Wall clock time and date at job start Mon Mar 30 2020 01:46:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 N 1.28473 * 124.86531 * 2 1 4 4 C 1.32760 * 109.96841 * 179.97438 * 3 2 1 5 5 C 1.41419 * 126.55937 * 180.02562 * 4 3 2 6 6 H 1.08010 * 119.99953 * 174.34661 * 5 4 3 7 7 C 1.39848 * 120.00357 * 354.34575 * 5 4 3 8 8 N 1.30892 * 119.99586 * 6.02239 * 7 5 4 9 9 Si 1.86799 * 120.00390 * 186.02415 * 7 5 4 10 10 H 1.48497 * 109.47332 * 94.97766 * 9 7 5 11 11 H 1.48498 * 109.47256 * 214.98377 * 9 7 5 12 12 H 1.48509 * 109.46832 * 334.97760 * 9 7 5 13 13 C 1.42217 * 106.88086 * 0.02562 * 4 3 2 14 14 C 1.35222 * 105.53398 * 359.97438 * 13 4 3 15 15 Cl 1.73593 * 126.32817 * 180.02562 * 14 13 4 16 16 H 1.09004 * 109.46738 * 90.02549 * 1 2 3 17 17 H 1.08996 * 109.47014 * 210.01988 * 1 2 3 18 18 H 1.08999 * 109.46946 * 330.02804 * 1 2 3 19 19 H 0.97001 * 120.00020 * 179.97438 * 8 7 5 20 20 H 1.07997 * 127.22936 * 180.02562 * 13 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1995 1.0541 0.0000 4 6 3.4824 0.7128 0.0006 5 6 4.5885 1.5940 0.0012 6 1 5.5909 1.2025 0.0938 7 6 4.3846 2.9724 -0.1179 8 7 3.1687 3.4570 -0.1114 9 14 5.8473 4.1220 -0.2864 10 1 6.1008 4.3931 -1.7242 11 1 5.5568 5.3986 0.4144 12 1 7.0471 3.4880 0.3169 13 6 3.5317 -0.7085 0.0003 14 6 2.2422 -1.1155 0.0002 15 17 1.6824 -2.7587 0.0006 16 1 -0.3633 -0.0005 -1.0277 17 1 -0.3633 -0.8898 0.5141 18 1 -0.3633 0.8902 0.5134 19 1 3.0271 4.4131 -0.1937 20 1 4.4137 -1.3317 0.0010 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000261049828.mol2 20 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:46:27 Heat of formation + Delta-G solvation = 44.267212 kcal Electronic energy + Delta-G solvation = -9215.837910 eV Core-core repulsion = 7246.418195 eV Total energy + Delta-G solvation = -1969.419715 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 186.025 amu Computer time = 0.08 seconds Orbital eigenvalues (eV) -42.37723 -37.57500 -35.54122 -33.46663 -30.49192 -29.22207 -25.98402 -21.97658 -21.58279 -18.92957 -17.57962 -16.56120 -16.44983 -15.17797 -14.61913 -14.35829 -13.64475 -13.26019 -13.01415 -12.81771 -12.60745 -12.48417 -12.25796 -11.76823 -11.11213 -10.50668 -9.51561 -9.32082 -8.32670 -6.28382 0.89670 1.39652 1.43103 1.45975 1.60541 2.31585 2.33649 2.47665 3.54824 4.02239 4.43414 4.61572 4.81782 5.00700 5.20443 5.39621 5.70319 6.26614 6.59416 6.88012 7.13954 8.15924 8.67715 Molecular weight = 186.03amu Principal moments of inertia in cm(-1) A = 0.083573 B = 0.011577 C = 0.010233 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 334.955527 B = 2417.956458 C = 2735.571767 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.095 3.905 2 N -0.332 5.332 3 N -0.348 5.348 4 C 0.158 3.842 5 C -0.483 4.483 6 H 0.086 0.914 7 C 0.024 3.976 8 N -0.822 5.822 9 Si 0.988 3.012 10 H -0.268 1.268 11 H -0.274 1.274 12 H -0.255 1.255 13 C -0.292 4.292 14 C 0.049 3.951 15 Cl -0.016 7.016 16 H 0.080 0.920 17 H 0.103 0.897 18 H 0.086 0.914 19 H 0.274 0.726 20 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.024 -5.822 -0.107 6.561 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.045 4.045 2 N -0.119 5.119 3 N -0.182 5.182 4 C 0.010 3.990 5 C -0.522 4.522 6 H 0.104 0.896 7 C -0.190 4.190 8 N -0.451 5.451 9 Si 0.809 3.191 10 H -0.193 1.193 11 H -0.199 1.199 12 H -0.179 1.179 13 C -0.324 4.324 14 C -0.104 4.104 15 Cl 0.012 6.988 16 H 0.099 0.901 17 H 0.121 0.879 18 H 0.104 0.896 19 H 0.084 0.916 20 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.174 -4.899 -0.107 6.437 hybrid contribution 0.860 -0.364 -0.089 0.938 sum -3.314 -5.263 -0.196 6.223 Atomic orbital electron populations 1.21987 0.73623 1.04915 1.03988 1.46076 1.07983 1.01565 1.56270 1.74769 1.03744 1.07589 1.32099 1.19640 0.91293 0.90955 0.97149 1.18947 0.92349 0.91155 1.49753 0.89562 1.26725 0.99503 1.00163 0.92634 1.70080 1.23425 1.14089 1.37496 0.85109 0.78139 0.76953 0.78869 1.19309 1.19888 1.17885 1.21523 0.94890 0.95514 1.20509 1.22128 0.91504 0.82566 1.14202 1.98276 1.89790 1.13143 1.97586 0.90142 0.87866 0.89566 0.91634 0.83483 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 3.22 11.15 127.77 1.42 4.65 14 2 N -0.33 -15.63 3.72 -358.70 -1.34 -16.97 14 3 N -0.35 -19.94 10.26 -51.62 -0.53 -20.47 14 4 C 0.16 9.18 6.78 40.77 0.28 9.45 14 5 C -0.48 -27.93 9.41 23.44 0.22 -27.71 14 6 H 0.09 4.67 7.85 -2.91 -0.02 4.65 14 7 C 0.02 1.33 5.49 85.22 0.47 1.79 14 8 N -0.82 -47.67 12.00 21.81 0.26 -47.41 14 9 Si 0.99 41.22 29.56 68.60 2.03 43.24 14 10 H -0.27 -10.82 7.11 99.48 0.71 -10.11 14 11 H -0.27 -10.98 7.11 99.48 0.71 -10.27 14 12 H -0.26 -10.13 7.11 99.48 0.71 -9.43 14 13 C -0.29 -14.65 10.96 22.56 0.25 -14.40 14 14 C 0.05 2.18 7.45 83.36 0.62 2.80 14 15 Cl -0.02 -0.51 28.69 -2.72 -0.08 -0.59 14 16 H 0.08 2.42 8.14 -2.39 -0.02 2.40 14 17 H 0.10 2.79 7.73 -2.39 -0.02 2.77 14 18 H 0.09 2.88 8.14 -2.39 -0.02 2.86 14 19 H 0.27 14.51 8.30 -92.71 -0.77 13.74 14 20 H 0.15 6.64 8.06 -2.91 -0.02 6.62 14 Total: -1.00 -67.25 205.01 4.85 -62.39 By element: Atomic # 1 Polarization: 1.97 SS G_CDS: 1.25 Total: 3.22 kcal Atomic # 6 Polarization: -26.68 SS G_CDS: 3.26 Total: -23.42 kcal Atomic # 7 Polarization: -83.25 SS G_CDS: -1.60 Total: -84.85 kcal Atomic # 14 Polarization: 41.22 SS G_CDS: 2.03 Total: 43.24 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -0.08 Total: -0.59 kcal Total: -67.25 4.85 -62.39 kcal The number of atoms in the molecule is 20 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261049828.mol2 20 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.661 kcal (2) G-P(sol) polarization free energy of solvation -67.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -62.394 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.08 seconds