Wall clock time and date at job start Mon Mar 30 2020 02:23:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.48067 * 110.99625 * 2 1 4 4 C 1.53372 * 112.15394 * 191.79369 * 3 2 1 5 5 C 1.51032 * 111.73315 * 318.80582 * 4 3 2 6 6 O 1.43660 * 107.92140 * 91.96062 * 5 4 3 7 7 C 1.36474 * 117.39367 * 279.20175 * 6 5 4 8 8 C 1.44846 * 111.03393 * 231.93829 * 2 1 3 9 9 H 1.08997 * 109.59560 * 100.01698 * 8 2 1 10 10 C 1.50689 * 109.49727 * 339.76379 * 8 2 1 11 11 H 1.08004 * 120.00654 * 354.82472 * 10 8 2 12 12 C 1.37876 * 120.00045 * 174.82693 * 10 8 2 13 13 N 1.31521 * 120.00061 * 179.97438 * 12 10 8 14 14 Si 1.86796 * 119.99953 * 0.02562 * 12 10 8 15 15 H 1.48505 * 109.47421 * 89.99730 * 14 12 10 16 16 H 1.48507 * 109.47091 * 209.99795 * 14 12 10 17 17 H 1.48497 * 109.47010 * 329.99747 * 14 12 10 18 18 H 1.09002 * 109.47235 * 74.35235 * 1 2 3 19 19 H 1.09004 * 109.47172 * 194.35013 * 1 2 3 20 20 H 1.08998 * 109.47500 * 314.35340 * 1 2 3 21 21 H 1.08996 * 108.94697 * 71.10797 * 3 2 1 22 22 H 1.08996 * 108.87326 * 312.43114 * 3 2 1 23 23 H 1.08992 * 109.02763 * 198.22654 * 4 3 2 24 24 H 1.09002 * 108.96590 * 79.34470 * 4 3 2 25 25 H 1.08996 * 109.77628 * 332.35454 * 5 4 3 26 26 H 1.08997 * 109.77425 * 211.56593 * 5 4 3 27 27 H 1.09003 * 109.09162 * 181.84534 * 7 6 5 28 28 H 1.08996 * 109.09326 * 300.92415 * 7 6 5 29 29 H 0.97000 * 119.99703 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9995 1.3824 0.0000 4 6 3.5049 1.4241 -0.2903 5 6 4.2437 0.3192 0.4269 6 8 4.3155 -0.8109 -0.4571 7 6 3.2149 -1.6134 -0.5411 8 6 1.9889 -0.8335 -1.0645 9 1 2.2868 -0.2082 -1.9060 10 6 0.9254 -1.8047 -1.5078 11 1 -0.0160 -1.8526 -0.9805 12 6 1.1540 -2.6322 -2.5866 13 7 0.2260 -3.4802 -2.9732 14 14 2.7824 -2.5500 -3.4982 15 1 3.7432 -3.5001 -2.8821 16 1 2.5712 -2.9135 -4.9225 17 1 3.3273 -1.1712 -3.4148 18 1 -0.3634 0.2772 -0.9896 19 1 -0.3634 -0.9956 0.2547 20 1 -0.3634 0.7184 0.7348 21 1 1.8147 1.8324 0.9754 22 1 1.4762 1.9609 -0.7612 23 1 3.9027 2.3858 0.0333 24 1 3.6618 1.3179 -1.3638 25 1 3.7055 0.0440 1.3340 26 1 5.2497 0.6528 0.6813 27 1 3.4273 -2.4402 -1.2190 28 1 2.9882 -2.0124 0.4476 29 1 0.3871 -4.0627 -3.7320 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260616476.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:23:43 Heat of formation + Delta-G solvation = -24.341544 kcal Electronic energy + Delta-G solvation = -12277.253904 eV Core-core repulsion = 10201.242025 eV Total energy + Delta-G solvation = -2076.011878 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 185.116 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -39.07147 -35.77633 -33.24903 -31.64759 -28.66187 -26.64183 -24.17120 -23.54291 -20.96314 -18.97245 -17.10142 -15.96959 -15.57273 -14.90547 -14.44552 -14.03141 -13.58987 -13.19041 -12.33495 -12.24324 -12.05596 -11.43156 -11.07730 -10.84686 -10.67607 -10.49498 -10.20027 -9.69741 -9.65813 -9.06292 -8.75970 -8.46588 -7.24898 -6.12987 -4.14973 3.27581 3.37389 3.45856 4.36966 4.57915 4.79228 5.16431 5.33594 5.44686 5.66085 5.92132 6.09061 6.14417 6.24357 6.28783 6.46663 6.48085 6.56855 6.65001 6.72943 6.95861 7.17399 7.38561 7.97161 8.13236 8.30398 8.66400 8.90079 9.47947 10.97344 Molecular weight = 185.12amu Principal moments of inertia in cm(-1) A = 0.042239 B = 0.019414 C = 0.014894 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 662.734295 B = 1441.922453 C = 1879.467684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.552 5.552 3 C 0.061 3.939 4 C -0.154 4.154 5 C 0.075 3.925 6 O -0.398 6.398 7 C 0.072 3.928 8 C 0.155 3.845 9 H 0.015 0.985 10 C -0.534 4.534 11 H 0.096 0.904 12 C 0.075 3.925 13 N -0.895 5.895 14 Si 0.871 3.129 15 H -0.273 1.273 16 H -0.292 1.292 17 H -0.259 1.259 18 H 0.028 0.972 19 H 0.078 0.922 20 H 0.033 0.967 21 H 0.061 0.939 22 H 0.025 0.975 23 H 0.068 0.932 24 H 0.069 0.931 25 H 0.061 0.939 26 H 0.078 0.922 27 H 0.081 0.919 28 H 0.038 0.962 29 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.252 7.716 5.016 10.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.277 5.277 3 C -0.067 4.067 4 C -0.192 4.192 5 C -0.001 4.001 6 O -0.317 6.317 7 C -0.006 4.006 8 C 0.046 3.954 9 H 0.033 0.967 10 C -0.571 4.571 11 H 0.114 0.886 12 C -0.128 4.128 13 N -0.532 5.532 14 Si 0.699 3.301 15 H -0.200 1.200 16 H -0.219 1.219 17 H -0.184 1.184 18 H 0.047 0.953 19 H 0.096 0.904 20 H 0.052 0.948 21 H 0.080 0.920 22 H 0.043 0.957 23 H 0.086 0.914 24 H 0.088 0.912 25 H 0.079 0.921 26 H 0.096 0.904 27 H 0.099 0.901 28 H 0.056 0.944 29 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 5.503 7.341 5.182 10.537 hybrid contribution 0.253 0.329 -1.235 1.303 sum 5.756 7.670 3.947 10.370 Atomic orbital electron populations 1.22175 0.87385 1.01374 0.98615 1.60763 1.07945 1.09758 1.49222 1.22270 0.94167 0.90673 0.99582 1.22043 0.95624 0.99309 1.02255 1.22214 0.99052 0.85894 0.92927 1.86369 1.40206 1.40073 1.65019 1.22375 0.85801 0.92359 1.00099 1.20303 0.94354 0.92433 0.88281 0.96730 1.21497 1.01996 1.19265 1.14371 0.88645 1.24989 0.96508 0.94732 0.96574 1.69880 1.33655 1.22670 1.26995 0.87054 0.84479 0.79801 0.78723 1.19960 1.21920 1.18382 0.95349 0.90395 0.94775 0.92028 0.95683 0.91385 0.91214 0.92094 0.90397 0.90097 0.94374 0.92464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 1.07 8.29 60.06 0.50 1.57 15 2 N -0.55 -11.79 4.17 -235.74 -0.98 -12.78 15 3 C 0.06 1.08 5.42 -2.99 -0.02 1.06 15 4 C -0.15 -2.54 5.39 -27.53 -0.15 -2.69 15 5 C 0.08 1.29 6.49 36.17 0.23 1.52 15 6 O -0.40 -8.57 10.03 -21.27 -0.21 -8.78 15 7 C 0.07 1.68 5.27 37.91 0.20 1.88 15 8 C 0.15 3.79 1.55 -69.22 -0.11 3.68 15 9 H 0.02 0.39 5.68 -51.93 -0.30 0.10 15 10 C -0.53 -14.83 8.07 -34.45 -0.28 -15.11 15 11 H 0.10 2.78 5.14 -52.48 -0.27 2.51 15 12 C 0.07 2.15 5.44 -17.82 -0.10 2.05 15 13 N -0.89 -27.00 13.96 55.43 0.77 -26.22 15 14 Si 0.87 22.05 24.73 -169.99 -4.20 17.85 15 15 H -0.27 -6.76 6.84 56.52 0.39 -6.38 15 16 H -0.29 -7.34 7.11 56.52 0.40 -6.94 15 17 H -0.26 -6.53 6.39 56.52 0.36 -6.17 15 18 H 0.03 0.61 7.73 -51.93 -0.40 0.21 15 19 H 0.08 1.71 6.19 -51.93 -0.32 1.39 15 20 H 0.03 0.59 8.02 -51.93 -0.42 0.17 15 21 H 0.06 0.95 8.14 -51.93 -0.42 0.53 15 22 H 0.02 0.44 8.04 -51.93 -0.42 0.03 15 23 H 0.07 0.88 8.14 -51.93 -0.42 0.46 15 24 H 0.07 1.29 7.28 -51.93 -0.38 0.91 15 25 H 0.06 1.04 7.61 -51.93 -0.40 0.65 15 26 H 0.08 1.09 8.14 -51.93 -0.42 0.67 15 27 H 0.08 2.01 4.28 -51.93 -0.22 1.79 15 28 H 0.04 0.88 8.12 -51.93 -0.42 0.46 15 29 H 0.27 7.54 8.31 -40.82 -0.34 7.20 15 LS Contribution 219.98 15.07 3.32 3.32 Total: -1.00 -30.03 219.98 -5.02 -35.06 By element: Atomic # 1 Polarization: 1.59 SS G_CDS: -4.00 Total: -2.41 kcal Atomic # 6 Polarization: -6.32 SS G_CDS: 0.29 Total: -6.03 kcal Atomic # 7 Polarization: -38.79 SS G_CDS: -0.21 Total: -39.00 kcal Atomic # 8 Polarization: -8.57 SS G_CDS: -0.21 Total: -8.78 kcal Atomic # 14 Polarization: 22.05 SS G_CDS: -4.20 Total: 17.85 kcal Total LS contribution 3.32 Total: 3.32 kcal Total: -30.03 -5.02 -35.06 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260616476.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.717 kcal (2) G-P(sol) polarization free energy of solvation -30.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.059 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds