Wall clock time and date at job start Mon Mar 30 2020 01:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35316 * 116.99947 * 2 1 4 4 N 1.32577 * 118.89274 * 180.02562 * 3 2 1 5 5 C 1.31840 * 121.03374 * 179.97438 * 4 3 2 6 6 C 1.41144 * 118.84596 * 0.27292 * 5 4 3 7 7 C 1.41319 * 120.98826 * 179.69895 * 6 5 4 8 8 H 1.07996 * 119.99608 * 23.23109 * 7 6 5 9 9 C 1.39896 * 120.00060 * 203.22876 * 7 6 5 10 10 N 1.30876 * 120.00038 * 17.16278 * 9 7 6 11 11 Si 1.86798 * 119.99948 * 197.16993 * 9 7 6 12 12 H 1.48492 * 109.47418 * 89.99878 * 11 9 7 13 13 H 1.48507 * 109.47151 * 210.00028 * 11 9 7 14 14 H 1.48500 * 109.47029 * 329.99483 * 11 9 7 15 15 C 1.41149 * 118.02267 * 359.46510 * 6 5 4 16 16 N 1.31836 * 118.84929 * 0.53601 * 15 6 5 17 17 H 1.08998 * 109.46920 * 300.00151 * 1 2 3 18 18 H 1.09002 * 109.46957 * 60.00130 * 1 2 3 19 19 H 1.09001 * 109.46815 * 179.97438 * 1 2 3 20 20 H 1.08000 * 120.57812 * 179.97438 * 5 4 3 21 21 H 0.97002 * 119.99907 * 179.97438 * 10 9 7 22 22 H 1.07997 * 120.57356 * 180.23610 * 15 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0433 1.2057 0.0000 4 7 3.3684 1.2495 -0.0005 5 6 4.0104 2.4010 -0.0010 6 6 3.2621 3.5978 0.0048 7 6 3.9037 4.8569 0.0109 8 1 4.9146 4.9496 -0.3577 9 6 3.2293 5.9833 0.4943 10 7 2.1623 5.8380 1.2381 11 14 3.8516 7.6946 0.0779 12 1 3.2147 8.1605 -1.1800 13 1 3.5093 8.6279 1.1812 14 1 5.3256 7.6560 -0.0983 15 6 1.8541 3.4996 -0.0006 16 7 1.2998 2.3034 -0.0001 17 1 -0.3633 0.5139 0.8900 18 1 -0.3633 0.5138 -0.8900 19 1 -0.3633 -1.0277 -0.0005 20 1 5.0900 2.4281 -0.0011 21 1 1.6949 6.6190 1.5736 22 1 1.2414 4.3890 -0.0003 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044368737.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:49:33 Heat of formation + Delta-G solvation = -0.314025 kcal Electronic energy + Delta-G solvation = -10267.823059 eV Core-core repulsion = 8209.361616 eV Total energy + Delta-G solvation = -2058.461442 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 180.064 amu Computer time = 0.10 seconds Orbital eigenvalues (eV) -39.39713 -36.99267 -34.09628 -32.13041 -30.18849 -26.95485 -25.15898 -22.84809 -21.64641 -17.63739 -17.46492 -16.37872 -15.18034 -15.07305 -13.78918 -13.47587 -13.27650 -12.71130 -12.04616 -11.84802 -11.44836 -11.15779 -11.08206 -10.72005 -10.25078 -9.62853 -9.41161 -9.33307 -7.86634 -7.58301 -7.00341 -4.55238 2.50328 2.69060 2.97167 3.00807 3.06705 3.76502 3.93142 4.48613 5.51730 5.69249 5.80782 5.93705 6.15201 6.23271 6.36676 6.81111 6.92763 7.28304 7.53833 8.05692 8.14462 8.28172 8.52649 8.87381 9.67858 9.93945 Molecular weight = 180.06amu Principal moments of inertia in cm(-1) A = 0.090262 B = 0.011624 C = 0.010563 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 310.134497 B = 2408.224564 C = 2650.080106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 O -0.314 6.314 3 C 0.344 3.656 4 N -0.502 5.502 5 C 0.042 3.958 6 C -0.010 4.010 7 C -0.439 4.439 8 H 0.087 0.913 9 C 0.072 3.928 10 N -0.793 5.793 11 Si 0.919 3.081 12 H -0.266 1.266 13 H -0.276 1.276 14 H -0.260 1.260 15 C 0.106 3.894 16 N -0.547 5.547 17 H 0.048 0.952 18 H 0.048 0.952 19 H 0.082 0.918 20 H 0.147 0.853 21 H 0.287 0.713 22 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.268 0.693 -1.426 2.