Wall clock time and date at job start Mon Mar 30 2020 02:01:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34850 * 116.99640 * 2 1 4 4 O 1.21573 * 120.00013 * 0.02562 * 3 2 1 5 5 C 1.46801 * 119.99604 * 179.97438 * 3 2 1 6 6 C 1.38245 * 127.33845 * 179.97438 * 5 3 2 7 7 N 1.33369 * 106.18885 * 180.02562 * 6 5 3 8 8 N 1.28444 * 109.65439 * 359.97438 * 7 6 5 9 9 N 1.28694 * 110.97697 * 0.02562 * 8 7 6 10 10 C 1.37102 * 126.07356 * 179.73872 * 9 8 7 11 11 H 1.08001 * 120.00282 * 180.02562 * 10 9 8 12 12 C 1.39273 * 119.99675 * 0.02562 * 10 9 8 13 13 N 1.31090 * 120.00074 * 0.02562 * 12 10 9 14 14 Si 1.86804 * 119.99877 * 180.02562 * 12 10 9 15 15 H 1.48502 * 109.47162 * 90.00023 * 14 12 10 16 16 H 1.48492 * 109.47040 * 210.00333 * 14 12 10 17 17 H 1.48505 * 109.46839 * 330.00035 * 14 12 10 18 18 H 1.08999 * 109.47447 * 59.99512 * 1 2 3 19 19 H 1.09002 * 109.47463 * 180.02562 * 1 2 3 20 20 H 1.09013 * 109.47333 * 299.99798 * 1 2 3 21 21 H 1.07997 * 126.90237 * 0.02562 * 6 5 3 22 22 H 0.97003 * 120.00091 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0641 1.2016 0.0000 4 8 1.4019 2.2211 0.0005 5 6 3.5301 1.2784 0.0006 6 6 4.3100 2.4199 0.0002 7 7 5.5773 2.0044 0.0004 8 7 5.6110 0.7204 0.0014 9 7 4.4219 0.2283 0.0014 10 6 4.0997 -1.1043 -0.0027 11 1 3.0637 -1.4094 -0.0027 12 6 5.1084 -2.0645 -0.0068 13 7 6.3659 -1.6942 -0.0063 14 14 4.6695 -3.8802 -0.0131 15 1 4.5523 -4.3563 -1.4148 16 1 5.7321 -4.6488 0.6835 17 1 3.3750 -4.0789 0.6871 18 1 -0.3634 0.5139 -0.8899 19 1 -0.3634 -1.0277 0.0005 20 1 -0.3634 0.5139 0.8901 21 1 3.9627 3.4425 -0.0003 22 1 7.0685 -2.3630 -0.0095 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261323620.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:01:27 Heat of formation + Delta-G solvation = 3.849848 kcal Electronic energy + Delta-G solvation = -12337.563159 eV Core-core repulsion = 9895.174173 eV Total energy + Delta-G solvation = -2442.388986 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 197.059 amu Computer time = 0.13 seconds Orbital eigenvalues (eV) -41.46440 -39.29671 -35.70956 -34.49993 -31.77343 -29.83066 -27.24813 -26.15337 -22.98581 -21.48177 -20.05527 -18.48240 -16.53465 -16.00627 -15.79890 -15.36269 -14.66675 -14.51977 -13.30064 -13.07594 -12.63061 -12.03673 -11.85351 -11.52952 -11.34528 -10.71746 -10.44023 -10.27433 -10.15625 -9.53712 -9.44033 -8.93977 -7.92663 -7.08793 -4.98971 2.14573 2.85233 2.87289 2.93984 3.36753 3.54919 3.70957 4.11739 4.50222 4.65042 5.46071 5.52017 5.64488 5.86439 6.06759 6.47839 6.65699 6.70642 6.96897 7.50114 7.80772 8.09676 8.52992 8.83525 9.84528 10.27324 Molecular weight = 197.06amu Principal moments of inertia in cm(-1) A = 0.032348 B = 0.016451 C = 0.010970 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 865.378487 B = 1701.618549 C = 2551.850129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.353 6.353 3 C 0.559 3.441 4 O -0.537 6.537 5 C -0.209 4.209 6 C 0.006 3.994 7 N -0.347 5.347 8 N -0.107 5.107 9 N -0.044 5.044 10 C -0.292 4.292 11 H 0.145 0.855 12 C 0.043 3.957 13 N -0.734 5.734 14 Si 0.951 3.049 15 H -0.263 1.263 16 H -0.270 1.270 17 H -0.255 1.255 18 H 0.057 0.943 19 H 0.095 0.905 20 H 0.057 0.943 21 H 0.172 0.828 22 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.302 -4.372 -0.008 8.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.269 6.269 3 C 0.407 3.593 4 O -0.427 6.427 5 C -0.334 4.334 6 C -0.169 4.169 7 N -0.195 5.195 8 N -0.084 5.084 9 N 0.174 4.826 10 C -0.433 4.433 11 H 0.162 0.838 12 C -0.180 4.180 13 N -0.360 5.360 14 Si 0.772 3.228 15 H -0.188 1.188 16 H -0.194 1.194 17 H -0.179 1.179 18 H 0.076 0.924 19 H 0.113 0.887 20 H 0.076 0.924 21 H 0.189 0.811 22 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -5.684 -4.301 0.000 7.128 hybrid contribution -1.535 -0.530 -0.008 1.624 sum -7.219 -4.831 -0.009 8.687 Atomic orbital electron populations 1.23132 0.77735 1.02888 1.01939 1.86705 1.22110 1.33096 1.84992 1.19529 0.86688 0.80980 0.72144 1.90759 1.65866 1.35921 1.50187 1.20712 0.88113 0.89638 1.34920 1.23255 0.89425 0.97430 1.06822 1.74644 1.19057 1.04870 1.20950 1.78772 1.01501 1.01581 1.26508 1.43779 1.03763 1.06491 1.28604 1.20949 0.96958 0.76522 1.48867 0.83757 1.26053 0.94362 1.03022 0.94594 1.70107 0.99873 1.37026 1.28981 0.85538 0.79729 0.77773 0.79726 1.18781 1.19446 1.17857 0.92422 0.88669 0.92435 0.81126 0.89923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.54 10.57 101.05 1.07 1.61 14 2 O -0.35 -7.11 8.15 -40.90 -0.33 -7.44 14 3 C 0.56 12.86 7.93 34.19 0.27 13.13 14 4 O -0.54 -12.52 16.73 -19.32 -0.32 -12.84 14 5 C -0.21 -5.35 6.99 -81.74 -0.57 -5.92 14 6 C 0.01 0.14 11.94 -16.88 -0.20 -0.06 14 7 N -0.35 -9.62 12.33 30.73 0.38 -9.24 14 8 N -0.11 -3.11 10.97 60.35 0.66 -2.45 14 9 N -0.04 -1.21 3.50 -7.98 -0.03 -1.24 14 10 C -0.29 -7.34 9.92 -14.81 -0.15 -7.49 14 11 H 0.15 3.33 5.73 -52.49 -0.30 3.03 14 12 C 0.04 1.01 5.50 -17.48 -0.10 0.91 14 13 N -0.73 -18.69 11.87 55.51 0.66 -18.04 14 14 Si 0.95 17.00 29.55 -169.99 -5.02 11.98 14 15 H -0.26 -4.60 7.11 56.52 0.40 -4.20 14 16 H -0.27 -4.71 7.11 56.52 0.40 -4.31 14 17 H -0.26 -4.36 7.11 56.52 0.40 -3.96 14 18 H 0.06 0.80 8.14 -51.93 -0.42 0.37 14 19 H 0.09 1.05 8.14 -51.93 -0.42 0.63 14 20 H 0.06 0.79 8.14 -51.92 -0.42 0.37 14 21 H 0.17 3.67 8.06 -52.49 -0.42 3.24 14 22 H 0.29 6.53 8.30 -40.82 -0.34 6.20 14 LS Contribution 213.77 15.07 3.22 3.22 Total: -1.00 -30.91 213.77 -1.59 -32.50 By element: Atomic # 1 Polarization: 2.49 SS G_CDS: -1.13 Total: 1.37 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: 0.32 Total: 2.18 kcal Atomic # 7 Polarization: -32.64 SS G_CDS: 1.67 Total: -30.96 kcal Atomic # 8 Polarization: -19.63 SS G_CDS: -0.66 Total: -20.28 kcal Atomic # 14 Polarization: 17.00 SS G_CDS: -5.02 Total: 11.98 kcal Total LS contribution 3.22 Total: 3.22 kcal Total: -30.91 -1.59 -32.50 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261323620.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.352 kcal (2) G-P(sol) polarization free energy of solvation -30.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.503 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.13 seconds