Wall clock time and date at job start Mon Mar 30 2020 02:30:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.09004 * 108.43266 * 2 1 4 4 C 1.46814 * 108.50193 * 117.65194 * 2 1 3 5 5 N 1.50187 * 106.89494 * 179.28691 * 4 2 1 6 6 C 1.36935 * 120.55970 * 111.73395 * 5 4 2 7 7 H 1.07999 * 119.99969 * 155.46836 * 6 5 4 8 8 C 1.38814 * 120.00300 * 335.46421 * 6 5 4 9 9 N 1.31615 * 120.00027 * 340.57014 * 8 6 5 10 10 Si 1.86801 * 120.00142 * 160.56700 * 8 6 5 11 11 H 1.48496 * 109.47077 * 0.02562 * 10 8 6 12 12 H 1.48509 * 109.47087 * 120.00036 * 10 8 6 13 13 H 1.48493 * 109.47413 * 239.99952 * 10 8 6 14 14 C 1.43612 * 118.87699 * 291.75502 * 5 4 2 15 15 C 1.54931 * 116.19867 * 89.55459 * 14 5 4 16 16 C 1.54882 * 109.69701 * 318.79193 * 15 14 5 17 17 N 1.44247 * 110.15895 * 321.60867 * 16 15 14 18 18 H 1.09002 * 109.47480 * 300.00434 * 1 2 3 19 19 H 1.08999 * 109.47060 * 60.00764 * 1 2 3 20 20 H 1.09003 * 109.46862 * 180.02562 * 1 2 3 21 21 H 1.09002 * 109.96831 * 298.64182 * 4 2 1 22 22 H 1.09006 * 109.96602 * 59.85043 * 4 2 1 23 23 H 0.96996 * 120.00414 * 180.02562 * 9 8 6 24 24 H 1.08998 * 108.13766 * 211.30861 * 14 5 4 25 25 H 1.09009 * 108.13524 * 328.02020 * 14 5 4 26 26 H 1.08998 * 109.43514 * 78.86226 * 15 14 5 27 27 H 1.08998 * 109.43551 * 198.76939 * 15 14 5 28 28 H 1.09010 * 109.33953 * 81.85213 * 16 15 14 29 29 H 1.09000 * 109.34061 * 201.52330 * 16 15 14 30 30 H 1.00898 * 111.13547 * 339.46564 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8746 1.0341 0.0000 4 6 1.9958 -0.6461 1.2332 5 7 3.4970 -0.6425 1.1877 6 6 4.2181 0.1302 2.0583 7 1 5.2340 -0.1399 2.3060 8 6 3.6434 1.2609 2.6226 9 7 2.5867 1.8110 2.0631 10 14 4.3697 2.0016 4.1760 11 1 5.5462 1.2020 4.6024 12 1 4.7931 3.3994 3.9069 13 1 3.3478 1.9927 5.2534 14 6 4.1634 -1.4627 0.2152 15 6 4.4410 -0.8046 -1.1597 16 6 3.2135 0.0337 -1.5946 17 7 1.9938 -0.6435 -1.2278 18 1 -0.3634 0.5139 0.8899 19 1 -0.3633 0.5137 -0.8900 20 1 -0.3633 -1.0277 0.0005 21 1 1.6483 -0.0859 2.1012 22 1 1.6260 -1.6705 1.2794 23 1 2.1854 2.6012 2.4570 24 1 5.1162 -1.7826 0.6369 25 1 3.5545 -2.3509 0.0461 26 1 5.3138 -0.1563 -1.0818 27 1 4.6307 -1.5805 -1.9014 28 1 3.2487 1.0067 -1.1043 29 1 3.2362 0.1733 -2.6754 30 1 2.1547 -1.6288 -1.0812 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260651157.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:48 Heat of formation + Delta-G solvation = 28.362493 kcal Electronic energy + Delta-G solvation = -12221.504267 eV Core-core repulsion = 10245.496469 eV Total energy + Delta-G solvation = -1976.007798 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 184.127 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -38.41976 -33.93328 -32.66827 -30.88796 -27.67383 -25.56615 -24.75339 -22.30821 -19.98350 -19.17721 -16.73059 -15.25304 -14.42921 -14.16203 -13.97591 -13.75954 -12.82571 -12.53611 -12.05773 -11.55075 -11.36328 -11.08658 -10.92983 -10.66722 -10.40294 -10.30023 -10.08920 -9.85327 -9.61745 -9.22189 -8.58039 -7.59930 -6.73630 -5.83903 -3.24573 3.34898 3.43572 3.45614 4.47141 5.31513 5.34394 5.36233 5.83845 5.92066 6.07474 6.17467 6.35407 6.48574 6.50165 6.65214 6.70880 6.79285 6.83363 6.93757 7.01700 7.14806 7.40886 7.46962 7.76464 8.15278 8.34931 8.39583 9.13284 9.80584 10.33742 11.23682 Molecular weight = 184.13amu Principal moments of inertia in cm(-1) A = 0.044815 B = 0.017104 C = 0.014131 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 624.638066 B = 1636.696486 C = 1980.933738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.051 3.949 3 H 0.110 0.890 4 C 0.141 3.859 5 N -0.592 5.592 6 C -0.252 4.252 7 H 0.067 0.933 8 C 0.003 3.997 9 N -0.899 5.899 10 Si 0.902 3.098 11 H -0.279 1.279 12 H -0.291 1.291 13 H -0.289 1.289 14 C 0.152 3.848 15 C -0.177 4.177 16 C 0.060 3.940 17 N -0.664 5.664 18 H 0.049 0.951 19 H 0.043 0.957 20 H 0.035 0.965 21 H 0.097 0.903 22 H 0.008 0.992 23 H 0.253 0.747 24 H 0.036 0.964 25 H 0.025 0.975 26 H 0.054 0.946 27 H 0.046 0.954 28 H 0.072 0.928 29 H 0.045 0.955 30 H 0.325 0.675 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.840 -3.626 -3.352 5.009 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.059 4.059 3 H 0.128 0.872 4 C 0.017 3.983 5 N -0.312 5.312 6 C -0.381 4.381 7 H 0.085 0.915 8 C -0.196 4.196 9 N -0.544 5.544 10 Si 0.732 3.268 11 H -0.204 1.204 12 H -0.218 1.218 13 H -0.216 1.216 14 C 0.023 3.977 15 C -0.219 4.219 16 C -0.071 4.071 17 N -0.292 5.292 18 H 0.068 0.932 19 H 0.062 0.938 20 H 0.054 0.946 21 H 0.115 0.885 22 H 0.026 0.974 23 H 0.064 0.936 24 H 0.054 0.946 25 H 0.043 0.957 26 H 0.073 0.927 27 H 0.065 0.935 28 H 0.091 0.909 29 H 0.063 0.937 30 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -1.365 -3.130 -3.722 5.052 hybrid contribution 1.081 0.206 1.365 1.754 sum -0.285 -2.924 -2.357 3.766 Atomic orbital electron populations 1.21771 0.97260 0.99720 1.00354 1.21258 0.93600 1.02071 0.88986 0.87187 1.20908 0.82648 0.95452 0.99331 1.44312 1.01461 1.50922 1.34554 1.19240 0.97977 1.03110 1.17788 0.91515 1.24943 0.98684 0.95871 1.00069 1.69959 1.24423 1.21392 1.38607 0.86233 0.78434 0.78598 0.83547 1.20412 1.21826 1.21575 1.20466 0.96161 0.92595 0.88520 1.23583 0.99322 0.99661 0.99360 1.21998 0.88218 0.98629 0.98214 1.61656 1.28227 1.06842 1.32494 0.93154 0.93753 0.94597 0.88513 0.97367 0.93646 0.94606 0.95704 0.92727 0.93511 0.90916 0.93714 0.85848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.54 9.36 37.15 0.35 -2.20 16 2 C 0.05 1.13 2.35 -71.07 -0.17 0.96 16 3 H 0.11 2.82 5.21 -51.93 -0.27 2.55 16 4 C 0.14 3.33 4.47 -4.94 -0.02 3.31 16 5 N -0.59 -14.65 2.63 -174.61 -0.46 -15.11 16 6 C -0.25 -6.82 9.61 -15.06 -0.14 -6.97 16 7 H 0.07 1.81 7.88 -52.49 -0.41 1.40 16 8 C 0.00 0.07 4.91 -17.43 -0.09 -0.02 16 9 N -0.90 -24.73 9.61 55.49 0.53 -24.19 16 10 Si 0.90 21.45 29.60 -169.99 -5.03 16.42 16 11 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 12 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 13 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 14 C 0.15 3.24 5.20 -4.55 -0.02 3.22 16 15 C -0.18 -3.42 6.44 -24.72 -0.16 -3.58 16 16 C 0.06 1.22 6.32 -4.25 -0.03 1.19 16 17 N -0.66 -13.30 6.71 -111.23 -0.75 -14.05 16 18 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 19 H 0.04 0.81 8.14 -51.93 -0.42 0.39 16 20 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 21 H 0.10 2.53 6.02 -51.93 -0.31 2.22 16 22 H 0.01 0.18 8.14 -51.93 -0.42 -0.24 16 23 H 0.25 6.81 8.31 -40.82 -0.34 6.47 16 24 H 0.04 0.76 7.97 -51.93 -0.41 0.35 16 25 H 0.02 0.49 6.98 -51.92 -0.36 0.13 16 26 H 0.05 1.09 8.14 -51.93 -0.42 0.67 16 27 H 0.05 0.79 8.14 -51.93 -0.42 0.36 16 28 H 0.07 1.72 6.61 -51.92 -0.34 1.38 16 29 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 30 H 0.32 6.25 6.53 -39.29 -0.26 6.00 16 LS Contribution 231.02 15.07 3.48 3.48 Total: -1.00 -27.03 231.02 -6.97 -34.00 By element: Atomic # 1 Polarization: 8.01 SS G_CDS: -4.47 Total: 3.54 kcal Atomic # 6 Polarization: -3.81 SS G_CDS: -0.28 Total: -4.09 kcal Atomic # 7 Polarization: -52.68 SS G_CDS: -0.67 Total: -53.35 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.03 Total: 16.42 kcal Total LS contribution 3.48 Total: 3.48 kcal Total: -27.03 -6.97 -34.00 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260651157.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.359 kcal (2) G-P(sol) polarization free energy of solvation -27.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.997 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds