Wall clock time and date at job start Mon Mar 30 2020 01:43:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 O 1.33929 * 126.04053 * 2 1 4 4 C 1.34257 * 111.05484 * 180.02562 * 3 2 1 5 5 Cl 1.73598 * 125.15882 * 179.97438 * 4 3 2 6 6 C 1.34174 * 109.68125 * 359.97438 * 4 3 2 7 7 C 1.39002 * 126.04643 * 180.02562 * 2 1 3 8 8 C 1.41371 * 127.36186 * 359.97438 * 7 2 1 9 9 H 1.07995 * 120.00481 * 0.02884 * 8 7 2 10 10 C 1.39684 * 119.99818 * 180.02562 * 8 7 2 11 11 N 1.31041 * 119.99827 * 0.02562 * 10 8 7 12 12 Si 1.86794 * 120.00293 * 179.97438 * 10 8 7 13 13 H 1.48502 * 109.47197 * 0.02562 * 12 10 8 14 14 H 1.48506 * 109.46892 * 119.99723 * 12 10 8 15 15 H 1.48501 * 109.47527 * 239.99849 * 12 10 8 16 16 H 1.09005 * 109.47312 * 359.96667 * 1 2 3 17 17 H 1.08999 * 109.47715 * 119.97373 * 1 2 3 18 18 H 1.09005 * 109.46736 * 239.97625 * 1 2 3 19 19 H 1.07997 * 126.95741 * 179.74046 * 6 4 3 20 20 H 0.97001 * 120.00096 * 180.02562 * 11 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.2950 1.0829 0.0000 4 6 3.5919 0.7358 -0.0006 5 17 4.9245 1.8483 -0.0014 6 6 3.7017 -0.6015 -0.0004 7 6 2.3249 -1.1239 -0.0005 8 6 1.9213 -2.4787 -0.0006 9 1 0.8708 -2.7292 -0.0007 10 6 2.8812 -3.4935 -0.0006 11 7 4.1559 -3.1895 0.0000 12 14 2.3479 -5.2837 0.0000 13 1 0.8648 -5.3584 -0.0002 14 1 2.8772 -5.9582 -1.2126 15 1 2.8778 -5.9577 1.2125 16 1 -0.3634 1.0277 0.0006 17 1 -0.3634 -0.5134 -0.8902 18 1 -0.3633 -0.5142 0.8898 19 1 4.6149 -1.1779 -0.0046 20 1 4.8225 -3.8942 -0.0004 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000213724191.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:43:34 Heat of formation + Delta-G solvation = -25.161654 kcal Electronic energy + Delta-G solvation = -9206.419229 eV Core-core repulsion = 7201.696102 eV Total energy + Delta-G solvation = -2004.723127 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.019 amu Computer time = 0.08 seconds Orbital eigenvalues (eV) -42.40825 -37.70391 -35.91487 -32.94175 -31.95240 -28.60994 -26.00176 -22.31077 -20.73311 -19.20944 -17.44470 -16.71863 -16.38232 -15.23312 -14.35852 -14.24757 -13.70262 -13.60618 -12.99072 -12.92312 -12.76846 -12.49606 -12.43466 -11.74161 -11.46127 -11.44327 -9.96520 -8.95979 -8.53082 -6.28114 0.54502 1.03574 1.41742 1.42919 1.58261 2.09443 2.25895 3.17303 3.37146 4.56479 4.75719 4.88551 4.95932 5.08518 5.19356 5.42527 5.80575 5.85533 6.31169 6.73958 6.87770 7.03814 8.46239 Molecular weight = 186.02amu Principal moments of inertia in cm(-1) A = 0.049447 B = 0.013774 C = 0.010836 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 566.123223 B = 2032.285412 C = 2583.264221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.018 4.018 2 C -0.218 4.218 3 O -0.203 6.203 4 C -0.012 4.012 5 Cl 0.005 6.995 6 C -0.195 4.195 7 C -0.003 4.003 8 C -0.468 4.468 9 H 0.084 0.916 10 C 0.025 3.975 11 N -0.848 5.848 12 Si 0.995 3.005 13 H -0.255 1.255 14 H -0.269 1.269 15 H -0.268 1.268 16 H 0.071 0.929 17 H 0.068 0.932 18 H 0.068 0.932 19 H 0.159 0.841 20 H 0.284 0.716 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.537 1.414 -0.004 2.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C -0.266 4.266 3 O -0.106 6.106 4 C -0.087 4.087 5 Cl 0.033 6.967 6 C -0.217 4.217 7 C -0.006 4.006 8 C -0.499 4.499 9 H 0.102 0.898 10 C -0.187 4.187 11 N -0.477 5.477 12 Si 0.816 3.184 13 H -0.179 1.179 14 H -0.193 1.193 15 H -0.193 1.193 16 H 0.090 0.910 17 H 0.087 0.913 18 H 0.087 0.913 19 H 0.177 0.823 20 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -1.316 1.699 -0.004 2.149 hybrid contribution 0.491 -0.530 -0.001 0.722 sum -0.825 1.169 -0.005 1.431 Atomic orbital electron populations 1.19708 0.83648 1.02102 1.02029 1.23011 0.93639 0.82212 1.27779 1.83247 1.14413 1.36785 1.76137 1.22262 0.81400 0.89597 1.15457 1.98299 1.37147 1.63584 1.97637 1.23261 1.00458 0.90069 1.07893 1.19486 0.89985 0.94136 0.96946 1.19136 0.94768 0.89360 1.46643 0.89818 1.26791 0.94280 1.06127 0.91471 1.69800 1.02212 1.36421 1.39252 0.84957 0.79655 0.75259 0.78570 1.17876 1.19350 1.19344 0.91022 0.91336 0.91338 0.82339 0.90550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.02 -0.71 10.16 71.24 0.72 0.01 14 2 C -0.22 -11.05 7.49 25.87 0.19 -10.85 14 3 O -0.20 -10.30 10.53 1.52 0.02 -10.28 14 4 C -0.01 -0.60 7.85 66.89 0.53 -0.07 14 5 Cl 0.00 0.19 29.29 -2.72 -0.08 0.11 14 6 C -0.20 -10.64 9.86 23.72 0.23 -10.40 14 7 C 0.00 -0.15 6.11 -19.95 -0.12 -0.27 14 8 C -0.47 -25.38 9.19 23.39 0.22 -25.16 14 9 H 0.08 4.27 7.78 -2.91 -0.02 4.24 14 10 C 0.02 1.25 5.49 85.16 0.47 1.71 14 11 N -0.85 -44.81 10.46 21.79 0.23 -44.58 14 12 Si 0.99 38.51 29.56 68.60 2.03 40.54 14 13 H -0.26 -9.49 7.11 99.48 0.71 -8.78 14 14 H -0.27 -10.04 7.11 99.48 0.71 -9.33 14 15 H -0.27 -10.04 7.11 99.48 0.71 -9.33 14 16 H 0.07 2.40 8.14 -2.38 -0.02 2.38 14 17 H 0.07 2.50 8.14 -2.39 -0.02 2.48 14 18 H 0.07 2.50 8.14 -2.38 -0.02 2.48 14 19 H 0.16 8.88 6.08 -2.91 -0.02 8.86 14 20 H 0.28 13.57 8.30 -92.71 -0.77 12.80 14 Total: -1.00 -59.14 203.91 5.68 -53.46 By element: Atomic # 1 Polarization: 4.54 SS G_CDS: 1.25 Total: 5.79 kcal Atomic # 6 Polarization: -47.28 SS G_CDS: 2.24 Total: -45.04 kcal Atomic # 7 Polarization: -44.81 SS G_CDS: 0.23 Total: -44.58 kcal Atomic # 8 Polarization: -10.30 SS G_CDS: 0.02 Total: -10.28 kcal Atomic # 14 Polarization: 38.51 SS G_CDS: 2.03 Total: 40.54 kcal Atomic # 17 Polarization: 0.19 SS G_CDS: -0.08 Total: 0.11 kcal Total: -59.14 5.68 -53.46 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000213724191.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.298 kcal (2) G-P(sol) polarization free energy of solvation -59.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.460 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.08 seconds