Wall clock time and date at job start Mon Mar 30 2020 01:45:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35219 * 127.23492 * 2 1 4 4 Cl 1.73605 * 126.32382 * 359.96895 * 3 2 1 5 5 N 1.35943 * 107.34699 * 180.28210 * 3 2 1 6 6 H 0.97001 * 124.86407 * 179.72532 * 5 3 2 7 7 N 1.28464 * 110.27550 * 359.72575 * 5 3 2 8 8 C 1.32773 * 109.96517 * 359.97438 * 7 5 3 9 9 C 1.41421 * 126.56005 * 179.97438 * 8 7 5 10 10 H 1.08002 * 120.00026 * 188.17126 * 9 8 7 11 11 C 1.39848 * 120.00087 * 8.17499 * 9 8 7 12 12 N 1.30889 * 119.99955 * 191.06205 * 11 9 8 13 13 Si 1.86801 * 119.99818 * 11.05825 * 11 9 8 14 14 H 1.48496 * 109.47566 * 270.00008 * 13 11 9 15 15 H 1.48496 * 109.47006 * 30.00376 * 13 11 9 16 16 H 1.48501 * 109.46722 * 150.00102 * 13 11 9 17 17 H 1.09004 * 109.47082 * 270.16069 * 1 2 3 18 18 H 1.08995 * 109.47790 * 30.16036 * 1 2 3 19 19 H 1.09003 * 109.47283 * 150.16783 * 1 2 3 20 20 H 0.97002 * 119.99990 * 354.79372 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3252 1.0766 0.0000 4 17 1.8338 2.7416 -0.0008 5 7 3.6035 0.6141 -0.0064 6 1 4.3957 1.1739 -0.0116 7 7 3.6122 -0.6705 -0.0045 8 6 2.3674 -1.1323 0.0037 9 6 1.9727 -2.4903 0.0076 10 1 0.9322 -2.7506 -0.1186 11 6 2.9298 -3.4962 0.1751 12 7 2.6079 -4.7473 -0.0354 13 14 4.6675 -3.0541 0.6989 14 1 5.4999 -2.8067 -0.5056 15 1 4.6350 -1.8295 1.5382 16 1 5.2489 -4.1748 1.4808 17 1 -0.3633 0.0029 1.0277 18 1 -0.3634 0.8885 -0.5163 19 1 -0.3634 -0.8915 -0.5112 20 1 1.6886 -4.9849 -0.2335 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259463982.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:45:47 Heat of formation + Delta-G solvation = 41.980104 kcal Electronic energy + Delta-G solvation = -9307.840414 eV Core-core repulsion = 7338.321522 eV Total energy + Delta-G solvation = -1969.518891 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.025 amu Computer time = 0.07 seconds Orbital eigenvalues (eV) -40.88855 -36.19420 -33.61175 -31.91551 -29.84255 -26.10824 -25.27263 -20.47004 -18.95021 -17.69550 -17.22534 -14.53868 -14.20998 -13.58695 -12.70352 -12.24936 -12.10010 -12.01666 -11.54062 -11.26803 -10.91342 -10.74653 -10.22132 -9.51622 -9.05565 -8.56840 -7.96503 -7.59098 -7.01579 -4.41806 2.35155 2.88752 3.47417 3.54938 3.91923 4.05545 4.32174 4.53490 5.41876 5.98464 6.11858 6.46804 6.51389 6.64816 7.03330 7.26112 7.80816 8.02150 8.43112 8.55691 9.00306 9.58841 10.35660 Molecular weight = 186.03amu Principal moments of inertia in cm(-1) A = 0.065455 B = 0.014679 C = 0.012172 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 427.669047 B = 1906.980211 C = 2299.799814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 C -0.232 4.232 3 C 0.059 3.941 4 Cl -0.053 7.053 5 N -0.423 5.423 6 H 0.425 0.575 7 N -0.402 5.402 8 C 0.202 3.798 9 C -0.497 4.497 10 H 0.080 0.920 11 C 0.051 3.949 12 N -0.839 5.839 13 Si 1.102 2.898 14 H -0.284 1.284 15 H -0.261 1.261 16 H -0.310 1.310 17 H 0.050 0.950 18 H 0.046 0.954 19 H 0.060 0.940 20 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.527 9.821 0.650 9.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.246 4.246 3 C -0.094 4.094 4 Cl -0.025 7.025 5 N -0.132 5.132 6 H 0.265 0.735 7 N -0.239 5.239 8 C 0.057 3.943 9 C -0.537 4.537 10 H 0.099 0.901 11 C -0.167 4.167 12 N -0.466 5.466 13 Si 0.932 3.068 14 H -0.211 1.211 15 H -0.187 1.187 16 H -0.240 1.240 17 H 0.069 0.931 18 H 0.065 0.935 19 H 0.079 0.921 20 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.975 8.981 0.895 9.239 hybrid contribution -2.087 1.436 -0.402 2.565 sum -0.113 10.417 0.493 10.430 Atomic orbital electron populations 1.19790 0.90140 1.00821 1.00425 1.19903 0.95907 0.91024 1.17811 1.21721 0.88102 0.84451 1.15111 1.98295 1.90317 1.16206 1.97711 1.42930 1.04450 1.04959 1.60818 0.73451 1.73540 1.22451 0.90032 1.37851 1.19289 0.86446 0.93985 0.94621 1.19666 0.97019 0.88014 1.48970 0.90146 1.27090 1.06960 0.92210 0.90483 1.70641 1.22091 1.19231 1.34631 0.82970 0.72130 0.73731 0.78002 1.21099 1.18673 1.24005 0.93118 0.93468 0.92107 0.90991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -1.05 10.12 36.01 0.36 -0.68 14 2 C -0.23 -5.35 6.26 -104.17 -0.65 -6.01 14 3 C 0.06 1.22 7.86 -16.80 -0.13 1.09 14 4 Cl -0.05 -0.86 29.06 -51.86 -1.51 -2.36 14 5 N -0.42 -8.96 6.86 32.88 0.23 -8.73 14 6 H 0.42 7.24 8.96 -190.44 -1.71 5.53 14 7 N -0.40 -10.15 7.51 32.33 0.24 -9.91 14 8 C 0.20 5.36 6.46 -84.72 -0.55 4.81 14 9 C -0.50 -13.97 9.64 -37.77 -0.36 -14.33 14 10 H 0.08 2.27 7.69 -52.49 -0.40 1.87 14 11 C 0.05 1.42 5.51 -17.35 -0.10 1.33 14 12 N -0.84 -23.95 13.66 55.54 0.76 -23.20 14 13 Si 1.10 27.45 26.42 -169.99 -4.49 22.96 14 14 H -0.28 -7.04 7.11 56.52 0.40 -6.64 14 15 H -0.26 -6.46 6.24 56.52 0.35 -6.10 14 16 H -0.31 -7.55 7.11 56.52 0.40 -7.15 14 17 H 0.05 0.93 8.14 -51.93 -0.42 0.50 14 18 H 0.05 0.81 8.04 -51.93 -0.42 0.39 14 19 H 0.06 1.20 7.73 -51.93 -0.40 0.80 14 20 H 0.28 7.69 8.73 -40.82 -0.36 7.34 14 LS Contribution 199.10 15.07 3.00 3.00 Total: -1.00 -29.75 199.10 -5.75 -35.50 By element: Atomic # 1 Polarization: -0.91 SS G_CDS: -2.55 Total: -3.47 kcal Atomic # 6 Polarization: -12.37 SS G_CDS: -1.43 Total: -13.80 kcal Atomic # 7 Polarization: -43.06 SS G_CDS: 1.23 Total: -41.83 kcal Atomic # 14 Polarization: 27.45 SS G_CDS: -4.49 Total: 22.96 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.51 Total: -2.36 kcal Total LS contribution 3.00 Total: 3.00 kcal Total: -29.75 -5.75 -35.50 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259463982.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.484 kcal (2) G-P(sol) polarization free energy of solvation -29.755 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.504 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.07 seconds