Wall clock time and date at job start Mon Mar 30 2020 01:51:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30620 * 1 3 3 Si 1.86803 * 120.00228 * 2 1 4 4 H 1.48498 * 109.47169 * 269.99695 * 3 2 1 5 5 H 1.48497 * 109.47209 * 29.99601 * 3 2 1 6 6 H 1.48504 * 109.47007 * 150.00164 * 3 2 1 7 7 C 1.40340 * 119.99758 * 179.97438 * 2 1 3 8 8 H 1.08002 * 119.99782 * 180.02562 * 7 2 1 9 9 C 1.39801 * 120.00203 * 0.02562 * 7 2 1 10 10 N 1.32810 * 125.79774 * 179.97438 * 9 7 2 11 11 C 1.33065 * 108.64417 * 179.76423 * 10 9 7 12 12 C 1.50705 * 126.00846 * 180.30532 * 11 10 9 13 13 F 1.39905 * 109.46848 * 270.15720 * 12 11 10 14 14 C 1.35931 * 107.98427 * 0.44028 * 11 10 9 15 15 O 1.34596 * 107.35600 * 359.56576 * 14 11 10 16 16 H 0.97002 * 119.99610 * 0.02562 * 1 2 3 17 17 H 1.08998 * 109.47210 * 30.15532 * 12 11 10 18 18 H 1.08997 * 109.47293 * 150.15501 * 12 11 10 19 19 H 1.08002 * 126.32545 * 179.83533 * 14 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3062 0.0000 0.0000 3 14 2.2403 1.6177 0.0000 4 1 2.4879 2.0464 -1.4000 5 1 1.4378 2.6527 0.6999 6 1 3.5379 1.4401 0.7000 7 6 2.0079 -1.2154 0.0005 8 1 3.0879 -1.2154 0.0010 9 6 1.3088 -2.4261 0.0005 10 7 1.8533 -3.6375 0.0005 11 6 0.8777 -4.5424 0.0057 12 6 1.0571 -6.0387 0.0141 13 9 1.1161 -6.5086 -1.3024 14 6 -0.3092 -3.8799 -0.0009 15 8 -0.0337 -2.5624 -0.0004 16 1 -0.4850 0.8401 -0.0004 17 1 1.9827 -6.2907 0.5316 18 1 0.2155 -6.5027 0.5282 19 1 -1.2920 -4.3279 -0.0015 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261168581.mol2 19 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:28 Heat of formation + Delta-G solvation = -51.857583 kcal Electronic energy + Delta-G solvation = -9455.384105 eV Core-core repulsion = 7274.423261 eV Total energy + Delta-G solvation = -2180.960844 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 171.044 amu Computer time = 0.10 seconds Orbital eigenvalues (eV) -46.99262 -41.01586 -33.82724 -33.03205 -29.92372 -26.96260 -24.76769 -20.82902 -19.75388 -17.54441 -15.49942 -15.40807 -15.23574 -14.81622 -14.25838 -14.16498 -13.20628 -12.27250 -11.61099 -11.37517 -10.90705 -10.80242 -10.39593 -10.34973 -9.68315 -9.44148 -8.66451 -7.58463 -6.96338 -4.74517 2.84137 3.00643 3.06508 3.22568 3.81160 4.01226 4.79306 5.18725 5.33108 5.46982 5.54703 6.31012 6.52504 6.79041 6.97427 7.54805 7.79445 8.11959 8.46785 8.60501 9.74067 10.06109 Molecular weight = 171.04amu Principal moments of inertia in cm(-1) A = 0.116197 B = 0.012406 C = 0.011576 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 240.912099 B = 2256.382960 C = 2418.172006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.776 5.776 2 C 0.069 3.931 3 Si 0.934 3.066 4 H -0.265 1.265 5 H -0.274 1.274 6 H -0.257 1.257 7 C -0.430 4.430 8 H 0.111 0.889 9 C 0.347 3.653 10 N -0.605 5.605 11 C -0.041 4.041 12 C 0.156 3.844 13 F -0.219 7.219 14 C -0.186 4.186 15 O -0.183 6.183 16 H 0.287 0.713 