Wall clock time and date at job start Mon Mar 30 2020 02:19:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.50699 * 109.47266 * 43.37441 * 3 2 1 5 5 N 1.31402 * 125.15965 * 269.97913 * 4 3 2 6 6 N 1.40457 * 107.17897 * 179.76496 * 5 4 3 7 7 H 0.97000 * 127.01170 * 180.25964 * 6 5 4 8 8 C 1.37021 * 105.96709 * 0.40360 * 6 5 4 9 9 C 1.40373 * 126.31190 * 179.85901 * 8 6 5 10 10 H 1.07996 * 120.00180 * 5.40175 * 9 8 6 11 11 C 1.40268 * 119.99722 * 185.12358 * 9 8 6 12 12 N 1.30644 * 119.99965 * 354.27997 * 11 9 8 13 13 Si 1.86801 * 119.99995 * 174.28037 * 11 9 8 14 14 H 1.48504 * 109.47109 * 94.98449 * 13 11 9 15 15 H 1.48500 * 109.47205 * 214.98303 * 13 11 9 16 16 H 1.48499 * 109.47227 * 334.98241 * 13 11 9 17 17 N 1.32229 * 125.15721 * 89.99862 * 4 3 2 18 18 H 1.09004 * 109.46711 * 283.37600 * 3 2 1 19 19 H 1.08995 * 109.47133 * 163.37249 * 3 2 1 20 20 H 0.97006 * 119.99831 * 179.97438 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1108 -1.0319 -0.9757 5 7 3.3640 -2.2880 -0.6847 6 7 3.8042 -2.9069 -1.8662 7 1 4.0651 -3.8346 -1.9772 8 6 3.7932 -1.9322 -2.8291 9 6 4.1605 -2.0889 -4.1748 10 1 4.4071 -3.0685 -4.5567 11 6 4.2015 -0.9739 -5.0249 12 7 3.7915 0.1900 -4.5960 13 14 4.8425 -1.1533 -6.7703 14 1 3.7024 -1.3733 -7.6962 15 1 5.5662 0.0830 -7.1614 16 1 5.7684 -2.3121 -6.8410 17 7 3.3645 -0.8111 -2.2546 18 1 2.9713 -0.2369 0.9998 19 1 2.9708 0.9855 -0.2941 20 1 3.8202 0.9612 -5.1838 RHF calculation, no. of doubly occupied orbitals= 31 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044369283.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:19:40 Heat of formation + Delta-G solvation = 94.413848 kcal Electronic energy + Delta-G solvation = -9663.429106 eV Core-core repulsion = 7668.679603 eV Total energy + Delta-G solvation = -1994.749504 eV No. of doubly occupied orbitals = 31 Molecular weight (most abundant/longest-lived isotopes) = 178.055 amu Computer time = 0.13 seconds Orbital eigenvalues (eV) -39.86928 -36.09599 -33.73858 -31.96478 -29.74462 -28.39918 -25.76894 -20.80981 -19.70014 -17.21843 -16.87485 -16.01655 -14.86325 -13.99554 -13.75853 -13.32440 -12.98263 -12.19398 -11.81553 -11.57042 -11.31561 -11.12737 -10.87737 -10.41082 -10.05368 -9.51011 -8.45571 -7.95472 -7.94543 -6.68816 -4.79262 2.86974 3.05135 3.08063 3.11449 3.32002 3.44153 3.85355 4.25719 4.42396 4.82749 5.38111 5.48258 5.73838 6.03274 6.72867 7.06745 7.49005 7.87560 8.05046 8.18577 8.25001 8.66106 9.08798 10.05492 10.24526 Molecular weight = 178.05amu Principal moments of inertia in cm(-1) A = 0.062489 B = 0.012431 C = 0.011017 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 447.973211 B = 2251.908499 C = 2540.903400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.455 5.455 2 C 0.233 3.767 3 C 0.079 3.921 4 C 0.205 3.795 5 N -0.401 5.401 6 N -0.560 5.560 7 H 0.416 0.584 8 C 0.409 3.591 9 C -0.452 4.452 10 H 0.088 0.912 11 C 0.083 3.917 12 N -0.725 5.725 13 Si 0.918 3.082 14 H -0.270 1.270 15 H -0.274 1.274 16 H -0.261 1.261 17 N -0.552 5.552 18 H 0.116 0.884 19 H 0.126 0.874 20 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.215 0.083 0.822 3.