Wall clock time and date at job start Mon Mar 30 2020 01:55:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09005 * 115.54849 * 2 1 4 4 C 1.53002 * 117.49806 * 214.29027 * 2 1 3 5 5 F 1.39901 * 117.50051 * 0.02562 * 4 2 1 6 6 Cl 1.80302 * 117.49544 * 145.02307 * 4 2 1 7 7 C 1.52998 * 117.49766 * 145.66701 * 2 1 3 8 8 C 1.52995 * 117.50088 * 0.02562 * 7 2 1 9 9 C 1.50705 * 117.49492 * 215.00239 * 7 2 1 10 10 H 1.07997 * 120.00189 * 245.14825 * 9 7 2 11 11 C 1.37877 * 119.99897 * 65.15916 * 9 7 2 12 12 N 1.31515 * 119.99973 * 5.22293 * 11 9 7 13 13 Si 1.86802 * 120.00022 * 185.23464 * 11 9 7 14 14 H 1.48502 * 109.47025 * 59.98851 * 13 11 9 15 15 H 1.48491 * 109.47256 * 179.97438 * 13 11 9 16 16 H 1.48499 * 109.46825 * 299.99596 * 13 11 9 17 17 H 1.08993 * 109.47612 * 274.33405 * 1 2 3 18 18 H 1.09004 * 109.47244 * 154.33130 * 1 2 3 19 19 H 1.08999 * 109.47166 * 34.33624 * 1 2 3 20 20 H 1.08998 * 109.47547 * 54.90517 * 8 7 2 21 21 H 1.09003 * 109.47350 * 174.91006 * 8 7 2 22 22 H 1.09008 * 109.47140 * 294.90820 * 8 7 2 23 23 H 0.97004 * 119.99582 * 180.02562 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 2.0001 0.9835 0.0000 4 6 2.2364 -1.1213 -0.7646 5 9 1.4340 -2.0678 -1.4107 6 17 3.7832 -0.7149 -1.5972 7 6 2.2364 -1.1207 0.7654 8 6 1.3588 -2.1559 1.4718 9 6 3.5290 -0.7803 1.4616 10 1 4.4531 -1.2356 1.1374 11 6 3.5317 0.1122 2.5125 12 7 2.3958 0.5877 2.9743 13 14 5.1488 0.6461 3.2802 14 1 5.9931 1.3023 2.2498 15 1 4.8808 1.6034 4.3833 16 1 5.8580 -0.5429 3.8175 17 1 -0.3634 0.0777 1.0246 18 1 -0.3634 -0.9263 -0.4452 19 1 -0.3633 0.8486 -0.5796 20 1 0.6668 -2.5961 0.7539 21 1 1.9889 -2.9379 1.8955 22 1 0.7955 -1.6712 2.2692 23 1 2.3978 1.2159 3.7134 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000669380732.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:55:06 Heat of formation + Delta-G solvation = -42.821345 kcal Electronic energy + Delta-G solvation = -10538.832805 eV Core-core repulsion = 8327.949156 eV Total energy + Delta-G solvation = -2210.883650 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 192.041 amu Computer time = 0.07 seconds Orbital eigenvalues (eV) -46.97606 -36.92298 -34.79948 -32.17743 -28.62467 -26.65016 -24.98141 -20.05956 -18.84822 -16.72886 -15.25709 -15.03905 -14.48141 -13.96652 -13.14775 -12.41326 -11.96373 -11.53977 -11.45540 -11.27320 -11.04364 -10.99363 -10.87974 -10.58649 -10.41106 -10.01206 -9.55409 -8.72174 -8.37565 -8.22670 -6.15787 -4.21061 2.69230 3.28463 3.32637 3.36765 4.31587 4.60757 5.04936 5.30927 5.72482 5.80821 6.15484 6.41860 6.47270 6.59810 6.76621 6.88066 7.00807 7.19310 7.49502 7.79892 8.17227 8.79603 9.44260 10.93374 Molecular weight = 192.04amu Principal moments of inertia in cm(-1) A = 0.040070 B = 0.017304 C = 0.014080 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 698.615593 B = 1617.747300 C = 1988.115883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.120 4.120 3 H 0.112 0.888 4 C 0.065 3.935 5 F -0.174 7.174 6 Cl -0.145 7.145 7 C 0.081 3.919 8 C -0.110 4.110 9 C -0.498 4.498 10 H 0.072 0.928 11 C 0.075 3.925 12 N -0.878 5.878 13 Si 0.896 3.104 14 H -0.274 1.274 15 H -0.287 1.287 16 H -0.275 1.275 17 H 0.070 0.930 18 H 0.051 0.949 19 H 0.047 0.953 20 H 0.030 0.970 21 H 0.050 0.950 22 H 0.067 0.933 23 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.669 -0.987 -3.578 4.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.140 4.140 3 H 0.130 0.870 4 C 0.022 3.978 5 F -0.154 7.154 6 Cl -0.118 7.118 7 C 0.080 3.920 8 C -0.168 4.168 9 C -0.535 4.535 10 H 0.090 0.910 11 C -0.129 4.129 12 N -0.514 5.514 13 Si 0.723 3.277 14 H -0.199 1.199 15 H -0.212 1.212 16 H -0.200 1.200 17 H 0.089 0.911 18 H 0.070 0.930 19 H 0.066 0.934 20 H 0.049 0.951 21 H 0.070 0.930 22 H 0.086 0.914 23 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -1.659 -0.859 -3.520 3.985 hybrid contribution 0.848 0.343 0.123 0.922 sum -0.811 -0.517 -3.397 3.530 Atomic orbital electron populations 1.21272 0.93627 1.00611 1.02086 1.23375 0.94366 0.96119 1.00131 0.86980 1.24996 0.84039 0.96340 0.92451 1.92742 1.72700 1.66363 1.83636 1.98672 1.37203 1.93879 1.82087 1.20149 0.96473 0.92745 0.82640 1.21347 0.98098 0.97797 0.99558 1.20346 0.91295 1.26360 1.15523 0.91036 1.24901 0.96488 0.95402 0.96084 1.69982 1.25143 1.30690 1.25562 0.86586 0.83709 0.78646 0.78752 1.19947 1.21244 1.20032 0.91147 0.93012 0.93440 0.95050 0.93041 0.91390 0.92713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.28 9.16 37.16 0.34 -1.94 14 2 C -0.12 -2.69 5.69 -90.62 -0.52 -3.21 14 3 H 0.11 2.67 8.14 -51.93 -0.42 2.24 14 4 C 0.06 1.46 4.26 -26.73 -0.11 1.35 14 5 F -0.17 -3.80 15.44 2.25 0.03 -3.76 14 6 Cl -0.14 -3.13 28.34 -51.86 -1.47 -4.60 14 7 C 0.08 1.96 1.85 -155.66 -0.29 1.67 14 8 C -0.11 -2.46 8.83 37.16 0.33 -2.13 14 9 C -0.50 -13.01 7.89 -34.44 -0.27 -13.28 14 10 H 0.07 1.90 7.71 -52.49 -0.40 1.49 14 11 C 0.08 1.97 5.42 -17.82 -0.10 1.87 14 12 N -0.88 -23.43 13.10 55.43 0.73 -22.70 14 13 Si 0.90 20.53 29.54 -169.99 -5.02 15.51 14 14 H -0.27 -6.31 7.11 56.52 0.40 -5.90 14 15 H -0.29 -6.52 7.11 56.52 0.40 -6.12 14 16 H -0.27 -6.25 7.11 56.52 0.40 -5.85 14 17 H 0.07 1.38 8.14 -51.93 -0.42 0.95 14 18 H 0.05 0.95 6.79 -51.93 -0.35 0.60 14 19 H 0.05 0.80 8.14 -51.93 -0.42 0.38 14 20 H 0.03 0.63 6.80 -51.93 -0.35 0.28 14 21 H 0.05 1.12 8.12 -51.93 -0.42 0.70 14 22 H 0.07 1.55 8.14 -51.92 -0.42 1.13 14 23 H 0.26 6.76 8.31 -40.82 -0.34 6.42 14 LS Contribution 221.14 15.07 3.33 3.33 Total: -1.00 -26.20 221.14 -5.37 -31.57 By element: Atomic # 1 Polarization: -1.32 SS G_CDS: -2.36 Total: -3.68 kcal Atomic # 6 Polarization: -15.05 SS G_CDS: -0.62 Total: -15.67 kcal Atomic # 7 Polarization: -23.43 SS G_CDS: 0.73 Total: -22.70 kcal Atomic # 9 Polarization: -3.80 SS G_CDS: 0.03 Total: -3.76 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -5.02 Total: 15.51 kcal Atomic # 17 Polarization: -3.13 SS G_CDS: -1.47 Total: -4.60 kcal Total LS contribution 3.33 Total: 3.33 kcal Total: -26.20 -5.37 -31.57 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000669380732.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.247 kcal (2) G-P(sol) polarization free energy of solvation -26.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.07 seconds