Wall clock time and date at job start Mon Mar 30 2020 01:43:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 O 1.34286 * 125.39798 * 2 1 4 4 C 1.35089 * 109.39270 * 179.97438 * 3 2 1 5 5 C 1.39737 * 126.19022 * 179.97438 * 4 3 2 6 6 H 1.08003 * 119.99918 * 180.02562 * 5 4 3 7 7 C 1.40148 * 120.00151 * 0.02562 * 5 4 3 8 8 N 1.30802 * 119.99994 * 0.02562 * 7 5 4 9 9 Si 1.86798 * 120.00045 * 180.02562 * 7 5 4 10 10 H 1.48506 * 109.47240 * 90.00289 * 9 7 5 11 11 H 1.48501 * 109.47531 * 210.00254 * 9 7 5 12 12 H 1.48498 * 109.47398 * 330.00444 * 9 7 5 13 13 C 1.39555 * 107.61681 * 359.97438 * 4 3 2 14 14 C 1.35772 * 125.40803 * 179.97438 * 2 1 3 15 15 Cl 1.73602 * 126.33203 * 0.02562 * 14 2 1 16 16 H 1.08998 * 109.47154 * 359.97438 * 1 2 3 17 17 H 1.09002 * 109.46743 * 119.97771 * 1 2 3 18 18 H 1.09000 * 109.47254 * 239.97782 * 1 2 3 19 19 H 0.96999 * 120.00227 * 179.97438 * 8 7 5 20 20 H 1.08004 * 126.76311 * 179.73991 * 13 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.2849 1.0946 0.0000 4 6 3.5834 0.7222 0.0006 5 6 4.6875 1.5787 0.0002 6 1 5.6875 1.1707 0.0004 7 6 4.4972 2.9672 -0.0002 8 7 3.2861 3.4614 0.0002 9 14 5.9731 4.1122 -0.0014 10 1 6.3636 4.4151 -1.4018 11 1 5.6215 5.3739 0.6984 12 1 7.1078 3.4579 0.6983 13 6 3.6227 -0.6728 0.0015 14 6 2.2937 -1.1066 0.0005 15 17 1.7497 -2.7552 0.0006 16 1 -0.3633 1.0276 0.0005 17 1 -0.3633 -0.5135 -0.8902 18 1 -0.3634 -0.5142 0.8898 19 1 3.1544 4.4224 0.0002 20 1 4.5057 -1.2947 -0.0017 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260503290.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:43:31 Heat of formation + Delta-G solvation = -22.682981 kcal Electronic energy + Delta-G solvation = -9203.970035 eV Core-core repulsion = 7199.354391 eV Total energy + Delta-G solvation = -2004.615644 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.019 amu Computer time = 0.07 seconds Orbital eigenvalues (eV) -40.44458 -35.56781 -33.78863 -31.10147 -30.54773 -27.53485 -23.42536 -20.03512 -19.48707 -17.60748 -15.29901 -14.51483 -14.49329 -13.41356 -12.73463 -12.38340 -12.08191 -11.57062 -11.37333 -11.18964 -11.18167 -11.07245 -10.79672 -10.35684 -9.59304 -9.54048 -8.05552 -7.19499 -6.93496 -4.51824 2.83800 2.99718 3.04405 3.29705 3.32536 3.81238 3.86822 4.81446 5.11941 6.04628 6.29963 6.35688 6.49455 6.88261 6.96258 7.19768 7.42387 7.83800 7.95396 8.43425 8.57190 9.10321 10.05703 Molecular weight = 186.02amu Principal moments of inertia in cm(-1) A = 0.081866 B = 0.011538 C = 0.010168 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 341.938221 B = 2426.216843 C = 2753.011015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 C -0.142 4.142 3 O -0.144 6.144 4 C 0.215 3.785 5 C -0.441 4.441 6 H 0.106 0.894 7 C 0.067 3.933 8 N -0.775 5.775 9 Si 0.925 3.075 10 H -0.266 1.266 11 H -0.274 1.274 12 H -0.258 1.258 13 C -0.390 4.390 14 C -0.066 4.066 15 Cl -0.096 7.096 16 H 0.062 0.938 17 H 0.059 0.941 18 H 0.059 0.941 19 H 0.286 0.714 20 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.163 -1.493 -0.007 1.893 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.191 4.191 3 O -0.042 6.042 4 C 0.163 3.837 5 C -0.470 4.470 6 H 0.124 0.876 7 C -0.154 4.154 8 N -0.401 5.401 9 Si 0.749 3.251 10 H -0.191 1.191 11 H -0.199 1.199 12 H -0.182 1.182 13 C -0.411 4.411 14 C -0.094 4.094 15 Cl -0.068 7.068 16 H 0.081 0.919 17 H 0.078 0.922 18 H 0.078 0.922 19 H 0.097 0.903 20 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -1.492 -1.159 -0.003 1.890 hybrid contribution 0.642 0.147 -0.008 0.659 sum -0.850 -1.013 -0.011 1.322 Atomic orbital electron populations 1.19809 0.87627 1.01875 1.00921 1.21425 0.92919 0.84238 1.20537 1.84500 1.16208 1.30038 1.73443 1.19409 0.81509 0.90847 0.91962 1.18747 0.92241 0.89786 1.46257 0.87637 1.26149 0.97626 0.99406 0.92234 1.69763 1.22371 1.15134 1.32836 0.86017 0.80824 0.78826 0.79452 1.19100 1.19934 1.18224 1.21020 0.94150 0.93630 1.32339 1.20412 0.94505 0.82541 1.11916 1.98204 1.90339 1.20581 1.97696 0.91902 0.92218 0.92219 0.90329 0.86169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.90 10.18 36.01 0.37 -0.53 14 2 C -0.14 -3.55 7.32 -35.19 -0.26 -3.81 14 3 O -0.14 -4.10 8.97 3.54 0.03 -4.07 14 4 C 0.22 6.06 6.79 -38.53 -0.26 5.80 14 5 C -0.44 -11.77 9.32 -38.31 -0.36 -12.13 14 6 H 0.11 2.61 7.85 -52.48 -0.41 2.20 14 7 C 0.07 1.68 5.50 -17.27 -0.09 1.58 14 8 N -0.78 -20.39 12.01 55.56 0.67 -19.72 14 9 Si 0.93 18.22 29.56 -169.99 -5.03 13.20 14 10 H -0.27 -5.14 7.11 56.52 0.40 -4.74 14 11 H -0.27 -5.26 7.11 56.52 0.40 -4.86 14 12 H -0.26 -4.97 7.11 56.52 0.40 -4.57 14 13 C -0.39 -10.34 10.94 -38.51 -0.42 -10.76 14 14 C -0.07 -1.64 6.68 -39.88 -0.27 -1.90 14 15 Cl -0.10 -1.98 29.06 -51.86 -1.51 -3.48 14 16 H 0.06 1.18 8.14 -51.93 -0.42 0.75 14 17 H 0.06 1.06 8.14 -51.93 -0.42 0.64 14 18 H 0.06 1.06 8.14 -51.93 -0.42 0.64 14 19 H 0.29 6.72 8.30 -40.82 -0.34 6.39 14 20 H 0.12 3.00 8.06 -52.48 -0.42 2.58 14 LS Contribution 206.28 15.07 3.11 3.11 Total: -1.00 -28.44 206.28 -5.25 -33.69 By element: Atomic # 1 Polarization: 0.26 SS G_CDS: -1.24 Total: -0.98 kcal Atomic # 6 Polarization: -20.45 SS G_CDS: -1.29 Total: -21.75 kcal Atomic # 7 Polarization: -20.39 SS G_CDS: 0.67 Total: -19.72 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: 0.03 Total: -4.07 kcal Atomic # 14 Polarization: 18.22 SS G_CDS: -5.03 Total: 13.20 kcal Atomic # 17 Polarization: -1.98 SS G_CDS: -1.51 Total: -3.48 kcal Total LS contribution 3.11 Total: 3.11 kcal Total: -28.44 -5.25 -33.69 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260503290.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.010 kcal (2) G-P(sol) polarization free energy of solvation -28.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.07 seconds