Wall clock time and date at job start Mon Mar 30 2020 01:51:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.31396 * 119.51084 * 2 1 4 4 C 1.33617 * 121.52872 * 180.02562 * 3 2 1 5 5 C 1.41341 * 119.81231 * 180.02562 * 4 3 2 6 6 H 1.08001 * 120.00398 * 180.02562 * 5 4 3 7 7 C 1.40031 * 119.99892 * 359.97438 * 5 4 3 8 8 N 1.30750 * 119.99869 * 0.02562 * 7 5 4 9 9 Si 1.86801 * 120.00056 * 179.97438 * 7 5 4 10 10 H 1.48491 * 109.47358 * 0.02562 * 9 7 5 11 11 H 1.48509 * 109.46942 * 120.00629 * 9 7 5 12 12 H 1.48501 * 109.47036 * 240.00198 * 9 7 5 13 13 C 1.40697 * 120.37948 * 359.97438 * 4 3 2 14 14 C 1.38069 * 119.00030 * 0.04593 * 13 4 3 15 15 C 1.38935 * 119.50359 * 180.02562 * 2 1 3 16 16 Cl 1.73601 * 120.24144 * 359.69719 * 15 2 1 17 17 H 1.09002 * 109.46613 * 269.97793 * 1 2 3 18 18 H 1.08999 * 109.46947 * 29.97348 * 1 2 3 19 19 H 1.08998 * 109.47258 * 149.97834 * 1 2 3 20 20 H 0.97006 * 120.00107 * 179.97438 * 8 7 5 21 21 H 1.07996 * 120.49645 * 180.02562 * 13 4 3 22 22 H 1.08004 * 120.70584 * 180.02562 * 14 13 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1542 1.1435 0.0000 4 6 3.4896 1.1905 -0.0005 5 6 4.1487 2.4409 0.0001 6 1 5.2279 2.4825 -0.0008 7 6 3.4023 3.6257 0.0006 8 7 2.0958 3.5753 0.0011 9 14 4.2733 5.2782 0.0021 10 1 5.7426 5.0634 0.0018 11 1 3.8851 6.0435 -1.2100 12 1 3.8844 6.0417 1.2150 13 6 4.2434 0.0026 -0.0005 14 6 3.5825 -1.2096 -0.0010 15 6 2.1912 -1.2092 -0.0005 16 17 1.3166 -2.7087 0.0067 17 1 -0.3632 -0.0004 1.0277 18 1 -0.3633 0.8902 -0.5134 19 1 -0.3634 -0.8898 -0.5142 20 1 1.5788 4.3961 0.0019 21 1 5.3228 0.0384 -0.0005 22 1 4.1337 -2.1384 -0.0006 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238519067.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:27 Heat of formation + Delta-G solvation = 10.723862 kcal Electronic energy + Delta-G solvation = -10110.365325 eV Core-core repulsion = 8076.690832 eV Total energy + Delta-G solvation = -2033.674493 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 197.030 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -38.37175 -35.37927 -33.74073 -31.69518 -30.22883 -27.26768 -25.14919 -21.56389 -20.52047 -17.56989 -15.49101 -15.12078 -14.64898 -13.89691 -13.33800 -12.62493 -12.12955 -11.63388 -11.52765 -11.34645 -11.08900 -11.03584 -10.74328 -10.64048 -10.23335 -9.81250 -9.35064 -8.26628 -7.73854 -7.52396 -6.55416 -4.66354 2.53188 2.84388 3.02583 3.06497 3.06924 3.47422 3.84858 4.57156 5.66340 5.74373 5.92323 6.28202 6.49901 6.55876 6.65861 6.77422 7.00055 7.21980 7.31345 7.40678 7.79760 8.06943 8.49000 8.74503 9.93144 10.16212 Molecular weight = 197.03amu Principal moments of inertia in cm(-1) A = 0.072404 B = 0.010487 C = 0.009206 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 386.625880 B = 2669.299589 C = 3040.777703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.170 3.830 3 N -0.472 5.472 4 C 0.252 3.748 5 C -0.419 4.419 6 H 0.088 0.912 7 C 0.066 3.934 8 N -0.708 5.708 9 Si 0.911 3.089 10 H -0.259 1.259 11 H -0.272 1.272 12 H -0.272 1.272 13 C -0.270 4.270 14 C -0.046 4.046 15 C -0.226 4.226 16 Cl -0.128 7.128 17 H 0.062 0.938 18 H 0.069 0.931 19 H 0.062 0.938 20 H 0.275 0.725 21 H 0.106 0.894 22 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.328 -2.140 -0.012 2.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.022 3.978 3 N -0.186 5.186 4 C 0.128 3.872 5 C -0.450 4.450 6 H 0.106 0.894 7 C -0.161 4.161 8 N -0.328 5.328 9 Si 0.735 3.265 10 H -0.183 1.183 11 H -0.197 1.197 12 H -0.197 1.197 13 C -0.292 4.292 14 C -0.070 4.070 15 C -0.257 4.257 16 Cl -0.100 7.100 17 H 0.081 0.919 18 H 0.087 0.913 19 H 0.081 0.919 20 H 0.087 0.913 21 H 0.124 0.876 22 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -1.016 -1.311 -0.011 1.659 hybrid contribution 0.852 -0.278 0.024 0.897 sum -0.164 -1.589 0.013 1.598 Atomic orbital electron populations 1.20585 0.91158 1.01944 1.01636 1.21137 0.96125 0.87550 0.93029 1.68764 1.08791 1.22683 1.18341 1.18645 0.87945 0.92397 0.88206 1.19730 0.94549 0.89221 1.41481 0.89409 1.26140 0.94882 1.01469 0.93587 1.70130 1.06044 1.29329 1.27307 0.86212 0.80728 0.80896 0.78705 1.18274 1.19680 1.19681 1.21716 0.99084 0.92528 1.15917 1.20739 0.91955 0.97389 0.96903 1.21224 0.92202 0.84869 1.27419 1.98196 1.77603 1.36026 1.98172 0.91903 0.91251 0.91950 0.91340 0.87558 0.87663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.96 9.77 36.01 0.35 -1.61 14 2 C 0.17 4.15 6.79 -82.52 -0.56 3.59 14 3 N -0.47 -12.88 7.77 -7.33 -0.06 -12.94 14 4 C 0.25 6.80 6.55 -84.98 -0.56 6.25 14 5 C -0.42 -10.90 9.14 -37.73 -0.34 -11.25 14 6 H 0.09 2.12 7.85 -52.49 -0.41 1.70 14 7 C 0.07 1.62 5.50 -17.34 -0.10 1.52 14 8 N -0.71 -18.31 11.46 55.55 0.64 -17.68 14 9 Si 0.91 17.96 29.56 -169.99 -5.02 12.94 14 10 H -0.26 -5.00 7.11 56.52 0.40 -4.60 14 11 H -0.27 -5.28 7.11 56.52 0.40 -4.88 14 12 H -0.27 -5.29 7.11 56.52 0.40 -4.88 14 13 C -0.27 -6.54 9.84 -38.72 -0.38 -6.92 14 14 C -0.05 -1.04 9.96 -39.32 -0.39 -1.43 14 15 C -0.23 -5.20 6.36 -39.00 -0.25 -5.45 14 16 Cl -0.13 -2.49 27.31 -51.86 -1.42 -3.91 14 17 H 0.06 1.20 8.14 -51.93 -0.42 0.78 14 18 H 0.07 1.42 8.14 -51.93 -0.42 1.00 14 19 H 0.06 1.15 6.89 -51.93 -0.36 0.80 14 20 H 0.28 6.40 8.29 -40.82 -0.34 6.06 14 21 H 0.11 2.34 8.06 -52.49 -0.42 1.91 14 22 H 0.11 2.09 8.06 -52.48 -0.42 1.67 14 LS Contribution 216.75 15.07 3.27 3.27 Total: -1.00 -27.63 216.75 -6.42 -34.04 By element: Atomic # 1 Polarization: 1.15 SS G_CDS: -1.59 Total: -0.44 kcal Atomic # 6 Polarization: -13.06 SS G_CDS: -2.23 Total: -15.29 kcal Atomic # 7 Polarization: -31.19 SS G_CDS: 0.58 Total: -30.61 kcal Atomic # 14 Polarization: 17.96 SS G_CDS: -5.02 Total: 12.94 kcal Atomic # 17 Polarization: -2.49 SS G_CDS: -1.42 Total: -3.91 kcal Total LS contribution 3.27 Total: 3.27 kcal Total: -27.63 -6.42 -34.04 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238519067.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.767 kcal (2) G-P(sol) polarization free energy of solvation -27.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.043 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds