Wall clock time and date at job start Mon Mar 30 2020 01:47:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.34323 * 126.32413 * 2 1 4 4 H 0.97000 * 125.74606 * 359.96247 * 3 2 1 5 5 N 1.39921 * 108.50183 * 179.97438 * 3 2 1 6 6 C 1.30427 * 108.98162 * 359.97438 * 5 3 2 7 7 C 1.38397 * 126.32583 * 179.68882 * 2 1 3 8 8 C 1.47500 * 126.44223 * 0.02562 * 7 2 1 9 9 O 1.21813 * 119.99927 * 359.97438 * 8 7 2 10 10 C 1.46144 * 120.00189 * 179.97438 * 8 7 2 11 11 H 1.08002 * 119.99935 * 0.02562 * 10 8 7 12 12 C 1.40272 * 120.00366 * 180.02562 * 10 8 7 13 13 N 1.30570 * 119.99498 * 359.97438 * 12 10 8 14 14 Si 1.86798 * 120.00042 * 180.02562 * 12 10 8 15 15 H 1.48497 * 109.47314 * 59.99861 * 14 12 10 16 16 H 1.48504 * 109.47035 * 179.97438 * 14 12 10 17 17 H 1.48498 * 109.46871 * 299.99682 * 14 12 10 18 18 H 1.09002 * 109.47152 * 90.02464 * 1 2 3 19 19 H 1.09001 * 109.46980 * 330.02565 * 1 2 3 20 20 H 1.09004 * 109.47113 * 210.02546 * 1 2 3 21 21 H 1.07993 * 125.97987 * 179.97438 * 6 5 3 22 22 H 0.97001 * 119.99209 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.3027 1.0822 0.0000 4 1 2.0041 2.0051 -0.0005 5 7 3.6348 0.6540 0.0006 6 6 3.6612 -0.6500 0.0015 7 6 2.3269 -1.1150 0.0061 8 6 1.8899 -2.5238 0.0132 9 8 0.7019 -2.7930 0.0146 10 6 2.8822 -3.5966 0.0185 11 1 3.9356 -3.3580 0.0177 12 6 2.4667 -4.9364 0.0247 13 7 1.1933 -5.2249 0.0263 14 14 3.7352 -6.3076 0.0323 15 1 4.5844 -6.1898 1.2448 16 1 3.0435 -7.6217 0.0388 17 1 4.5859 -6.2016 -1.1802 18 1 -0.3633 -0.0004 -1.0277 19 1 -0.3633 0.8902 0.5134 20 1 -0.3633 -0.8898 0.5142 21 1 4.5477 -1.2667 0.0017 22 1 0.9060 -6.1514 0.0310 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000082408671.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:47:04 Heat of formation + Delta-G solvation = 19.227782 kcal Electronic energy + Delta-G solvation = -10272.435733 eV Core-core repulsion = 8214.821687 eV Total energy + Delta-G solvation = -2057.614046 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 180.064 amu Computer time = 0.11 seconds Orbital eigenvalues (eV) -40.35304 -36.09942 -32.61036 -31.84462 -30.19282 -27.18304 -25.75993 -21.60049 -20.96062 -18.40810 -16.96947 -15.68376 -14.86874 -14.32292 -13.60897 -13.28166 -12.89425 -12.32068 -12.17567 -11.64966 -11.52952 -11.14822 -10.91183 -10.48282 -10.31202 -9.85740 -8.91928 -8.84317 -7.58012 -7.39143 -6.18860 -4.69411 2.43820 3.09980 3.19998 3.22056 3.30261 3.45788 4.11288 4.63310 5.41950 5.55873 5.66081 5.82809 6.12557 6.40329 6.53554 6.66780 6.84456 7.36898 7.42070 7.88314 8.16676 8.32883 8.86004 8.96360 10.42281 10.63295 Molecular weight = 180.06amu Principal moments of inertia in cm(-1) A = 0.064123 B = 0.013283 C = 0.011069 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 436.557869 B = 2107.492211 C = 2528.904685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.099 3.901 3 N -0.483 5.483 4 H 0.428 0.572 5 N -0.327 5.327 6 C 0.081 3.919 7 C -0.254 4.254 8 C 0.427 3.573 9 O -0.539 6.539 10 C -0.523 4.523 11 H 0.071 0.929 12 C 0.081 3.919 13 N -0.755 5.755 14 Si 0.904 3.096 15 H -0.266 1.266 16 H -0.280 1.280 17 H -0.266 1.266 18 H 0.073 0.927 19 H 0.054 0.946 20 H 0.107 0.893 21 H 0.185 0.815 22 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.428 5.912 0.002 6.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.031 4.031 3 N -0.191 5.191 4 H 0.270 0.730 5 N -0.149 5.149 6 C -0.105 4.105 7 C -0.266 4.266 8 C 0.320 3.680 9 O -0.427 6.427 10 C -0.556 4.556 11 H 0.089 0.911 12 C -0.139 4.139 13 N -0.384 5.384 14 Si 0.728 3.272 15 H -0.191 1.191 16 H -0.205 1.205 17 H -0.191 1.191 18 H 0.092 0.908 19 H 0.073 0.927 20 H 0.125 0.875 21 H 0.201 0.799 22 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 1.412 6.697 0.004 6.844 hybrid contribution 0.247 -0.829 -0.020 0.865 sum 1.659 5.869 -0.016 6.099 Atomic orbital electron populations 1.20499 0.87096 1.03787 1.03089 1.21769 0.94528 0.87235 0.99530 1.46037 1.04544 1.07713 1.60840 0.73010 1.76892 0.96195 1.14321 1.27506 1.24063 0.98593 0.90950 0.96910 1.22071 0.91582 0.98077 1.14917 1.18606 0.89064 0.83457 0.76878 1.90430 1.19084 1.84553 1.48613 1.21554 0.94287 0.90683 1.49069 0.91094 1.25916 0.95387 0.99846 0.92780 1.69940 1.15430 1.19644 1.33391 0.86482 0.81267 0.79730 0.79683 1.19093 1.20518 1.19090 0.90822 0.92735 0.87468 0.79862 0.91791 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.51 9.91 36.01 0.36 -1.15 14 2 C 0.10 2.01 7.31 -81.44 -0.60 1.41 14 3 N -0.48 -8.56 7.29 33.93 0.25 -8.32 14 4 H 0.43 5.69 8.96 -182.73 -1.64 4.05 14 5 N -0.33 -6.50 12.63 30.86 0.39 -6.11 14 6 C 0.08 1.72 11.47 -16.99 -0.19 1.53 14 7 C -0.25 -6.08 6.12 -104.90 -0.64 -6.72 14 8 C 0.43 12.06 7.09 -32.64 -0.23 11.83 14 9 O -0.54 -16.57 13.54 5.09 0.07 -16.50 14 10 C -0.52 -14.52 9.20 -35.65 -0.33 -14.85 14 11 H 0.07 1.79 6.98 -52.49 -0.37 1.42 14 12 C 0.08 2.21 5.51 -17.32 -0.10 2.11 14 13 N -0.75 -21.83 11.82 55.56 0.66 -21.18 14 14 Si 0.90 19.59 29.56 -169.99 -5.03 14.56 14 15 H -0.27 -5.63 7.11 56.52 0.40 -5.23 14 16 H -0.28 -5.93 7.11 56.52 0.40 -5.52 14 17 H -0.27 -5.63 7.11 56.52 0.40 -5.23 14 18 H 0.07 1.21 8.14 -51.93 -0.42 0.79 14 19 H 0.05 0.73 8.14 -51.93 -0.42 0.31 14 20 H 0.11 2.20 6.50 -51.93 -0.34 1.87 14 21 H 0.18 3.47 7.40 -52.49 -0.39 3.08 14 22 H 0.27 7.11 8.29 -40.82 -0.34 6.77 14 LS Contribution 207.17 15.07 3.12 3.12 Total: -1.00 -32.97 207.17 -4.98 -37.95 By element: Atomic # 1 Polarization: 5.02 SS G_CDS: -2.71 Total: 2.31 kcal Atomic # 6 Polarization: -4.10 SS G_CDS: -1.73 Total: -5.83 kcal Atomic # 7 Polarization: -36.90 SS G_CDS: 1.29 Total: -35.60 kcal Atomic # 8 Polarization: -16.57 SS G_CDS: 0.07 Total: -16.50 kcal Atomic # 14 Polarization: 19.59 SS G_CDS: -5.03 Total: 14.56 kcal Total LS contribution 3.12 Total: 3.12 kcal Total: -32.97 -4.98 -37.95 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000082408671.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.173 kcal (2) G-P(sol) polarization free energy of solvation -32.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.946 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.11 seconds