Wall clock time and date at job start Mon Mar 30 2020 01:45:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.30459 * 125.73946 * 2 1 4 4 C 1.34285 * 109.41955 * 180.27013 * 3 2 1 5 5 C 1.34739 * 108.27085 * 359.72288 * 4 3 2 6 6 Cl 1.73608 * 126.59038 * 180.02562 * 5 4 3 7 7 N 1.36364 * 125.74022 * 179.79902 * 2 1 3 8 8 C 1.37580 * 126.51395 * 359.97438 * 7 2 1 9 9 H 1.08003 * 120.00153 * 326.24308 * 8 7 2 10 10 C 1.38929 * 120.00140 * 146.24368 * 8 7 2 11 11 N 1.31335 * 120.00097 * 331.63240 * 10 8 7 12 12 Si 1.86808 * 120.00010 * 151.64102 * 10 8 7 13 13 H 1.48501 * 109.46885 * 269.99665 * 12 10 8 14 14 H 1.48495 * 109.47338 * 29.99520 * 12 10 8 15 15 H 1.48494 * 109.47092 * 150.00045 * 12 10 8 16 16 H 1.08993 * 109.47183 * 270.20147 * 1 2 3 17 17 H 1.09004 * 109.46871 * 30.20381 * 1 2 3 18 18 H 1.08996 * 109.46852 * 150.19873 * 1 2 3 19 19 H 1.08005 * 125.86524 * 179.74684 * 4 3 2 20 20 H 0.97002 * 119.99930 * 356.27993 * 11 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2690 1.0589 0.0000 4 6 3.5577 0.6816 -0.0060 5 6 3.6036 -0.6650 -0.0037 6 17 5.0320 -1.6518 -0.0086 7 7 2.3035 -1.1068 0.0039 8 6 1.8842 -2.4172 0.0090 9 1 0.9791 -2.6925 0.5301 10 6 2.6249 -3.3862 -0.6562 11 7 3.3492 -3.0568 -1.7011 12 14 2.5905 -5.1577 -0.0645 13 1 3.6726 -5.3684 0.9304 14 1 1.2765 -5.4439 0.5653 15 1 2.7952 -6.0692 -1.2188 16 1 -0.3633 0.0036 1.0276 17 1 -0.3633 0.8882 -0.5170 18 1 -0.3633 -0.8917 -0.5107 19 1 4.4109 1.3438 -0.0113 20 1 3.3250 -2.1487 -2.0412 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260362902.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:45:48 Heat of formation + Delta-G solvation = 36.386660 kcal Electronic energy + Delta-G solvation = -9530.558134 eV Core-core repulsion = 7560.796693 eV Total energy + Delta-G solvation = -1969.761441 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.025 amu Computer time = 0.08 seconds Orbital eigenvalues (eV) -40.68568 -35.43676 -34.20755 -30.98018 -30.35175 -25.82511 -24.76358 -20.49313 -19.52367 -17.96439 -15.61346 -14.67201 -14.06584 -13.75935 -13.28498 -12.30746 -12.15583 -11.76317 -11.50187 -11.32998 -10.63052 -10.50146 -10.43287 -10.17109 -9.34761 -8.85279 -8.39945 -7.23863 -6.99947 -4.62332 2.98340 3.07951 3.15597 3.31475 3.38904 3.95513 4.11637 4.64959 4.94099 5.61371 6.15278 6.26925 6.31875 6.66189 6.76228 7.08174 7.65263 7.75041 7.97775 8.61296 9.08519 9.28638 10.09936 Molecular weight = 186.03amu Principal moments of inertia in cm(-1) A = 0.042073 B = 0.021475 C = 0.015369 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 665.353407 B = 1303.542076 C = 1821.424036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.040 4.040 2 C 0.119 3.881 3 N -0.506 5.506 4 C -0.047 4.047 5 C -0.021 4.021 6 Cl -0.032 7.032 7 N -0.252 5.252 8 C -0.450 4.450 9 H 0.106 0.894 10 C 0.035 3.965 11 N -0.802 5.802 12 Si 1.079 2.921 13 H -0.275 1.275 14 H -0.277 1.277 15 H -0.276 1.276 16 H 0.058 0.942 17 H 0.070 0.930 18 H 0.068 0.932 19 H 0.154 0.846 20 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.937 -0.992 2.194 2.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.137 4.137 3 N -0.227 5.227 4 C -0.203 4.203 5 C -0.169 4.169 6 Cl -0.004 7.004 7 N 0.081 4.919 8 C -0.578 4.578 9 H 0.124 0.876 10 C -0.183 4.183 11 N -0.426 5.426 12 Si 0.902 3.098 13 H -0.200 1.200 14 H -0.203 1.203 15 H -0.201 1.201 16 H 0.077 0.923 17 H 0.089 0.911 18 H 0.086 0.914 19 H 0.172 0.828 20 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.573 -1.918 1.860 2.733 hybrid contribution -0.017 0.577 0.244 0.627 sum -0.590 -1.341 2.104 2.564 Atomic orbital electron populations 1.19759 0.86381 1.02330 1.01437 1.22822 0.94733 0.81592 1.14554 1.69987 1.01106 1.28843 1.22718 1.21422 0.94791 0.90091 1.13985 1.21561 0.82016 0.91010 1.22299 1.98277 1.33205 1.71463 1.97484 1.41476 1.03055 1.06786 1.40625 1.20691 1.15409 0.81284 1.40452 0.87610 1.26693 0.92704 1.06552 0.92400 1.70574 1.33369 1.23635 1.14999 0.83366 0.77381 0.72381 0.76680 1.20039 1.20271 1.20099 0.92324 0.91100 0.91359 0.82832 0.89989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.04 -0.80 10.18 36.01 0.37 -0.43 14 2 C 0.12 2.98 7.91 -154.23 -1.22 1.76 14 3 N -0.51 -12.82 11.24 -10.47 -0.12 -12.94 14 4 C -0.05 -1.16 11.84 -17.72 -0.21 -1.37 14 5 C -0.02 -0.54 6.30 -16.33 -0.10 -0.64 14 6 Cl -0.03 -0.76 26.03 -51.86 -1.35 -2.11 14 7 N -0.25 -6.69 2.65 -55.70 -0.15 -6.84 14 8 C -0.45 -11.78 9.28 -14.72 -0.14 -11.92 14 9 H 0.11 2.65 7.97 -52.48 -0.42 2.23 14 10 C 0.04 0.90 4.25 -17.51 -0.07 0.83 14 11 N -0.80 -21.57 11.64 55.49 0.65 -20.92 14 12 Si 1.08 22.12 30.00 -169.99 -5.10 17.02 14 13 H -0.27 -5.56 7.11 56.52 0.40 -5.15 14 14 H -0.28 -5.29 7.11 56.52 0.40 -4.89 14 15 H -0.28 -5.58 7.11 56.52 0.40 -5.18 14 16 H 0.06 1.04 8.14 -51.93 -0.42 0.62 14 17 H 0.07 1.25 8.14 -51.93 -0.42 0.83 14 18 H 0.07 1.31 7.85 -51.93 -0.41 0.91 14 19 H 0.15 3.29 8.06 -52.48 -0.42 2.87 14 20 H 0.29 8.19 7.24 -40.82 -0.30 7.89 14 LS Contribution 200.06 15.07 3.01 3.01 Total: -1.00 -28.81 200.06 -5.62 -34.43 By element: Atomic # 1 Polarization: 1.31 SS G_CDS: -1.19 Total: 0.13 kcal Atomic # 6 Polarization: -10.40 SS G_CDS: -1.38 Total: -11.78 kcal Atomic # 7 Polarization: -41.07 SS G_CDS: 0.38 Total: -40.69 kcal Atomic # 14 Polarization: 22.12 SS G_CDS: -5.10 Total: 17.02 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.35 Total: -2.11 kcal Total LS contribution 3.01 Total: 3.01 kcal Total: -28.81 -5.62 -34.43 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260362902.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.813 kcal (2) G-P(sol) polarization free energy of solvation -28.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.003 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.426 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.08 seconds