Wall clock time and date at job start Mon Mar 30 2020 01:45:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.35302 * 126.21635 * 2 1 4 4 Cl 1.73603 * 126.01518 * 359.97438 * 3 2 1 5 5 C 1.40219 * 107.96313 * 179.97438 * 3 2 1 6 6 N 1.30936 * 108.40839 * 0.02562 * 5 3 2 7 7 N 1.36351 * 126.21445 * 180.02562 * 2 1 3 8 8 C 1.37380 * 126.11415 * 0.03856 * 7 2 1 9 9 H 1.08001 * 120.00254 * 359.97438 * 8 7 2 10 10 C 1.38987 * 120.00275 * 179.97438 * 8 7 2 11 11 N 1.31291 * 119.99798 * 359.97438 * 10 8 7 12 12 Si 1.86806 * 120.00314 * 179.97438 * 10 8 7 13 13 H 1.48508 * 109.46813 * 90.00019 * 12 10 8 14 14 H 1.48493 * 109.47490 * 209.99868 * 12 10 8 15 15 H 1.48497 * 109.46756 * 330.00420 * 12 10 8 16 16 H 1.08994 * 109.47593 * 269.99852 * 1 2 3 17 17 H 1.09007 * 109.47336 * 29.99922 * 1 2 3 18 18 H 1.09003 * 109.47530 * 149.99568 * 1 2 3 19 19 H 1.08005 * 125.79259 * 180.02562 * 5 3 2 20 20 H 0.97009 * 119.99980 * 179.97438 * 11 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3063 1.0916 0.0000 4 17 1.7765 2.7448 -0.0006 5 6 3.6380 0.6524 0.0006 6 7 3.6415 -0.6569 0.0004 7 7 2.3125 -1.1001 -0.0005 8 6 1.8955 -2.4091 -0.0018 9 1 0.8404 -2.6397 -0.0022 10 6 2.8313 -3.4366 -0.0027 11 7 4.1140 -3.1563 -0.0028 12 14 2.2643 -5.2166 -0.0038 13 1 2.1137 -5.6872 -1.4043 14 1 3.2694 -6.0568 0.6954 15 1 0.9589 -5.3205 0.6963 16 1 -0.3634 0.0000 1.0276 17 1 -0.3634 0.8900 -0.5138 18 1 -0.3634 -0.8899 -0.5139 19 1 4.5122 1.2866 0.0011 20 1 4.7672 -3.8735 -0.0031 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000002537505.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:45:41 Heat of formation + Delta-G solvation = 59.592397 kcal Electronic energy + Delta-G solvation = -9280.646527 eV Core-core repulsion = 7311.891362 eV Total energy + Delta-G solvation = -1968.755165 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.025 amu Computer time = 0.08 seconds Orbital eigenvalues (eV) -39.59988 -35.32397 -33.55919 -31.35707 -29.79563 -25.59790 -25.05415 -20.56524 -19.08881 -17.10312 -15.43118 -14.60288 -13.94070 -13.42482 -13.02519 -12.32210 -11.91203 -11.70675 -11.36718 -11.16920 -10.88478 -10.86450 -10.56789 -10.03340 -9.41933 -8.83721 -8.16419 -7.08830 -6.64986 -4.36238 2.89663 3.00024 3.06089 3.38932 3.41096 3.85305 4.05036 4.71240 4.92411 5.96397 6.08772 6.30670 6.34224 6.66802 6.78606 7.01057 7.30607 7.68943 7.98702 8.54435 9.24535 9.49114 10.31250 Molecular weight = 186.03amu Principal moments of inertia in cm(-1) A = 0.082540 B = 0.012326 C = 0.010787 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 339.147612 B = 2271.065316 C = 2595.069057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 C -0.025 4.025 3 C -0.206 4.206 4 Cl -0.099 7.099 5 C -0.030 4.030 6 N -0.257 5.257 7 N -0.139 5.139 8 C -0.321 4.321 9 H 0.119 0.881 10 C 0.047 3.953 11 N -0.770 5.770 12 Si 0.936 3.064 13 H -0.269 1.269 14 H -0.275 1.275 15 H -0.262 1.262 16 H 0.057 0.943 17 H 0.064 0.936 18 H 0.060 0.940 19 H 0.158 0.842 20 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.503 1.722 -0.017 4.