Wall clock time and date at job start Mon Mar 30 2020 01:56:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.40279 * 119.90985 * 103.50502 * 3 2 1 5 5 N 1.31433 * 120.11067 * 180.02562 * 4 3 2 6 6 C 1.34107 * 119.91427 * 359.97438 * 5 4 3 7 7 C 1.40915 * 120.08941 * 180.02562 * 6 5 4 8 8 H 1.08002 * 120.00197 * 180.02562 * 7 6 5 9 9 C 1.40328 * 120.00073 * 359.71840 * 7 6 5 10 10 N 1.30574 * 119.99988 * 0.28182 * 9 7 6 11 11 Si 1.86803 * 120.00016 * 180.28003 * 9 7 6 12 12 H 1.48490 * 109.47019 * 60.00141 * 11 9 7 13 13 H 1.48504 * 109.47032 * 180.02562 * 11 9 7 14 14 H 1.48501 * 109.46993 * 300.00108 * 11 9 7 15 15 C 1.41108 * 119.81827 * 0.27675 * 6 5 4 16 16 N 1.31432 * 119.89414 * 359.47394 * 15 6 5 17 17 H 1.08005 * 119.94582 * 359.97438 * 4 3 2 18 18 H 0.97005 * 119.99970 * 179.97438 * 10 9 7 19 19 H 1.08002 * 120.05400 * 179.72785 * 15 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2673 0.2849 -1.1823 5 7 4.5817 0.2861 -1.1869 6 6 5.2547 0.0155 -0.0590 7 6 6.6638 0.0163 -0.0596 8 1 7.2044 -0.2023 0.8495 9 6 7.3648 0.2946 -1.2429 10 7 6.7113 0.5584 -2.3422 11 14 9.2328 0.2880 -1.2455 12 1 9.7235 -1.0552 -0.8454 13 1 9.7270 0.6104 -2.6083 14 1 9.7328 1.3041 -0.2849 15 6 4.5478 -0.2752 1.1272 16 7 3.2335 -0.2696 1.1247 17 1 2.7249 0.5024 -2.0906 18 1 7.1959 0.7512 -3.1601 19 1 5.0860 -0.4980 2.0367 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000716252394.mol2 19 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:56:25 Heat of formation + Delta-G solvation = 44.781866 kcal Electronic energy + Delta-G solvation = -9106.894106 eV Core-core repulsion = 7202.729787 eV Total energy + Delta-G solvation = -1904.164319 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 175.044 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -40.89830 -37.37550 -36.02687 -34.07133 -32.36711 -28.64790 -24.85473 -24.45387 -20.19315 -19.43634 -18.02185 -17.01046 -15.88386 -15.42792 -15.25301 -14.38711 -13.90218 -13.76108 -13.50871 -13.29964 -12.91895 -12.66348 -12.03877 -11.71541 -11.58955 -11.11472 -9.87376 -9.50624 -8.54291 -6.83433 0.18628 0.99369 1.47015 1.53479 1.61410 1.79853 2.16573 2.17651 2.81703 3.17029 3.74348 3.99151 4.34230 4.39395 4.91494 4.96679 5.18066 5.49482 5.96677 6.29871 6.51312 6.66136 7.17426 7.76002 8.12183 Molecular weight = 175.04amu Principal moments of inertia in cm(-1) A = 0.115419 B = 0.011483 C = 0.010482 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 242.535391 B = 2437.832904 C = 2670.522000 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.497 5.497 2 C 0.319 3.681 3 C -0.101 4.101 4 C 0.153 3.847 5 N -0.492 5.492 6 C 0.164 3.836 7 C -0.372 4.372 8 H 0.125 0.875 9 C 0.014 3.986 10 N -0.716 5.716 11 Si 1.000 3.000 12 H -0.252 1.252 13 H -0.270 1.270 14 H -0.252 1.252 15 C -0.036 4.036 16 N -0.414 5.414 17 H 0.159 0.841 18 H 0.295 0.705 19 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.752 0.000 -0.106 7.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.178 5.178 2 C 0.007 3.993 3 C -0.235 4.235 4 C -0.023 4.023 5 N -0.208 5.208 6 C 0.041 3.959 7 C -0.402 4.402 8 H 0.143 0.857 9 C -0.214 4.214 10 N -0.334 5.334 11 Si 0.819 3.181 12 H -0.175 1.175 13 H -0.194 1.194 14 H -0.175 1.175 15 C -0.216 4.216 16 N -0.126 5.126 17 H 0.177 0.823 18 H 0.107 0.893 19 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 5.970 0.069 -0.382 5.982 hybrid contribution 0.738 0.030 -0.130 0.750 sum 6.708 0.098 -0.511 6.728 Atomic orbital electron populations 1.81060 1.12257 1.14875 1.09602 1.25188 0.91668 0.90846 0.91600 1.16668 0.85616 1.26954 0.94304 1.23700 0.92075 0.90449 0.96094 1.69625 1.05137 1.18793 1.27237 1.20012 0.95957 0.91071 0.88827 1.20596 0.89870 1.31504 0.98186 0.85729 1.27385 1.07185 0.92730 0.94078 1.70059 1.41029 1.21252 1.01089 0.84948 0.73373 0.80708 0.79117 1.17548 1.19443 1.17548 1.23586 0.88905 1.09297 0.99763 1.67580 1.10407 1.07481 1.27166 0.82348 0.89329 0.81147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -22.22 18.54 19.00 0.35 -21.86 13 2 C 0.32 14.18 15.55 88.33 1.37 15.56 13 3 C -0.10 -4.63 6.61 40.64 0.27 -4.36 13 4 C 0.15 6.91 10.93 85.25 0.93 7.85 13 5 N -0.49 -24.40 8.02 -187.56 -1.50 -25.90 13 6 C 0.16 7.80 6.55 40.16 0.26 8.06 13 7 C -0.37 -16.09 9.15 23.43 0.21 -15.88 13 8 H 0.12 4.60 7.85 -2.91 -0.02 4.58 13 9 C 0.01 0.57 5.50 85.39 0.47 1.04 13 10 N -0.72 -32.20 11.47 21.89 0.25 -31.95 13 11 Si 1.00 29.79 29.56 68.60 2.03 31.82 13 12 H -0.25 -7.20 7.11 99.48 0.71 -6.49 13 13 H -0.27 -7.87 7.11 99.48 0.71 -7.16 13 14 H -0.25 -7.20 7.11 99.48 0.71 -6.49 13 15 C -0.04 -1.59 10.98 85.46 0.94 -0.65 13 16 N -0.41 -19.39 10.41 -186.11 -1.94 -21.33 13 17 H 0.16 6.22 8.06 -2.91 -0.02 6.20 13 18 H 0.30 11.79 8.29 -92.70 -0.77 11.02 13 19 H 0.17 6.36 8.06 -2.91 -0.02 6.34 13 Total: -1.00 -54.56 196.83 4.93 -49.63 By element: Atomic # 1 Polarization: 6.71 SS G_CDS: 1.28 Total: 7.99 kcal Atomic # 6 Polarization: 7.16 SS G_CDS: 4.46 Total: 11.62 kcal Atomic # 7 Polarization: -98.21 SS G_CDS: -2.84 Total: -101.05 kcal Atomic # 14 Polarization: 29.79 SS G_CDS: 2.03 Total: 31.82 kcal Total: -54.56 4.93 -49.63 kcal The number of atoms in the molecule is 19 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000716252394.mol2 19 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.408 kcal (2) G-P(sol) polarization free energy of solvation -54.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.626 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds