Wall clock time and date at job start Mon Mar 30 2020 02:21:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53001 * 110.05647 * 2 1 4 4 C 1.54269 * 110.03414 * 238.58245 * 2 1 3 5 5 H 1.08998 * 110.48673 * 145.51198 * 4 2 1 6 6 O 1.42902 * 110.48454 * 23.00995 * 4 2 1 7 7 C 1.54882 * 104.19831 * 264.32705 * 4 2 1 8 8 C 1.54888 * 102.74855 * 322.05471 * 7 4 2 9 9 C 1.53873 * 110.03228 * 121.41729 * 2 1 3 10 10 H 1.09002 * 110.03070 * 0.02562 * 9 2 1 11 11 C 1.50702 * 110.03212 * 238.61686 * 9 2 1 12 12 H 1.07997 * 120.00119 * 0.69732 * 11 9 2 13 13 C 1.37875 * 119.99864 * 180.68618 * 11 9 2 14 14 N 1.31517 * 120.00173 * 180.02562 * 13 11 9 15 15 Si 1.86803 * 119.99998 * 0.02562 * 13 11 9 16 16 H 1.48498 * 109.47068 * 89.99901 * 15 13 11 17 17 H 1.48505 * 109.46961 * 209.99692 * 15 13 11 18 18 H 1.48496 * 109.46947 * 329.99659 * 15 13 11 19 19 H 1.08994 * 109.47309 * 298.58130 * 1 2 3 20 20 H 1.09001 * 109.46733 * 58.58603 * 1 2 3 21 21 H 1.08996 * 109.46830 * 178.57891 * 1 2 3 22 22 H 1.09001 * 109.47300 * 181.41484 * 3 2 1 23 23 H 1.09003 * 109.47173 * 301.41779 * 3 2 1 24 24 H 1.09000 * 109.46923 * 61.41483 * 3 2 1 25 25 H 0.96701 * 113.99875 * 179.97438 * 6 4 2 26 26 H 1.08998 * 110.75605 * 80.36842 * 7 4 2 27 27 H 1.09002 * 110.75549 * 203.56377 * 7 4 2 28 28 H 1.09001 * 110.49097 * 279.26569 * 8 7 4 29 29 H 1.08999 * 110.48858 * 156.61808 * 8 7 4 30 30 H 0.96998 * 120.00151 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0547 1.4372 0.0000 4 6 2.0585 -0.7555 -1.2369 5 1 2.9798 -0.2986 -1.5980 6 8 1.0722 -0.7739 -2.2708 7 6 2.3281 -2.1901 -0.7192 8 6 2.8875 -1.9407 0.7034 9 6 2.0571 -0.7536 1.2337 10 1 1.2228 -1.1197 1.8322 11 6 2.9266 0.1568 2.0621 12 1 3.0848 1.1798 1.7542 13 6 3.5200 -0.3163 3.2132 14 7 4.2784 0.4782 3.9365 15 14 3.2466 -2.0859 3.7456 16 1 4.2947 -2.9506 3.1463 17 1 3.3190 -2.1742 5.2262 18 1 1.9090 -2.5396 3.2874 19 1 -0.3633 0.4916 0.9024 20 1 -0.3633 0.5357 -0.8771 21 1 -0.3633 -1.0273 -0.0255 22 1 3.1443 1.4262 -0.0254 23 1 1.6761 1.9623 -0.8770 24 1 1.7174 1.9471 0.9024 25 1 1.3517 -1.2362 -3.0728 26 1 1.4031 -2.7651 -0.6752 27 1 3.0652 -2.6942 -1.3442 28 1 3.9440 -1.6767 0.6571 29 1 2.7401 -2.8197 1.3309 30 1 4.6962 0.1453 4.7461 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260372677.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:21:58 Heat of formation + Delta-G solvation = -61.324483 kcal Electronic energy + Delta-G solvation = -12063.126285 eV Core-core repulsion = 10050.936617 eV Total energy + Delta-G solvation = -2012.189668 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 184.120 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -38.88780 -35.11093 -32.21972 -31.46603 -28.14642 -26.62481 -23.89284 -22.76833 -20.28095 -17.71752 -16.86690 -16.37060 -14.79011 -14.07417 -13.63760 -13.59840 -13.25198 -12.27645 -12.17298 -11.98404 -11.56370 -11.24275 -11.09028 -10.63051 -10.35664 -10.25248 -9.94537 -9.70810 -9.47990 -9.25918 -9.16131 -8.66511 -8.49129 -6.01014 -3.99357 3.31125 3.40667 3.42728 4.46945 4.73865 5.24799 5.33330 5.42644 5.64216 6.01729 6.04602 6.17774 6.24153 6.32347 6.44157 6.55069 6.57486 6.70841 6.78295 6.86813 7.05458 7.11515 7.19606 7.30864 7.57421 7.83903 8.09269 8.59805 9.04353 9.62345 11.10779 Molecular weight = 184.12amu Principal moments of inertia in cm(-1) A = 0.050721 B = 0.016231 C = 0.014144 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 551.903583 B = 1724.706516 C = 1979.215302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.045 4.045 3 C -0.119 4.119 4 C 0.105 3.895 5 H 0.057 0.943 6 O -0.565 6.565 7 C -0.154 4.154 8 C -0.130 4.130 9 C 0.018 3.982 10 H 0.032 0.968 11 C -0.517 4.517 12 H 0.094 0.906 13 C 0.071 3.929 14 N -0.904 5.904 15 Si 0.874 3.126 16 H -0.279 1.279 17 H -0.295 1.295 18 H -0.266 1.266 19 H 0.047 0.953 20 H 0.048 0.952 21 H 0.043 0.957 22 H 0.060 0.940 23 H 0.025 0.975 24 H 0.063 0.937 25 H 0.364 0.636 26 H 0.064 0.936 27 H 0.053 0.947 28 H 0.069 0.931 29 H 0.044 0.956 30 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.010 -3.897 -8.879 10.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.045 4.045 3 C -0.176 4.176 4 C 0.047 3.953 5 H 0.075 0.925 6 O -0.369 6.369 7 C -0.192 4.192 8 C -0.168 4.168 9 C -0.001 4.001 10 H 0.050 0.950 11 C -0.554 4.554 12 H 0.112 0.888 13 C -0.130 4.130 14 N -0.543 5.543 15 Si 0.703 3.297 16 H -0.205 1.205 17 H -0.223 1.223 18 H -0.191 1.191 19 H 0.066 0.934 20 H 0.067 0.933 21 H 0.062 0.938 22 H 0.079 0.921 23 H 0.044 0.956 24 H 0.082 0.918 25 H 0.209 0.791 26 H 0.083 0.917 27 H 0.071 0.929 28 H 0.088 0.912 29 H 0.063 0.937 30 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -4.240 -3.535 -8.248 9.925 hybrid contribution 0.410 -1.461 0.062 1.519 sum -3.830 -4.996 -8.185 10.326 Atomic orbital electron populations 1.21585 0.95249 1.00622 1.00240 1.21024 0.94910 0.95603 0.93005 1.21847 1.01106 0.94962 0.99636 1.22888 0.89882 0.94888 0.87656 0.92492 1.86551 1.43743 1.79722 1.26900 1.23145 1.00340 0.97209 0.98518 1.22780 1.01200 0.99113 0.93685 1.19830 0.95234 0.92507 0.92480 0.95016 1.21545 1.27781 0.99627 1.06482 0.88833 1.25011 0.94772 0.96935 0.96300 1.69897 1.32636 1.35738 1.16017 0.87018 0.79270 0.86455 0.76985 1.20518 1.22254 1.19086 0.93382 0.93268 0.93764 0.92111 0.95585 0.91755 0.79111 0.91703 0.92871 0.91182 0.93704 0.92838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.27 7.51 37.16 0.28 -1.99 16 2 C -0.05 -0.92 0.92 -153.39 -0.14 -1.07 16 3 C -0.12 -2.42 6.86 37.16 0.25 -2.16 16 4 C 0.11 1.88 3.62 -25.07 -0.09 1.79 16 5 H 0.06 1.00 7.83 -51.93 -0.41 0.60 16 6 O -0.57 -8.97 11.83 -35.23 -0.42 -9.39 16 7 C -0.15 -2.72 6.62 -24.74 -0.16 -2.88 16 8 C -0.13 -2.79 4.65 -25.07 -0.12 -2.91 16 9 C 0.02 0.43 2.04 -90.65 -0.19 0.25 16 10 H 0.03 0.78 6.70 -51.93 -0.35 0.43 16 11 C -0.52 -14.10 8.08 -34.44 -0.28 -14.38 16 12 H 0.09 2.68 4.91 -52.49 -0.26 2.42 16 13 C 0.07 2.02 5.45 -17.82 -0.10 1.92 16 14 N -0.90 -27.47 13.96 55.43 0.77 -26.70 16 15 Si 0.87 21.85 24.67 -169.99 -4.19 17.65 16 16 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 17 H -0.30 -7.45 7.11 56.52 0.40 -7.05 16 18 H -0.27 -6.44 6.35 56.52 0.36 -6.08 16 19 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 20 H 0.05 0.88 7.60 -51.93 -0.39 0.49 16 21 H 0.04 0.81 8.14 -51.93 -0.42 0.39 16 22 H 0.06 1.30 7.10 -51.93 -0.37 0.93 16 23 H 0.03 0.47 8.14 -51.93 -0.42 0.04 16 24 H 0.06 1.39 7.09 -51.93 -0.37 1.02 16 25 H 0.36 4.04 9.12 45.56 0.42 4.45 16 26 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 27 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 28 H 0.07 1.57 7.85 -51.93 -0.41 1.17 16 29 H 0.04 0.96 5.78 -51.93 -0.30 0.66 16 30 H 0.26 7.53 8.31 -40.82 -0.34 7.19 16 LS Contribution 229.79 15.07 3.46 3.46 Total: -1.00 -29.94 229.79 -4.64 -34.58 By element: Atomic # 1 Polarization: 5.54 SS G_CDS: -3.73 Total: 1.82 kcal Atomic # 6 Polarization: -20.89 SS G_CDS: -0.54 Total: -21.43 kcal Atomic # 7 Polarization: -27.47 SS G_CDS: 0.77 Total: -26.70 kcal Atomic # 8 Polarization: -8.97 SS G_CDS: -0.42 Total: -9.39 kcal Atomic # 14 Polarization: 21.85 SS G_CDS: -4.19 Total: 17.65 kcal Total LS contribution 3.46 Total: 3.46 kcal Total: -29.94 -4.64 -34.58 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260372677.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.740 kcal (2) G-P(sol) polarization free energy of solvation -29.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.324 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds