Wall clock time and date at job start Mon Mar 30 2020 01:51:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.31989 * 119.51191 * 2 1 4 4 C 1.32035 * 122.34616 * 179.97438 * 3 2 1 5 5 C 1.37687 * 121.05189 * 0.02562 * 4 3 2 6 6 C 1.41046 * 118.88102 * 359.96140 * 5 4 3 7 7 C 1.41434 * 121.03828 * 180.02562 * 6 5 4 8 8 H 1.07996 * 119.99817 * 204.20320 * 7 6 5 9 9 C 1.40053 * 120.00032 * 24.20474 * 7 6 5 10 10 N 1.30736 * 120.00312 * 14.10533 * 9 7 6 11 11 Si 1.86804 * 119.99990 * 194.10434 * 9 7 6 12 12 H 1.48498 * 109.46856 * 0.02562 * 11 9 7 13 13 H 1.48504 * 109.46959 * 120.00000 * 11 9 7 14 14 H 1.48495 * 109.47133 * 240.00153 * 11 9 7 15 15 C 1.37905 * 119.50803 * 179.97438 * 2 1 3 16 16 Cl 1.73597 * 120.58898 * 359.74426 * 15 2 1 17 17 H 1.08991 * 109.47404 * 270.02244 * 1 2 3 18 18 H 1.08995 * 109.47081 * 30.02522 * 1 2 3 19 19 H 1.09004 * 109.46988 * 150.01968 * 1 2 3 20 20 H 1.08004 * 119.47564 * 180.02562 * 4 3 2 21 21 H 1.08006 * 120.55791 * 179.97438 * 5 4 3 22 22 H 0.96996 * 120.00235 * 179.97438 * 10 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1572 1.1486 0.0000 4 6 3.4759 1.2139 0.0005 5 6 4.2436 0.0709 0.0005 6 6 3.5981 -1.1832 0.0008 7 6 4.3419 -2.3862 0.0014 8 1 3.9004 -3.2942 -0.3818 9 6 5.6510 -2.3998 0.4990 10 7 6.0916 -1.3934 1.2076 11 14 6.7677 -3.8562 0.1501 12 1 6.0358 -4.8562 -0.6681 13 1 7.9679 -3.3931 -0.5918 14 1 7.1872 -4.4766 1.4324 15 6 2.1862 -1.2002 0.0005 16 17 1.3208 -2.7050 0.0079 17 1 -0.3634 0.0004 1.0276 18 1 -0.3633 0.8897 -0.5142 19 1 -0.3633 -0.8902 -0.5136 20 1 3.9602 2.1793 0.0009 21 1 5.3218 0.1336 0.0005 22 1 6.9981 -1.4030 1.5525 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238489280.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:24 Heat of formation + Delta-G solvation = 1.471557 kcal Electronic energy + Delta-G solvation = -10166.307717 eV Core-core repulsion = 8132.232014 eV Total energy + Delta-G solvation = -2034.075703 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 197.030 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -38.48995 -35.16943 -34.36493 -31.36341 -30.55260 -26.49804 -25.83617 -21.56257 -20.76335 -17.31372 -15.71606 -15.05966 -14.56032 -14.14573 -13.47154 -12.68611 -12.31449 -11.85769 -11.65162 -11.40793 -11.22981 -11.13909 -10.68715 -10.45353 -10.07205 -9.66563 -9.51010 -8.11469 -8.02344 -7.45723 -6.94969 -4.71786 2.52017 2.66057 2.97775 3.04227 3.12775 3.62181 3.78671 4.50673 5.40950 5.53190 5.97332 6.25420 6.33337 6.48928 6.73841 6.83884 6.98389 7.10389 7.33365 7.66660 7.92604 8.29996 8.54150 8.58754 9.45978 9.94149 Molecular weight = 197.03amu Principal moments of inertia in cm(-1) A = 0.043387 B = 0.014284 C = 0.011034 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 645.200971 B = 1959.831798 C = 2537.006826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.141 3.859 3 N -0.565 5.565 4 C 0.085 3.915 5 C -0.209 4.209 6 C 0.132 3.868 7 C -0.436 4.436 8 H 0.091 0.909 9 C 0.075 3.925 10 N -0.781 5.781 11 Si 0.916 3.084 12 H -0.257 1.257 13 H -0.270 1.270 14 H -0.271 1.271 15 C -0.183 4.183 16 Cl -0.109 7.109 17 H 0.063 0.937 18 H 0.062 0.938 19 H 0.066 0.934 20 H 0.126 0.874 21 H 0.134 0.866 22 H 0.285 0.715 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.638 -1.446 -1.318 2.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.004 3.996 3 N -0.281 5.281 4 C -0.065 4.065 5 C -0.232 4.232 6 C 0.123 3.877 7 C -0.467 4.467 8 H 0.109 0.891 9 C -0.145 4.145 10 N -0.406 5.406 11 Si 0.740 3.260 12 H -0.180 1.180 13 H -0.195 1.195 14 H -0.197 1.197 15 C -0.215 4.215 16 Cl -0.081 7.081 17 H 0.082 0.918 18 H 0.081 0.919 19 H 0.085 0.915 20 H 0.143 0.857 21 H 0.152 0.848 22 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.969 -0.690 -1.182 2.398 hybrid contribution 1.146 -1.488 0.022 1.878 sum -0.823 -2.177 -1.161 2.601 Atomic orbital electron populations 1.20582 0.91038 1.01970 1.01726 1.20428 0.95382 0.87480 0.96287 1.67331 1.10325 1.26849 1.23613 1.22071 0.89493 0.97493 0.97455 1.22243 1.01214 0.91415 1.08305 1.17685 0.88802 0.94220 0.86954 1.19754 0.96663 0.96086 1.34174 0.89096 1.26042 0.98463 0.97688 0.92291 1.69755 1.17827 1.30291 1.22693 0.86117 0.79561 0.81001 0.79367 1.18021 1.19451 1.19652 1.21673 0.92741 0.84745 1.22362 1.98188 1.76831 1.35391 1.97683 0.91821 0.91869 0.91480 0.85685 0.84793 0.90383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.81 9.77 36.01 0.35 -1.46 14 2 C 0.14 3.33 6.78 -82.65 -0.56 2.77 14 3 N -0.56 -13.74 10.24 -9.61 -0.10 -13.84 14 4 C 0.08 2.02 11.16 -17.67 -0.20 1.82 14 5 C -0.21 -5.32 8.79 -38.72 -0.34 -5.66 14 6 C 0.13 3.47 5.61 -106.49 -0.60 2.88 14 7 C -0.44 -11.23 8.63 -37.69 -0.33 -11.56 14 8 H 0.09 2.29 7.20 -52.49 -0.38 1.92 14 9 C 0.08 1.81 5.25 -17.34 -0.09 1.72 14 10 N -0.78 -19.19 10.79 55.55 0.60 -18.59 14 11 Si 0.92 17.94 29.58 -169.99 -5.03 12.92 14 12 H -0.26 -5.03 7.11 56.52 0.40 -4.63 14 13 H -0.27 -5.15 7.11 56.52 0.40 -4.75 14 14 H -0.27 -5.24 7.11 56.52 0.40 -4.84 14 15 C -0.18 -4.54 6.39 -38.58 -0.25 -4.79 14 16 Cl -0.11 -2.37 26.10 -51.86 -1.35 -3.72 14 17 H 0.06 1.12 8.14 -51.93 -0.42 0.70 14 18 H 0.06 1.10 8.14 -51.93 -0.42 0.68 14 19 H 0.07 1.19 6.89 -51.93 -0.36 0.83 14 20 H 0.13 2.58 8.06 -52.48 -0.42 2.16 14 21 H 0.13 3.42 6.12 -52.48 -0.32 3.10 14 22 H 0.29 6.29 8.29 -40.82 -0.34 5.95 14 LS Contribution 213.27 15.07 3.21 3.21 Total: -1.00 -27.03 213.27 -6.13 -33.16 By element: Atomic # 1 Polarization: 2.58 SS G_CDS: -1.46 Total: 1.12 kcal Atomic # 6 Polarization: -12.26 SS G_CDS: -2.01 Total: -14.27 kcal Atomic # 7 Polarization: -32.93 SS G_CDS: 0.50 Total: -32.43 kcal Atomic # 14 Polarization: 17.94 SS G_CDS: -5.03 Total: 12.92 kcal Atomic # 17 Polarization: -2.37 SS G_CDS: -1.35 Total: -3.72 kcal Total LS contribution 3.21 Total: 3.21 kcal Total: -27.03 -6.13 -33.16 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238489280.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.633 kcal (2) G-P(sol) polarization free energy of solvation -27.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.162 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds