Wall clock time and date at job start Mon Mar 30 2020 01:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.31498 * 119.78986 * 2 1 4 4 C 1.32100 * 122.01994 * 180.02562 * 3 2 1 5 5 C 1.38510 * 121.34505 * 359.74105 * 4 3 2 6 6 C 1.38214 * 119.40704 * 0.48668 * 5 4 3 7 7 Cl 1.73598 * 120.91896 * 179.80082 * 6 5 4 8 8 C 1.40693 * 119.79584 * 179.97438 * 2 1 3 9 9 C 1.41352 * 120.67274 * 0.02562 * 8 2 1 10 10 H 1.08000 * 120.00399 * 316.59572 * 9 8 2 11 11 C 1.39958 * 119.99959 * 136.60125 * 9 8 2 12 12 N 1.30827 * 119.99520 * 338.43357 * 11 9 8 13 13 Si 1.86798 * 120.00148 * 158.43307 * 11 9 8 14 14 H 1.48500 * 109.47007 * 90.00106 * 13 11 9 15 15 H 1.48499 * 109.46985 * 210.00041 * 13 11 9 16 16 H 1.48499 * 109.46873 * 330.00196 * 13 11 9 17 17 H 1.08995 * 109.46774 * 270.02254 * 1 2 3 18 18 H 1.08998 * 109.47177 * 30.02281 * 1 2 3 19 19 H 1.09003 * 109.46882 * 150.02247 * 1 2 3 20 20 H 1.08003 * 119.32539 * 179.97438 * 4 3 2 21 21 H 1.07999 * 120.29948 * 180.28815 * 5 4 3 22 22 H 0.96999 * 119.99803 * 185.28037 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1603 1.1412 0.0000 4 6 3.4803 1.1926 -0.0005 5 6 4.2463 0.0386 0.0043 6 6 3.6185 -1.1927 -0.0005 7 17 4.5401 -2.6639 0.0000 8 6 2.2061 -1.2209 0.0005 9 6 1.5094 -2.4508 0.0006 10 1 0.6517 -2.5857 0.6429 11 6 1.9311 -3.4940 -0.8318 12 7 2.6623 -3.2352 -1.8854 13 14 1.4499 -5.2555 -0.4385 14 1 0.1619 -5.5772 -1.1041 15 1 2.5048 -6.1782 -0.9295 16 1 1.3004 -5.4115 1.0307 17 1 -0.3633 0.0004 1.0276 18 1 -0.3633 0.8898 -0.5142 19 1 -0.3633 -0.8902 -0.5135 20 1 3.9722 2.1541 -0.0009 21 1 5.3245 0.1003 0.0085 22 1 2.8904 -3.9467 -2.5040 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238490231.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:34 Heat of formation + Delta-G solvation = 7.919663 kcal Electronic energy + Delta-G solvation = -10354.247199 eV Core-core repulsion = 8320.451107 eV Total energy + Delta-G solvation = -2033.796092 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 197.030 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -38.52936 -35.13319 -33.85290 -31.54151 -30.52162 -26.95278 -25.17308 -21.66769 -20.49834 -17.38986 -15.71582 -15.08001 -14.85638 -13.74833 -13.23623 -12.59579 -12.26236 -11.76138 -11.71298 -11.33279 -11.23827 -11.10632 -10.65806 -10.52696 -10.18308 -9.62756 -8.91085 -8.18919 -7.85417 -7.39541 -6.82161 -4.53209 2.49317 2.68437 3.06632 3.08038 3.14127 3.68813 3.92603 4.59286 5.31167 5.68365 6.05627 6.36310 6.43207 6.59803 6.72069 6.76678 7.09076 7.17218 7.32669 7.47879 7.78925 8.24868 8.54598 8.70770 9.46274 10.14763 Molecular weight = 197.03amu Principal moments of inertia in cm(-1) A = 0.039036 B = 0.018076 C = 0.013306 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 717.108612 B = 1548.616773 C = 2103.878701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C 0.039 3.961 3 N -0.473 5.473 4 C -0.020 4.020 5 C -0.144 4.144 6 C -0.054 4.054 7 Cl -0.088 7.088 8 C 0.080 3.920 9 C -0.465 4.465 10 H 0.088 0.912 11 C 0.090 3.910 12 N -0.771 5.771 13 Si 0.899 3.101 14 H -0.270 1.270 15 H -0.276 1.276 16 H -0.258 1.258 17 H 0.051 0.949 18 H 0.051 0.949 19 H 0.073 0.927 20 H 0.129 0.871 21 H 0.108 0.892 22 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.251 -0.756 1.669 1.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.105 4.105 3 N -0.182 5.182 4 C -0.176 4.176 5 C -0.165 4.165 6 C -0.088 4.088 7 Cl -0.059 7.059 8 C 0.075 3.925 9 C -0.494 4.494 10 H 0.106 0.894 11 C -0.131 4.131 12 N -0.394 5.394 13 Si 0.724 3.276 14 H -0.195 1.195 15 H -0.201 1.201 16 H -0.182 1.182 17 H 0.069 0.931 18 H 0.070 0.930 19 H 0.092 0.908 20 H 0.146 0.854 21 H 0.126 0.874 22 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 0.077 -0.214 1.487 1.504 hybrid contribution 0.659 -1.780 -0.036 1.898 sum 0.736 -1.994 1.451 2.573 Atomic orbital electron populations 1.20291 0.90415 1.01696 1.00593 1.21288 0.95654 0.87453 1.06070 1.66823 1.09834 1.30462 1.11101 1.21657 0.89273 0.96063 1.10564 1.21503 0.99410 0.92456 1.03130 1.21251 0.92097 0.85232 1.10220 1.98217 1.73173 1.37825 1.96697 1.18108 0.89865 0.94194 0.90377 1.19248 1.13132 0.95190 1.21825 0.89370 1.25697 0.92685 1.00763 0.93995 1.69782 1.26306 1.35618 1.07739 0.86416 0.78878 0.81853 0.80498 1.19503 1.20074 1.18223 0.93066 0.93008 0.90823 0.85372 0.87355 0.90590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.50 9.70 36.01 0.35 -1.15 14 2 C 0.04 0.96 6.85 -81.81 -0.56 0.40 14 3 N -0.47 -11.52 10.25 -8.82 -0.09 -11.61 14 4 C -0.02 -0.46 11.17 -17.34 -0.19 -0.66 14 5 C -0.14 -3.31 9.91 -39.49 -0.39 -3.70 14 6 C -0.05 -1.36 5.99 -38.44 -0.23 -1.59 14 7 Cl -0.09 -2.07 25.10 -51.86 -1.30 -3.37 14 8 C 0.08 2.07 5.29 -106.64 -0.56 1.51 14 9 C -0.46 -11.76 7.35 -37.75 -0.28 -12.04 14 10 H 0.09 2.13 7.72 -52.49 -0.41 1.72 14 11 C 0.09 2.20 3.81 -17.34 -0.07 2.13 14 12 N -0.77 -19.59 11.15 55.55 0.62 -18.97 14 13 Si 0.90 18.59 29.61 -169.99 -5.03 13.55 14 14 H -0.27 -5.41 7.11 56.52 0.40 -5.01 14 15 H -0.28 -5.67 7.11 56.52 0.40 -5.27 14 16 H -0.26 -5.32 7.11 56.52 0.40 -4.92 14 17 H 0.05 0.97 8.14 -51.93 -0.42 0.54 14 18 H 0.05 0.99 8.14 -51.93 -0.42 0.57 14 19 H 0.07 1.52 7.07 -51.93 -0.37 1.15 14 20 H 0.13 2.47 8.06 -52.48 -0.42 2.05 14 21 H 0.11 2.19 8.06 -52.49 -0.42 1.76 14 22 H 0.28 6.65 8.30 -40.82 -0.34 6.31 14 LS Contribution 212.99 15.07 3.21 3.21 Total: -1.00 -27.24 212.99 -6.13 -33.37 By element: Atomic # 1 Polarization: 0.52 SS G_CDS: -1.60 Total: -1.08 kcal Atomic # 6 Polarization: -13.16 SS G_CDS: -1.93 Total: -15.09 kcal Atomic # 7 Polarization: -31.11 SS G_CDS: 0.53 Total: -30.58 kcal Atomic # 14 Polarization: 18.59 SS G_CDS: -5.03 Total: 13.55 kcal Atomic # 17 Polarization: -2.07 SS G_CDS: -1.30 Total: -3.37 kcal Total LS contribution 3.21 Total: 3.21 kcal Total: -27.24 -6.13 -33.37 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238490231.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.288 kcal (2) G-P(sol) polarization free energy of solvation -27.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.129 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.368 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds