Wall clock time and date at job start Mon Mar 30 2020 03:03:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31517 * 1 3 3 Si 1.86800 * 120.00482 * 2 1 4 4 H 1.48497 * 109.47190 * 240.00663 * 3 2 1 5 5 H 1.48500 * 109.46578 * 0.02562 * 3 2 1 6 6 H 1.48494 * 109.47411 * 120.00194 * 3 2 1 7 7 C 1.37879 * 119.99739 * 180.02562 * 2 1 3 8 8 H 1.07999 * 119.99874 * 179.97438 * 7 2 1 9 9 C 1.50703 * 119.99998 * 0.02562 * 7 2 1 10 10 H 1.09003 * 110.41963 * 302.30933 * 9 7 2 11 11 C 1.54901 * 110.37614 * 64.62489 * 9 7 2 12 12 C 1.55138 * 101.65557 * 155.90276 * 11 9 7 13 13 C 1.54328 * 103.01599 * 324.34514 * 12 11 9 14 14 N 1.47437 * 107.23204 * 22.28547 * 13 12 11 15 15 C 1.46897 * 111.00274 * 123.26030 * 14 13 12 16 16 C 1.53780 * 113.61751 * 170.58515 * 15 14 13 17 17 C 1.53781 * 87.08134 * 220.01663 * 16 15 14 18 18 C 1.53776 * 87.17336 * 25.38950 * 17 16 15 19 19 H 0.97003 * 119.99383 * 359.97438 * 1 2 3 20 20 H 1.08994 * 110.99300 * 37.80699 * 11 9 7 21 21 H 1.09002 * 111.02291 * 274.00348 * 11 9 7 22 22 H 1.08998 * 110.70777 * 205.96534 * 12 11 9 23 23 H 1.09004 * 110.85772 * 82.79208 * 12 11 9 24 24 H 1.08999 * 109.88869 * 262.87518 * 13 12 11 25 25 H 1.09000 * 109.88774 * 141.68675 * 13 12 11 26 26 H 1.09003 * 112.90536 * 301.83882 * 15 14 13 27 27 H 1.08999 * 113.61359 * 105.46710 * 16 15 14 28 28 H 1.08998 * 113.61587 * 334.57071 * 16 15 14 29 29 H 1.08999 * 113.61287 * 139.98306 * 17 16 15 30 30 H 1.08998 * 113.61441 * 270.79993 * 17 16 15 31 31 H 1.09003 * 113.61637 * 89.15319 * 18 17 16 32 32 H 1.08998 * 113.61538 * 220.05775 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2493 1.6177 0.0000 4 1 3.1029 1.6963 -1.2125 5 1 1.2843 2.7464 0.0006 6 1 3.1031 1.6963 1.2124 7 6 2.0045 -1.1941 -0.0005 8 1 3.0845 -1.1941 -0.0010 9 6 1.2509 -2.4992 -0.0017 10 1 0.5876 -2.5561 0.8614 11 6 0.4429 -2.6542 -1.3141 12 6 0.2938 -4.1954 -1.4102 13 6 1.6346 -4.7102 -0.8456 14 7 2.1938 -3.6380 -0.0021 15 6 2.4406 -4.1176 1.3643 16 6 3.2323 -3.1251 2.2320 17 6 3.9886 -4.3406 2.7936 18 6 3.6508 -5.0625 1.4785 19 1 -0.4849 0.8401 0.0004 20 1 1.0004 -2.2621 -2.1646 21 1 -0.5314 -2.1721 -1.2327 22 1 0.1674 -4.5065 -2.4472 23 1 -0.5401 -4.5434 -0.8005 24 1 2.3197 -4.9343 -1.6632 25 1 1.4654 -5.6041 -0.2452 26 1 1.5422 -4.5006 1.8482 27 1 2.6218 -2.6099 2.9736 28 1 3.8619 -2.4471 1.6559 29 1 5.0551 -4.1647 2.9337 30 1 3.5141 -4.7837 3.6692 31 1 4.3950 -4.9152 0.6959 32 1 3.3776 -6.1091 1.6126 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260412081.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:03:33 Heat of formation + Delta-G solvation = 17.524835 kcal Electronic energy + Delta-G solvation = -12880.991085 eV Core-core repulsion = 10841.713102 eV Total energy + Delta-G solvation = -2039.277983 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 195.132 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -38.82232 -36.19758 -32.50280 -29.64233 -28.23046 -24.87174 -24.38048 -23.44020 -19.91625 -19.58240 -18.62275 -16.33186 -15.49964 -14.89372 -14.39507 -14.07254 -13.20060 -12.55587 -12.31183 -11.76278 -11.69302 -11.53287 -11.35836 -10.92039 -10.65960 -10.57830 -10.29268 -10.05997 -9.82293 -9.65071 -9.58350 -9.30854 -8.90505 -8.33188 -7.15659 -5.94296 -3.93893 3.37327 3.41266 3.44561 4.47639 5.07820 5.21848 5.30062 5.36845 5.53962 5.58729 5.71043 5.85563 6.07697 6.11355 6.16717 6.29223 6.37747 6.48529 6.60571 6.65634 6.72931 6.89994 7.03004 7.12306 7.20475 7.50526 7.64349 7.94824 8.21684 8.38991 8.62852 9.11475 9.69060 11.15306 Molecular weight = 195.13amu Principal moments of inertia in cm(-1) A = 0.032006 B = 0.014455 C = 0.010753 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 874.632556 B = 1936.622626 C = 2603.347056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.898 5.898 2 C 0.056 3.944 3 Si 0.894 3.106 4 H -0.278 1.278 5 H -0.290 1.290 6 H -0.278 1.278 7 C -0.486 4.486 8 H 0.062 0.938 9 C 0.211 3.789 10 H 0.011 0.989 11 C -0.104 4.104 12 C -0.152 4.152 13 C 0.047 3.953 14 N -0.517 5.517 15 C 0.061 3.939 16 C -0.111 4.111 17 C -0.149 4.149 18 C -0.129 4.129 19 H 0.259 0.741 20 H 0.056 0.944 21 H 0.071 0.929 22 H 0.054 0.946 23 H 0.050 0.950 24 H 0.060 0.940 25 H 0.035 0.965 26 H 0.047 0.953 27 H 0.058 0.942 28 H 0.094 0.906 29 H 0.061 0.939 30 H 0.069 0.931 31 H 0.084 0.916 32 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.507 -7.478 1.721 8.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.538 5.538 2 C -0.145 4.145 3 Si 0.722 3.278 4 H -0.203 1.203 5 H -0.216 1.216 6 H -0.204 1.204 7 C -0.524 4.524 8 H 0.080 0.920 9 C 0.105 3.895 10 H 0.029 0.971 11 C -0.143 4.143 12 C -0.190 4.190 13 C -0.081 4.081 14 N -0.241 5.241 15 C -0.048 4.048 16 C -0.149 4.149 17 C -0.187 4.187 18 C -0.167 4.167 19 H 0.069 0.931 20 H 0.074 0.926 21 H 0.089 0.911 22 H 0.073 0.927 23 H 0.069 0.931 24 H 0.078 0.922 25 H 0.053 0.947 26 H 0.064 0.936 27 H 0.077 0.923 28 H 0.112 0.888 29 H 0.080 0.920 30 H 0.088 0.912 31 H 0.103 0.897 32 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 3.827 -7.188 1.527 8.285 hybrid contribution -0.493 0.615 0.317 0.850 sum 3.334 -6.573 1.845 7.598 Atomic orbital electron populations 1.69956 1.05864 1.26474 1.51479 1.24952 0.94848 0.98981 0.95682 0.86628 0.79465 0.83121 0.78573 1.20339 1.21564 1.20375 1.21001 0.93248 0.89147 1.49047 0.91975 1.20070 0.88542 0.87981 0.92908 0.97098 1.22636 1.01207 0.90552 0.99946 1.22892 0.96846 0.99835 0.99438 1.22637 0.94757 0.93829 0.96887 1.63857 1.46525 1.06060 1.07700 1.23079 0.95003 0.96033 0.90732 1.22798 0.98445 0.95714 0.97921 1.22795 1.00055 0.98950 0.96862 1.22989 0.98999 0.97088 0.97616 0.93144 0.92563 0.91069 0.92749 0.93094 0.92184 0.94689 0.93565 0.92286 0.88765 0.91974 0.91205 0.89732 0.92974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -25.91 12.27 55.43 0.68 -25.23 16 2 C 0.06 1.56 5.34 -17.82 -0.10 1.46 16 3 Si 0.89 21.60 29.54 -169.99 -5.02 16.58 16 4 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 5 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 6 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 7 C -0.49 -13.37 7.92 -34.44 -0.27 -13.64 16 8 H 0.06 1.73 7.22 -52.49 -0.38 1.35 16 9 C 0.21 5.36 2.13 -67.34 -0.14 5.22 16 10 H 0.01 0.32 7.81 -51.93 -0.41 -0.09 16 11 C -0.10 -2.51 5.86 -24.60 -0.14 -2.65 16 12 C -0.15 -2.98 6.94 -24.90 -0.17 -3.15 16 13 C 0.05 0.91 6.66 -2.83 -0.02 0.89 16 14 N -0.52 -11.39 4.76 -215.76 -1.03 -12.41 16 15 C 0.06 1.19 2.63 -66.81 -0.18 1.02 16 16 C -0.11 -2.12 6.89 -25.92 -0.18 -2.29 16 17 C -0.15 -2.26 8.08 -25.92 -0.21 -2.47 16 18 C -0.13 -2.08 7.58 -25.83 -0.20 -2.27 16 19 H 0.26 7.18 8.31 -40.82 -0.34 6.84 16 20 H 0.06 1.40 8.05 -51.93 -0.42 0.98 16 21 H 0.07 1.82 7.57 -51.93 -0.39 1.43 16 22 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 23 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 24 H 0.06 1.11 8.14 -51.93 -0.42 0.68 16 25 H 0.03 0.62 7.55 -51.93 -0.39 0.22 16 26 H 0.05 0.92 8.14 -51.93 -0.42 0.50 16 27 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 28 H 0.09 1.96 7.33 -51.93 -0.38 1.58 16 29 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 30 H 0.07 0.96 8.14 -51.93 -0.42 0.54 16 31 H 0.08 1.40 8.14 -51.93 -0.42 0.97 16 32 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 LS Contribution 255.03 15.07 3.84 3.84 Total: -1.00 -28.17 255.03 -8.44 -36.61 By element: Atomic # 1 Polarization: 3.81 SS G_CDS: -5.31 Total: -1.50 kcal Atomic # 6 Polarization: -16.28 SS G_CDS: -1.61 Total: -17.89 kcal Atomic # 7 Polarization: -37.30 SS G_CDS: -0.35 Total: -37.65 kcal Atomic # 14 Polarization: 21.60 SS G_CDS: -5.02 Total: 16.58 kcal Total LS contribution 3.84 Total: 3.84 kcal Total: -28.17 -8.44 -36.61 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260412081.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.135 kcal (2) G-P(sol) polarization free energy of solvation -28.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.610 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds