Wall clock time and date at job start Mon Mar 30 2020 01:51:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37690 * 119.47308 * 2 1 4 4 C 1.41048 * 118.88306 * 179.70891 * 3 2 1 5 5 C 1.41434 * 121.04370 * 180.29355 * 4 3 2 6 6 H 1.07993 * 119.99560 * 204.57374 * 5 4 3 7 7 C 1.40046 * 119.99926 * 24.56729 * 5 4 3 8 8 N 1.30748 * 120.00304 * 13.75215 * 7 5 4 9 9 Si 1.86804 * 120.00019 * 193.75342 * 7 5 4 10 10 H 1.48494 * 109.46985 * 59.99990 * 9 7 5 11 11 H 1.48497 * 109.46993 * 180.02562 * 9 7 5 12 12 H 1.48496 * 109.46720 * 299.99983 * 9 7 5 13 13 C 1.41209 * 117.91647 * 0.50490 * 4 3 2 14 14 Cl 1.73600 * 120.58861 * 179.79191 * 13 4 3 15 15 C 1.37894 * 118.82192 * 359.51144 * 13 4 3 16 16 N 1.31997 * 120.98081 * 0.23696 * 15 13 4 17 17 H 1.09001 * 109.47233 * 270.01914 * 1 2 3 18 18 H 1.08994 * 109.47485 * 30.02426 * 1 2 3 19 19 H 1.09000 * 109.47003 * 150.02378 * 1 2 3 20 20 H 1.08005 * 120.56037 * 359.95142 * 3 2 1 21 21 H 0.96998 * 120.00154 * 184.98006 * 8 7 5 22 22 H 1.08003 * 119.51210 * 180.24777 * 15 13 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1844 1.1987 0.0000 4 6 3.5948 1.1842 0.0063 5 6 4.3366 2.3884 0.0128 6 1 5.3457 2.4030 -0.3717 7 6 3.7624 3.5618 0.5175 8 7 2.6621 3.5010 1.2213 9 14 4.5684 5.2139 0.1853 10 1 4.6329 5.4475 -1.2797 11 1 3.7707 6.2912 0.8243 12 1 5.9427 5.2161 0.7479 13 6 4.2431 -0.0703 0.0013 14 17 5.9762 -0.1690 0.0031 15 6 3.4750 -1.2155 0.0009 16 7 2.1566 -1.1494 0.0004 17 1 -0.3634 0.0003 1.0277 18 1 -0.3634 0.8897 -0.5142 19 1 -0.3633 -0.8902 -0.5135 20 1 1.6449 2.1344 -0.0008 21 1 2.2251 4.3175 1.5096 22 1 3.9592 -2.1809 0.0012 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238469605.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:30 Heat of formation + Delta-G solvation = 0.057403 kcal Electronic energy + Delta-G solvation = -10137.300594 eV Core-core repulsion = 8103.163569 eV Total energy + Delta-G solvation = -2034.137025 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 197.030 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -38.49679 -35.21555 -34.27117 -31.43035 -30.57040 -26.30584 -25.91647 -21.93044 -20.45020 -17.37195 -15.77523 -14.91864 -14.57676 -14.15208 -13.32970 -12.81028 -12.19566 -11.96187 -11.70796 -11.43548 -11.30168 -11.13286 -10.50614 -10.45959 -10.07846 -9.81169 -9.48655 -8.12630 -8.06785 -7.43850 -6.94340 -4.71712 2.49766 2.69500 2.97474 3.00661 3.15138 3.61068 3.79383 4.49709 5.39317 5.54913 6.02438 6.17754 6.37411 6.48828 6.71945 6.78737 6.96819 7.16925 7.31229 7.63358 7.92657 8.28330 8.53673 8.58531 9.44398 9.94816 Molecular weight = 197.03amu Principal moments of inertia in cm(-1) A = 0.030290 B = 0.016539 C = 0.010985 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 924.165523 B = 1692.520546 C = 2548.276856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.105 3.895 3 C -0.201 4.201 4 C 0.132 3.868 5 C -0.437 4.437 6 H 0.090 0.910 7 C 0.076 3.924 8 N -0.782 5.782 9 Si 0.915 3.085 10 H -0.261 1.261 11 H -0.276 1.276 12 H -0.262 1.262 13 C -0.189 4.189 14 Cl -0.112 7.112 15 C 0.122 3.878 16 N -0.564 5.564 17 H 0.061 0.939 18 H 0.060 0.940 19 H 0.059 0.941 20 H 0.135 0.865 21 H 0.286 0.714 22 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.016 0.369 -1.374 1.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.026 4.026 3 C -0.223 4.223 4 C 0.124 3.876 5 C -0.467 4.467 6 H 0.108 0.892 7 C -0.144 4.144 8 N -0.407 5.407 9 Si 0.739 3.261 10 H -0.185 1.185 11 H -0.201 1.201 12 H -0.186 1.186 13 C -0.221 4.221 14 Cl -0.084 7.084 15 C -0.035 4.035 16 N -0.280 5.280 17 H 0.080 0.920 18 H 0.079 0.921 19 H 0.078 0.922 20 H 0.152 0.848 21 H 0.097 0.903 22 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.529 -0.261 -1.177 1.316 hybrid contribution 1.024 1.567 -0.014 1.871 sum 0.495 1.306 -1.191 1.835 Atomic orbital electron populations 1.20473 0.91232 1.01370 1.01421 1.20739 0.95390 0.89269 0.97183 1.22057 0.93885 0.97895 1.08461 1.17681 0.91978 0.91028 0.86921 1.19686 1.01258 0.92057 1.33693 0.89221 1.26018 0.94773 1.01768 0.91823 1.69743 1.16103 1.31381 1.23435 0.86232 0.80233 0.79628 0.80028 1.18549 1.20083 1.18595 1.21905 0.82213 0.96059 1.21930 1.98201 1.13907 1.98493 1.97768 1.21840 0.89354 0.95663 0.96619 1.67326 1.08269 1.28894 1.23509 0.92017 0.92079 0.92199 0.84784 0.90253 0.85429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.65 10.16 36.00 0.37 -1.28 14 2 C 0.10 2.48 6.77 -82.71 -0.56 1.92 14 3 C -0.20 -5.10 8.41 -38.72 -0.33 -5.42 14 4 C 0.13 3.48 5.61 -106.49 -0.60 2.88 14 5 C -0.44 -11.22 8.63 -37.69 -0.33 -11.55 14 6 H 0.09 2.25 7.20 -52.49 -0.38 1.87 14 7 C 0.08 1.83 5.26 -17.34 -0.09 1.74 14 8 N -0.78 -19.17 10.79 55.55 0.60 -18.57 14 9 Si 0.92 17.94 29.59 -169.99 -5.03 12.91 14 10 H -0.26 -5.07 7.11 56.52 0.40 -4.66 14 11 H -0.28 -5.22 7.11 56.52 0.40 -4.82 14 12 H -0.26 -5.13 7.11 56.52 0.40 -4.73 14 13 C -0.19 -4.66 6.40 -38.58 -0.25 -4.91 14 14 Cl -0.11 -2.43 27.77 -51.86 -1.44 -3.87 14 15 C 0.12 2.87 10.97 -17.61 -0.19 2.68 14 16 N -0.56 -13.65 10.24 -9.61 -0.10 -13.75 14 17 H 0.06 1.09 8.14 -51.93 -0.42 0.67 14 18 H 0.06 1.05 8.07 -51.93 -0.42 0.63 14 19 H 0.06 1.04 8.14 -51.93 -0.42 0.62 14 20 H 0.13 3.41 6.14 -52.48 -0.32 3.09 14 21 H 0.29 6.34 8.30 -40.82 -0.34 6.00 14 22 H 0.13 2.64 8.06 -52.48 -0.42 2.22 14 LS Contribution 215.96 15.07 3.25 3.25 Total: -1.00 -26.87 215.96 -6.21 -33.08 By element: Atomic # 1 Polarization: 2.41 SS G_CDS: -1.52 Total: 0.89 kcal Atomic # 6 Polarization: -11.96 SS G_CDS: -1.97 Total: -13.93 kcal Atomic # 7 Polarization: -32.83 SS G_CDS: 0.50 Total: -32.32 kcal Atomic # 14 Polarization: 17.94 SS G_CDS: -5.03 Total: 12.91 kcal Atomic # 17 Polarization: -2.43 SS G_CDS: -1.44 Total: -3.87 kcal Total LS contribution 3.25 Total: 3.25 kcal Total: -26.87 -6.21 -33.08 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238469605.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.138 kcal (2) G-P(sol) polarization free energy of solvation -26.872 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.266 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.081 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds