Wall clock time and date at job start Mon Mar 30 2020 02:16:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.39180 * 124.28277 * 2 1 4 4 C 1.31430 * 112.35002 * 179.97438 * 3 2 1 5 5 C 1.39104 * 126.64506 * 180.02562 * 4 3 2 6 6 H 1.08003 * 119.99910 * 174.24888 * 5 4 3 7 7 C 1.40588 * 120.00208 * 354.24347 * 5 4 3 8 8 N 1.30550 * 119.99554 * 6.03413 * 7 5 4 9 9 Si 1.86795 * 119.99901 * 186.02798 * 7 5 4 10 10 H 1.48504 * 109.47096 * 94.98783 * 9 7 5 11 11 H 1.48502 * 109.47020 * 214.98644 * 9 7 5 12 12 H 1.48502 * 109.47430 * 334.98349 * 9 7 5 13 13 C 1.51450 * 106.70451 * 0.02562 * 4 3 2 14 14 C 1.35115 * 124.24421 * 179.90519 * 2 1 3 15 15 O 1.21288 * 127.31030 * 0.02562 * 14 2 1 16 16 H 1.09000 * 109.47434 * 359.97173 * 1 2 3 17 17 H 1.09000 * 109.47188 * 119.97230 * 1 2 3 18 18 H 1.09009 * 109.46812 * 239.97032 * 1 2 3 19 19 H 0.97003 * 119.99779 * 179.97438 * 8 7 5 20 20 H 1.09001 * 110.56042 * 118.57766 * 13 4 3 21 21 H 1.09004 * 110.56035 * 241.27115 * 13 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2490 1.1500 0.0000 4 6 3.5349 0.8782 0.0005 5 6 4.5779 1.7986 0.0012 6 1 5.5985 1.4580 0.0953 7 6 4.3037 3.1720 -0.1208 8 7 3.0682 3.5938 -0.1161 9 14 5.7070 4.3933 -0.2894 10 1 5.9481 4.6749 -1.7274 11 1 5.3521 5.6546 0.4094 12 1 6.9365 3.8212 0.3159 13 6 3.6608 -0.6310 0.0003 14 6 2.2253 -1.1169 0.0018 15 8 1.8416 -2.2675 0.0033 16 1 -0.3634 1.0276 0.0005 17 1 -0.3633 -0.5134 -0.8902 18 1 -0.3633 -0.5143 0.8898 19 1 2.8790 4.5415 -0.1999 20 1 4.1796 -0.9717 -0.8957 21 1 4.1811 -0.9718 0.8955 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000082410833.mol2 21 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:16:46 Heat of formation + Delta-G solvation = 4.640747 kcal Electronic energy + Delta-G solvation = -9326.164360 eV Core-core repulsion = 7396.143914 eV Total energy + Delta-G solvation = -1930.020447 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 168.064 amu Computer time = 0.08 seconds Orbital eigenvalues (eV) -39.21418 -35.87141 -33.72820 -31.62838 -27.47875 -27.12342 -24.49278 -20.10641 -19.19787 -16.58688 -15.57058 -15.02181 -14.80713 -13.73327 -13.21291 -12.78344 -12.72453 -11.76692 -11.69458 -11.29976 -11.26248 -10.74013 -10.32064 -10.13127 -9.27644 -9.18038 -8.02033 -7.36142 -6.68228 -4.66695 2.90899 3.06803 3.09961 3.27657 3.89377 4.07019 4.12720 5.16061 5.43556 5.82304 6.07385 6.13826 6.34484 6.37334 6.45229 7.00081 7.35415 7.60968 8.15682 8.54730 8.78719 9.17489 9.95361 10.23300 Molecular weight = 168.06amu Principal moments of inertia in cm(-1) A = 0.091528 B = 0.014590 C = 0.012712 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 305.845038 B = 1918.680355 C = 2202.140303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.125 3.875 2 N -0.468 5.468 3 N -0.354 5.354 4 C 0.193 3.807 5 C -0.422 4.422 6 H 0.091 0.909 7 C 0.070 3.930 8 N -0.735 5.735 9 Si 0.917 3.083 10 H -0.270 1.270 11 H -0.277 1.277 12 H -0.260 1.260 13 C -0.164 4.164 14 C 0.467 3.533 15 O -0.573 6.573 16 H 0.079 0.921 17 H 0.047 0.953 18 H 0.048 0.952 19 H 0.279 0.721 20 H 0.103 0.897 21 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.685 1.052 -0.192 1.