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.039 4.039 2 O -0.219 6.219 3 C 0.044 3.956 4 N -0.225 5.225 5 C -0.125 4.125 6 C -0.017 4.017 7 C -0.469 4.469 8 H 0.105 0.895 9 C -0.147 4.147 10 N -0.418 5.418 11 Si 0.743 3.257 12 H -0.191 1.191 13 H -0.201 1.201 14 H -0.184 1.184 15 C -0.065 4.065 16 N -0.273 5.273 17 H 0.067 0.933 18 H 0.066 0.934 19 H 0.101 0.899 20 H 0.164 0.836 21 H 0.098 0.902 22 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -1.847 -0.414 -1.279 2.284 hybrid contribution 0.379 1.821 -0.014 1.860 sum -1.468 1.408 -1.293 2.410 Atomic orbital electron populations 1.22540 0.78620 1.01052 1.01652 1.85796 1.20921 1.24703 1.90475 1.19922 0.86108 0.83883 1.05668 1.66811 1.07605 1.31701 1.16344 1.22748 0.98590 0.86104 1.05063 1.19160 0.94099 0.94751 0.93641 1.19411 1.01133 0.90950 1.35389 0.89480 1.26019 0.94252 1.02220 0.92216 1.69738 1.16033 1.33468 1.22583 0.86119 0.80435 0.80022 0.79128 1.19050 1.20114 1.18360 1.23210 0.93165 0.92296 0.97791 1.67510 1.42065 0.99767 1.17911 0.93298 0.93365 0.89911 0.83617 0.90162 0.81852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.05 10.35 101.05 1.05 2.09 14 2 O -0.31 -7.35 10.55 -17.64 -0.19 -7.54 14 3 C 0.34 9.01 8.48 -90.80 -0.77 8.24 14 4 N -0.50 -13.25 10.44 -14.09 -0.15 -13.39 14 5 C 0.04 1.06 11.11 -16.45 -0.18 0.88 14 6 C -0.01 -0.26 5.61 -106.52 -0.60 -0.86 14 7 C -0.44 -10.82 9.10 -37.79 -0.34 -11.16 14 8 H 0.09 2.01 7.90 -52.49 -0.41 1.60 14 9 C 0.07 1.67 5.19 -17.34 -0.09 1.58 14 10 N -0.79 -19.24 10.91 55.55 0.61 -18.63 14 11 Si 0.92 17.31 29.59 -169.99 -5.03 12.28 14 12 H -0.27 -4.96 7.11 56.52 0.40 -4.56 14 13 H -0.28 -5.12 7.11 56.52 0.40 -4.72 14 14 H -0.26 -4.82 7.11 56.52 0.40 -4.42 14 15 C 0.11 2.79 10.00 -16.45 -0.16 2.62 14 16 N -0.55 -14.24 9.16 -14.09 -0.13 -14.37 14 17 H 0.05 0.88 8.08 -51.93 -0.42 0.46 14 18 H 0.05 0.85 8.08 -51.93 -0.42 0.43 14 19 H 0.08 1.15 8.14 -51.93 -0.42 0.73 14 20 H 0.15 3.21 8.06 -52.49 -0.42 2.79 14 21 H 0.29 6.29 8.30 -40.82 -0.34 5.95 14 22 H 0.16 4.26 6.18 -52.49 -0.32 3.93 14 LS Contribution 206.55 15.07 3.11 3.11 Total: -1.00 -28.52 206.55 -4.43 -32.95 By element: Atomic # 1 Polarization: 3.75 SS G_CDS: -1.56 Total: 2.19 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: -1.10 Total: 3.39 kcal Atomic # 7 Polarization: -46.72 SS G_CDS: 0.33 Total: -46.39 kcal Atomic # 8 Polarization: -7.35 SS G_CDS: -0.19 Total: -7.54 kcal Atomic # 14 Polarization: 17.31 SS G_CDS: -5.03 Total: 12.28 kcal Total LS contribution 3.11 Total: 3.11 kcal Total: -28.52 -4.43 -32.95 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044368737.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.640 kcal (2) G-P(sol) polarization free energy of solvation -28.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.10 seconds