2.0045 -1.1940 -0.0057 8 1 3.0845 -1.1940 -0.0103 9 6 1.2510 -2.4992 -0.0059 10 7 2.2030 -3.6127 -0.0119 11 6 2.2539 -4.6259 0.8727 12 7 3.2469 -5.3977 0.5039 13 7 3.7780 -4.8856 -0.5524 14 7 3.1459 -3.8100 -0.8702 15 1 -0.4850 -0.8400 0.0004 16 1 0.6281 -2.5591 0.8866 17 1 0.6207 -2.5548 -0.8933 18 1 1.6028 -4.7740 1.7216 RHF calculation, no. of doubly occupied orbitals= 27 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000143407629.mol2 18 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:07:54 Heat of formation + Delta-G solvation = 83.403673 kcal Electronic energy + Delta-G solvation = -7894.746204 eV Core-core repulsion = 6155.971544 eV Total energy + Delta-G solvation = -1738.774660 eV No. of doubly occupied orbitals = 27 Molecular weight (most abundant/longest-lived isotopes) = 154.055 amu Computer time = 0.07 seconds Orbital eigenvalues (eV) -45.04359 -37.10224 -34.89677 -33.32180 -29.74681 -26.04234 -24.61853 -23.63360 -19.59023 -18.38474 -17.65592 -16.64420 -15.69649 -15.07650 -14.80263 -13.70846 -13.63881 -12.99283 -12.63812 -12.17426 -12.07366 -11.98249 -11.40680 -10.90306 -10.71403 -8.88057 -6.66288 0.44296 1.25002 1.36399 1.53669 1.59324 1.80231 2.44967 2.95387 3.49041 3.62455 4.28822 4.41568 4.52662 4.89543 5.31199 5.43232 5.95430 6.31376 7.06924 7.65872 8.53957 Molecular weight = 154.05amu Principal moments of inertia in cm(-1) A = 0.111587 B = 0.015806 C = 0.014583 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 250.864024 B = 1771.017686 C = 1919.592940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.915 5.915 2 C -0.005 4.005 3 Si 1.118 2.882 4 H -0.267 1.267 5 H -0.282 1.282 6 H -0.276 1.276 7 C -0.637 4.637 8 H 0.047 0.953 9 C 0.237 3.763 10 N -0.279 5.279 11 C 0.160 3.840 12 N -0.339 5.339 13 N -0.123 5.123 14 N -0.116 5.116 15 H 0.267 0.733 16 H 0.085 0.915 17 H 0.046 0.954 18 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.149 -2.494 3.215 4.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.550 5.550 2 C -0.207 4.207 3 Si 0.939 3.061 4 H -0.192 1.192 5 H -0.208 1.208 6 H -0.201 1.201 7 C -0.675 4.675 8 H 0.065 0.935 9 C 0.118 3.882 10 N -0.081 5.081 11 C -0.137 4.137 12 N -0.190 5.190 13 N -0.117 5.117 14 N -0.104 5.104 15 H 0.077 0.923 16 H 0.103 0.897 17 H 0.064 0.936 18 H 0.295 0.705 Dipole moment (debyes) X Y Z Total from point charges 0.699 -1.239 2.381 2.774 hybrid contribution -0.707 -1.393 0.402 1.613 sum -0.007 -2.632 2.783 3.831 Atomic orbital electron populations 1.70928 1.07321 1.30707 1.46068 1.27096 0.96329 1.05672 0.91639 0.82872 0.73864 0.71220 0.78131 1.19228 1.20801 1.20060 1.22219 0.94800 0.91804 1.58678 0.93468 1.20122 0.86277 0.81206 1.00547 1.49040 1.22031 1.20185 1.16797 1.28500 1.00043 0.85570 0.99620 1.74759 1.09139 1.26139 1.08939 1.78468 1.21147 1.02874 1.09247 1.78821 1.00601 1.14143 1.16790 0.92304 0.89710 0.93600 0.70477 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.92 -48.65 13.65 21.45 0.29 -48.36 13 2 C -0.01 -0.28 5.46 84.65 0.46 0.18 13 3 Si 1.12 46.31 29.90 68.60 2.05 48.36 13 4 H -0.27 -10.32 7.11 99.48 0.71 -9.61 13 5 H -0.28 -11.52 7.11 99.48 0.71 -10.81 13 6 H -0.28 -11.20 7.11 99.48 0.71 -10.49 13 7 C -0.64 -32.73 9.20 25.60 0.24 -32.49 13 8 H 0.05 2.59 7.81 -2.91 -0.02 2.57 13 9 C 0.24 10.36 5.55 85.64 0.48 10.84 13 10 N -0.28 -11.61 3.43 -355.56 -1.22 -12.83 13 11 C 0.16 5.38 12.79 180.27 2.31 7.68 13 12 N -0.34 -13.29 12.36 -60.30 -0.75 -14.03 13 13 N -0.12 -5.50 13.43 37.01 0.50 -5.00 13 14 N -0.12 -5.40 13.07 37.02 0.48 -4.92 13 15 H 0.27 13.68 7.22 -92.71 -0.67 13.01 13 16 H 0.09 3.29 7.95 -2.39 -0.02 3.27 13 17 H 0.05 2.08 8.00 -2.39 -0.02 2.06 13 18 H 0.28 5.64 8.06 -2.91 -0.02 5.62 13 Total: -1.00 -61.17 179.21 6.21 -54.96 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: 1.37 Total: -4.39 kcal Atomic # 6 Polarization: -17.27 SS G_CDS: 3.48 Total: -13.79 kcal Atomic # 7 Polarization: -84.45 SS G_CDS: -0.69 Total: -85.14 kcal Atomic # 14 Polarization: 46.31 SS G_CDS: 2.05 Total: 48.36 kcal Total: -61.17 6.21 -54.96 kcal The number of atoms in the molecule is 18 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000143407629.mol2 18 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 138.368 kcal (2) G-P(sol) polarization free energy of solvation -61.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.964 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.07 seconds