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.018 4.018 2 N -0.281 5.281 3 N -0.178 5.178 4 C 0.031 3.969 5 C -0.462 4.462 6 H 0.109 0.891 7 C -0.155 4.155 8 N -0.360 5.360 9 Si 0.741 3.259 10 H -0.195 1.195 11 H -0.202 1.202 12 H -0.184 1.184 13 C -0.206 4.206 14 C 0.254 3.746 15 O -0.454 6.454 16 H 0.098 0.902 17 H 0.066 0.934 18 H 0.066 0.934 19 H 0.090 0.910 20 H 0.121 0.879 21 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 0.427 1.244 -0.194 1.329 hybrid contribution 1.033 -0.078 -0.102 1.041 sum 1.459 1.166 -0.296 1.891 Atomic orbital electron populations 1.21133 0.78406 1.02368 0.99891 1.50004 1.06083 1.05354 1.66677 1.77560 1.02134 0.99475 1.38634 1.21363 0.92674 0.89108 0.93796 1.18467 0.92894 0.89768 1.45044 0.89108 1.26047 0.96543 0.99364 0.93557 1.69828 1.19783 1.16500 1.29937 0.86161 0.81262 0.79343 0.79172 1.19476 1.20177 1.18422 1.21812 0.95775 0.98979 1.04079 1.21658 0.89782 0.85339 0.77839 1.90573 1.80489 1.19225 1.55140 0.90217 0.93405 0.93367 0.90969 0.87871 0.87969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.13 2.57 11.21 59.85 0.67 3.24 14 2 N -0.47 -11.79 3.94 -66.67 -0.26 -12.06 14 3 N -0.35 -9.72 10.43 33.80 0.35 -9.36 14 4 C 0.19 5.03 6.99 -82.07 -0.57 4.46 14 5 C -0.42 -10.54 9.38 -38.37 -0.36 -10.90 14 6 H 0.09 2.05 7.86 -52.48 -0.41 1.64 14 7 C 0.07 1.70 5.50 -17.21 -0.09 1.61 14 8 N -0.74 -19.05 11.96 55.58 0.67 -18.38 14 9 Si 0.92 17.66 29.57 -169.99 -5.03 12.63 14 10 H -0.27 -5.16 7.11 56.52 0.40 -4.76 14 11 H -0.28 -5.27 7.11 56.52 0.40 -4.87 14 12 H -0.26 -4.87 7.11 56.52 0.40 -4.47 14 13 C -0.16 -3.77 6.86 -28.25 -0.19 -3.97 14 14 C 0.47 11.76 8.40 -10.41 -0.09 11.67 14 15 O -0.57 -15.22 17.87 5.55 0.10 -15.12 14 16 H 0.08 1.55 8.14 -51.93 -0.42 1.13 14 17 H 0.05 0.90 8.14 -51.93 -0.42 0.48 14 18 H 0.05 0.91 8.14 -51.92 -0.42 0.48 14 19 H 0.28 6.53 8.29 -40.82 -0.34 6.19 14 20 H 0.10 2.16 8.14 -51.93 -0.42 1.73 14 21 H 0.10 2.13 8.14 -51.93 -0.42 1.71 14 LS Contribution 200.30 15.07 3.02 3.02 Total: -1.00 -30.43 200.30 -3.45 -33.89 By element: Atomic # 1 Polarization: 0.93 SS G_CDS: -1.66 Total: -0.73 kcal Atomic # 6 Polarization: 6.76 SS G_CDS: -0.64 Total: 6.12 kcal Atomic # 7 Polarization: -40.56 SS G_CDS: 0.75 Total: -39.81 kcal Atomic # 8 Polarization: -15.22 SS G_CDS: 0.10 Total: -15.12 kcal Atomic # 14 Polarization: 17.66 SS G_CDS: -5.03 Total: 12.63 kcal Total LS contribution 3.02 Total: 3.02 kcal Total: -30.43 -3.45 -33.89 kcal The number of atoms in the molecule is 21 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000082410833.mol2 21 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.528 kcal (2) G-P(sol) polarization free energy of solvation -30.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.453 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.888 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.08 seconds