17 H 0.078 0.922 18 H 0.077 0.923 19 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.356 -1.795 1.114 2.142 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C -0.153 4.153 3 Si 0.757 3.243 4 H -0.190 1.190 5 H -0.199 1.199 6 H -0.181 1.181 7 C -0.465 4.465 8 H 0.129 0.871 9 C 0.163 3.837 10 N -0.339 5.339 11 C -0.166 4.166 12 C 0.101 3.899 13 F -0.201 7.201 14 C -0.261 4.261 15 O -0.075 6.075 16 H 0.098 0.902 17 H 0.097 0.903 18 H 0.095 0.905 19 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 0.109 -1.769 1.087 2.079 hybrid contribution -0.632 0.726 -0.067 0.965 sum -0.523 -1.042 1.020 1.549 Atomic orbital electron populations 1.69704 1.07672 1.30129 1.32839 1.26142 0.95083 1.02098 0.92008 0.85885 0.80101 0.78819 0.79512 1.19017 1.19911 1.18081 1.18414 0.94868 0.85722 1.47480 0.87095 1.22117 0.76664 0.93372 0.91595 1.70784 1.31228 0.98067 1.33798 1.21661 0.91147 0.95807 1.07938 1.19879 1.02723 0.88504 0.78830 1.92747 1.98036 1.89389 1.39888 1.24166 0.98822 0.82778 1.20384 1.84858 1.26755 1.23446 1.72408 0.90217 0.90325 0.90517 0.80571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.78 -20.55 11.98 55.57 0.67 -19.88 13 2 C 0.07 1.76 5.50 -17.28 -0.10 1.66 13 3 Si 0.93 18.42 29.56 -169.99 -5.03 13.39 13 4 H -0.27 -5.13 7.11 56.52 0.40 -4.73 13 5 H -0.27 -5.21 7.11 56.52 0.40 -4.81 13 6 H -0.26 -4.96 7.11 56.52 0.40 -4.56 13 7 C -0.43 -11.92 9.45 -38.21 -0.36 -12.28 13 8 H 0.11 2.92 7.85 -52.49 -0.41 2.51 13 9 C 0.35 10.23 7.66 -16.54 -0.13 10.10 13 10 N -0.61 -17.26 11.35 -9.64 -0.11 -17.37 13 11 C -0.04 -1.02 6.82 -82.88 -0.57 -1.58 13 12 C 0.16 2.99 8.09 36.01 0.29 3.28 13 13 F -0.22 -4.51 17.34 2.25 0.04 -4.48 13 14 C -0.19 -4.63 12.13 29.90 0.36 -4.27 13 15 O -0.18 -5.30 9.06 3.11 0.03 -5.27 13 16 H 0.29 6.75 8.29 -40.82 -0.34 6.41 13 17 H 0.08 1.39 8.14 -51.93 -0.42 0.97 13 18 H 0.08 1.16 8.14 -51.93 -0.42 0.74 13 19 H 0.18 3.57 8.06 -52.49 -0.42 3.15 13 LS Contribution 190.75 15.07 2.87 2.87 Total: -1.00 -31.31 190.75 -2.84 -34.14 By element: Atomic # 1 Polarization: 0.49 SS G_CDS: -0.81 Total: -0.32 kcal Atomic # 6 Polarization: -2.59 SS G_CDS: -0.49 Total: -3.08 kcal Atomic # 7 Polarization: -37.81 SS G_CDS: 0.56 Total: -37.26 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: 0.03 Total: -5.27 kcal Atomic # 9 Polarization: -4.51 SS G_CDS: 0.04 Total: -4.48 kcal Atomic # 14 Polarization: 18.42 SS G_CDS: -5.03 Total: 13.39 kcal Total LS contribution 2.87 Total: 2.87 kcal Total: -31.31 -2.84 -34.14 kcal The number of atoms in the molecule is 19 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261168581.mol2 19 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.716 kcal (2) G-P(sol) polarization free energy of solvation -31.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.142 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.858 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.10 seconds