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.133 5.133 2 C -0.085 4.085 3 C 0.037 3.963 4 C -0.080 4.080 5 N -0.238 5.238 6 N -0.279 5.279 7 H 0.257 0.743 8 C 0.160 3.840 9 C -0.493 4.493 10 H 0.106 0.894 11 C -0.145 4.145 12 N -0.348 5.348 13 Si 0.742 3.258 14 H -0.195 1.195 15 H -0.199 1.199 16 H -0.185 1.185 17 N -0.289 5.289 18 H 0.134 0.866 19 H 0.143 0.857 20 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.316 0.389 1.386 1.950 hybrid contribution 0.982 -0.778 -1.164 1.710 sum 2.298 -0.389 0.222 2.341 Atomic orbital electron populations 1.81085 1.13078 1.09479 1.09621 1.28940 0.95002 0.92369 0.92221 1.17137 0.81207 0.99203 0.98797 1.23029 1.00062 0.91386 0.93554 1.77605 1.31009 1.08556 1.06617 1.48000 1.61362 1.11670 1.06865 0.74252 1.20943 0.90037 0.81981 0.91016 1.18415 1.44616 0.95992 0.90300 0.89434 1.25831 0.93637 0.94509 1.00487 1.69970 1.28825 0.99970 1.36021 0.86151 0.79546 0.79048 0.81092 1.19470 1.19923 1.18519 1.71297 1.28524 1.25415 1.03643 0.86574 0.85651 0.91058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -9.59 18.54 42.15 0.78 -8.81 14 2 C 0.23 4.47 15.41 -20.76 -0.32 4.15 14 3 C 0.08 1.36 6.33 -30.67 -0.19 1.17 14 4 C 0.20 4.80 7.29 -157.16 -1.15 3.65 14 5 N -0.40 -9.63 12.80 32.36 0.41 -9.21 14 6 N -0.56 -13.33 7.58 31.10 0.24 -13.09 14 7 H 0.42 8.39 8.96 -182.33 -1.63 6.76 14 8 C 0.41 10.83 7.70 -155.88 -1.20 9.63 14 9 C -0.45 -11.44 9.47 -38.02 -0.36 -11.80 14 10 H 0.09 2.01 7.86 -52.49 -0.41 1.60 14 11 C 0.08 2.01 5.49 -17.29 -0.10 1.92 14 12 N -0.72 -18.69 11.95 55.56 0.66 -18.02 14 13 Si 0.92 17.71 29.57 -169.99 -5.03 12.68 14 14 H -0.27 -5.17 7.11 56.52 0.40 -4.77 14 15 H -0.27 -5.20 7.11 56.52 0.40 -4.79 14 16 H -0.26 -4.91 7.11 56.52 0.40 -4.51 14 17 N -0.55 -14.84 9.42 -10.11 -0.10 -14.94 14 18 H 0.12 1.56 8.14 -51.93 -0.42 1.14 14 19 H 0.13 1.88 8.14 -51.93 -0.42 1.46 14 20 H 0.28 6.47 8.29 -40.82 -0.34 6.13 14 LS Contribution 204.27 15.07 3.08 3.08 Total: -1.00 -31.30 204.27 -5.29 -36.59 By element: Atomic # 1 Polarization: 5.04 SS G_CDS: -2.03 Total: 3.01 kcal Atomic # 6 Polarization: 12.03 SS G_CDS: -3.31 Total: 8.72 kcal Atomic # 7 Polarization: -66.08 SS G_CDS: 2.00 Total: -64.08 kcal Atomic # 14 Polarization: 17.71 SS G_CDS: -5.03 Total: 12.68 kcal Total LS contribution 3.08 Total: 3.08 kcal Total: -31.30 -5.29 -36.59 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044369283.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.003 kcal (2) G-P(sol) polarization free energy of solvation -31.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.590 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.13 seconds