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.156 4.156 3 C -0.247 4.247 4 Cl -0.072 7.072 5 C -0.205 4.205 6 N -0.086 5.086 7 N 0.094 4.906 8 C -0.453 4.453 9 H 0.137 0.863 10 C -0.170 4.170 11 N -0.397 5.397 12 Si 0.759 3.241 13 H -0.195 1.195 14 H -0.200 1.200 15 H -0.187 1.187 16 H 0.076 0.924 17 H 0.083 0.917 18 H 0.079 0.921 19 H 0.175 0.825 20 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -3.566 0.670 -0.013 3.628 hybrid contribution -0.617 0.160 0.001 0.638 sum -4.183 0.830 -0.012 4.265 Atomic orbital electron populations 1.20000 0.89118 1.01793 1.01248 1.20181 0.93484 0.86704 1.15259 1.19876 0.93157 0.82851 1.28822 1.98174 1.90929 1.19726 1.98351 1.23473 0.95023 0.93638 1.08389 1.78316 0.96225 1.08091 1.25987 1.44619 1.02894 1.04054 1.39046 1.19940 0.94502 0.77728 1.53169 0.86325 1.25665 0.94821 1.01269 0.95251 1.70200 1.00505 1.33893 1.35089 0.85803 0.79174 0.79997 0.79093 1.19466 1.19988 1.18654 0.92385 0.91682 0.92127 0.82513 0.91331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.22 9.88 36.00 0.36 -0.87 14 2 C -0.02 -0.60 6.93 -81.63 -0.57 -1.17 14 3 C -0.21 -4.89 6.65 -39.88 -0.27 -5.16 14 4 Cl -0.10 -1.96 28.88 -51.86 -1.50 -3.45 14 5 C -0.03 -0.75 12.02 -17.19 -0.21 -0.96 14 6 N -0.26 -7.29 10.41 30.72 0.32 -6.97 14 7 N -0.14 -3.80 3.74 -7.81 -0.03 -3.83 14 8 C -0.32 -8.43 9.97 -14.79 -0.15 -8.58 14 9 H 0.12 2.80 7.07 -52.49 -0.37 2.43 14 10 C 0.05 1.20 5.50 -17.51 -0.10 1.11 14 11 N -0.77 -21.08 11.82 55.49 0.66 -20.43 14 12 Si 0.94 18.63 29.55 -169.99 -5.02 13.61 14 13 H -0.27 -5.28 7.11 56.52 0.40 -4.88 14 14 H -0.27 -5.42 7.11 56.52 0.40 -5.02 14 15 H -0.26 -5.01 7.11 56.52 0.40 -4.61 14 16 H 0.06 1.04 8.14 -51.93 -0.42 0.62 14 17 H 0.06 1.14 7.91 -51.93 -0.41 0.73 14 18 H 0.06 1.11 7.38 -51.93 -0.38 0.73 14 19 H 0.16 3.43 8.06 -52.48 -0.42 3.01 14 20 H 0.28 6.89 8.31 -40.82 -0.34 6.55 14 LS Contribution 203.53 15.07 3.07 3.07 Total: -1.00 -29.50 203.53 -4.58 -34.08 By element: Atomic # 1 Polarization: 0.70 SS G_CDS: -1.14 Total: -0.44 kcal Atomic # 6 Polarization: -14.71 SS G_CDS: -0.93 Total: -15.63 kcal Atomic # 7 Polarization: -32.17 SS G_CDS: 0.95 Total: -31.23 kcal Atomic # 14 Polarization: 18.63 SS G_CDS: -5.02 Total: 13.61 kcal Atomic # 17 Polarization: -1.96 SS G_CDS: -1.50 Total: -3.45 kcal Total LS contribution 3.07 Total: 3.07 kcal Total: -29.50 -4.58 -34.08 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000002537505.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.668 kcal (2) G-P(sol) polarization free energy of solvation -29.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.08 seconds