Wall clock time and date at job start Mon Mar 30 2020 02:49:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30066 * 124.83740 * 2 1 4 4 C 1.36125 * 109.66509 * 179.97438 * 3 2 1 5 5 N 1.31690 * 145.48548 * 180.02562 * 4 3 2 6 6 O 1.41497 * 109.03868 * 179.97438 * 5 4 3 7 7 C 1.35232 * 108.35525 * 359.97182 * 6 5 4 8 8 C 1.39257 * 126.37728 * 180.02562 * 7 6 5 9 9 H 1.08002 * 120.00087 * 180.02562 * 8 7 6 10 10 C 1.40492 * 120.00389 * 359.97438 * 8 7 6 11 11 N 1.30582 * 119.99480 * 0.02562 * 10 8 7 12 12 Si 1.86799 * 120.00414 * 180.02562 * 10 8 7 13 13 H 1.48494 * 109.47215 * 0.02562 * 12 10 8 14 14 H 1.48497 * 109.47078 * 120.00685 * 12 10 8 15 15 H 1.48500 * 109.47074 * 240.00283 * 12 10 8 16 16 C 1.39932 * 107.24915 * 0.02562 * 7 6 5 17 17 N 1.36024 * 124.84555 * 179.69545 * 2 1 3 18 18 H 0.96998 * 126.23346 * 0.02562 * 17 2 1 19 19 H 1.08999 * 109.46995 * 90.02415 * 1 2 3 20 20 H 1.08994 * 109.46790 * 210.02101 * 1 2 3 21 21 H 1.08997 * 109.47305 * 330.02542 * 1 2 3 22 22 H 0.97001 * 120.00143 * 179.97438 * 11 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2501 1.0676 0.0000 4 6 3.5639 0.7113 0.0006 5 7 4.8064 1.1475 0.0013 6 8 5.6850 0.0383 0.0021 7 6 4.9432 -1.0925 0.0025 8 6 5.4277 -2.3981 0.0039 9 1 4.7387 -3.2298 0.0037 10 6 6.8128 -2.6335 0.0044 11 7 7.6458 -1.6279 0.0041 12 14 7.4626 -4.3847 0.0054 13 1 6.3223 -5.3359 0.0050 14 1 8.2916 -4.6058 -1.2066 15 1 8.2908 -4.6047 1.2183 16 6 3.5982 -0.7064 0.0014 17 7 2.2843 -1.1163 0.0059 18 1 1.9697 -2.0339 0.0105 19 1 -0.3633 -0.0004 -1.0277 20 1 -0.3633 -0.8898 0.5141 21 1 -0.3634 0.8902 0.5134 22 1 8.6021 -1.7903 0.0048 RHF calculation, no. of doubly occupied orbitals= 34 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260027029.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:49:05 Heat of formation + Delta-G solvation = 82.992256 kcal Electronic energy + Delta-G solvation = -11508.688628 eV Core-core repulsion = 9260.187566 eV Total energy + Delta-G solvation = -2248.501062 eV No. of doubly occupied orbitals = 34 Molecular weight (most abundant/longest-lived isotopes) = 193.059 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.94855 -37.94088 -34.16152 -31.64897 -31.13480 -29.22296 -28.34551 -25.02831 -20.96574 -20.21818 -19.48119 -17.81086 -16.11346 -15.25518 -14.81967 -14.63887 -13.81655 -13.34683 -12.96514 -12.35574 -12.07504 -11.88862 -11.56697 -11.55755 -11.18358 -10.58392 -10.08012 -9.82722 -9.53271 -8.58122 -7.98150 -7.29248 -7.20345 -4.91282 2.28797 2.78640 2.80680 2.88162 3.54413 3.56194 3.88859 4.40891 4.43011 4.81182 5.16160 5.52230 5.73667 5.79886 6.03068 6.55196 6.56818 6.71394 7.22627 7.35551 7.80302 7.99340 8.17254 8.58488 8.99979 9.37953 9.66556 Molecular weight = 193.06amu Principal moments of inertia in cm(-1) A = 0.062634 B = 0.011269 C = 0.009600 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 446.934697 B = 2484.192940 C = 2915.983975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 C 0.289 3.711 3 N -0.517 5.517 4 C 0.245 3.755 5 N -0.433 5.433 6 O -0.066 6.066 7 C 0.264 3.736 8 C -0.407 4.407 9 H 0.106 0.894 10 C 0.062 3.938 11 N -0.729 5.729 12 Si 0.935 3.065 13 H -0.255 1.255 14 H -0.265 1.265 15 H -0.265 1.265 16 C -0.271 4.271 17 N -0.566 5.566 18 H 0.405 0.595 19 H 0.080 0.920 20 H 0.073 0.927 21 H 0.089 0.911 22 H 0.297 0.703 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.353 -7.132 0.012 9.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C 0.021 3.979 3 N -0.255 5.255 4 C -0.013 4.013 5 N -0.210 5.210 6 O -0.063 6.063 7 C 0.199 3.801 8 C -0.437 4.437 9 H 0.124 0.876 10 C -0.166 4.166 11 N -0.352 5.352 12 Si 0.757 3.243 13 H -0.179 1.179 14 H -0.190 1.190 15 H -0.190 1.190 16 C -0.382 4.382 17 N -0.184 5.184 18 H 0.241 0.759 19 H 0.099 0.901 20 H 0.091 0.909 21 H 0.108 0.892 22 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -5.381 -5.086 0.014 7.404 hybrid contribution -0.058 -2.671 -0.006 2.672 sum -5.440 -7.757 0.009 9.474 Atomic orbital electron populations 1.20226 0.85373 1.03771 1.03368 1.23448 0.94846 0.81254 0.98371 1.70087 0.98306 1.26716 1.30348 1.21558 0.92380 0.90616 0.96747 1.80572 0.95320 0.98833 1.46289 1.89511 1.27772 1.10748 1.78280 1.18700 0.84859 0.88892 0.87687 1.19074 0.92727 0.90149 1.41727 0.87581 1.26399 0.96790 1.01103 0.92299 1.69689 1.05445 1.33754 1.26317 0.85803 0.79746 0.79457 0.79331 1.17862 1.18987 1.18982 1.20051 0.86412 0.94519 1.37239 1.41520 1.04124 1.07723 1.65072 0.75905 0.90134 0.90863 0.89196 0.89141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.86 10.51 36.01 0.38 -0.48 14 2 C 0.29 5.81 8.06 -154.87 -1.25 4.56 14 3 N -0.52 -13.09 11.28 -9.67 -0.11 -13.20 14 4 C 0.24 7.07 9.16 -157.33 -1.44 5.63 14 5 N -0.43 -13.44 12.95 31.01 0.40 -13.04 14 6 O -0.07 -2.04 10.44 6.42 0.07 -1.98 14 7 C 0.26 7.42 6.88 -38.57 -0.27 7.15 14 8 C -0.41 -10.15 9.32 -38.35 -0.36 -10.51 14 9 H 0.11 2.37 7.85 -52.49 -0.41 1.95 14 10 C 0.06 1.44 5.50 -17.23 -0.09 1.35 14 11 N -0.73 -18.26 12.01 55.58 0.67 -17.60 14 12 Si 0.93 16.53 29.57 -169.99 -5.03 11.50 14 13 H -0.26 -4.35 7.11 56.52 0.40 -3.95 14 14 H -0.27 -4.60 7.11 56.52 0.40 -4.20 14 15 H -0.27 -4.60 7.11 56.52 0.40 -4.20 14 16 C -0.27 -7.25 8.08 -83.26 -0.67 -7.93 14 17 N -0.57 -11.85 6.20 -7.51 -0.05 -11.90 14 18 H 0.41 6.69 8.96 -40.82 -0.37 6.33 14 19 H 0.08 0.87 8.14 -51.93 -0.42 0.44 14 20 H 0.07 0.70 8.14 -51.93 -0.42 0.28 14 21 H 0.09 1.06 8.14 -51.93 -0.42 0.64 14 22 H 0.30 6.48 8.29 -40.82 -0.34 6.14 14 LS Contribution 210.81 15.07 3.18 3.18 Total: -1.00 -34.07 210.81 -5.75 -39.82 By element: Atomic # 1 Polarization: 4.63 SS G_CDS: -1.18 Total: 3.45 kcal Atomic # 6 Polarization: 3.47 SS G_CDS: -3.70 Total: -0.23 kcal Atomic # 7 Polarization: -56.65 SS G_CDS: 0.91 Total: -55.73 kcal Atomic # 8 Polarization: -2.04 SS G_CDS: 0.07 Total: -1.98 kcal Atomic # 14 Polarization: 16.53 SS G_CDS: -5.03 Total: 11.50 kcal Total LS contribution 3.18 Total: 3.18 kcal Total: -34.07 -5.75 -39.82 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260027029.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 122.811 kcal (2) G-P(sol) polarization free energy of solvation -34.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.818 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds