Wall clock time and date at job start Mon Mar 30 2020 02:40:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52994 * 109.47305 * 2 1 4 4 C 1.53000 * 109.46638 * 119.99481 * 2 1 3 5 5 C 1.50705 * 109.47193 * 65.00057 * 4 2 1 6 6 N 1.27646 * 125.76606 * 359.68814 * 5 4 2 7 7 O 1.41378 * 113.17047 * 180.58585 * 6 5 4 8 8 C 1.44256 * 107.50627 * 342.63326 * 7 6 5 9 9 H 1.08991 * 111.01159 * 267.04012 * 8 7 6 10 10 C 1.50704 * 111.00838 * 143.17113 * 8 7 6 11 11 H 1.08002 * 120.00065 * 247.83385 * 10 8 7 12 12 C 1.37878 * 119.99994 * 67.84660 * 10 8 7 13 13 N 1.31511 * 120.00009 * 179.97438 * 12 10 8 14 14 Si 1.86805 * 120.00085 * 359.97438 * 12 10 8 15 15 H 1.48494 * 109.47160 * 90.00410 * 14 12 10 16 16 H 1.48495 * 109.47205 * 210.00492 * 14 12 10 17 17 H 1.48502 * 109.46805 * 330.00546 * 14 12 10 18 18 C 1.51686 * 125.77066 * 180.02562 * 5 4 2 19 19 H 1.09006 * 109.46563 * 60.00681 * 1 2 3 20 20 H 1.08996 * 109.47041 * 180.02562 * 1 2 3 21 21 H 1.08995 * 109.47307 * 300.00580 * 1 2 3 22 22 H 1.09001 * 109.46931 * 239.99233 * 2 1 3 23 23 H 1.09006 * 109.47250 * 179.97438 * 3 2 1 24 24 H 1.09006 * 109.46754 * 299.99202 * 3 2 1 25 25 H 1.08995 * 109.47412 * 59.99484 * 3 2 1 26 26 H 1.09001 * 109.47299 * 305.00158 * 4 2 1 27 27 H 1.08998 * 109.47422 * 184.99995 * 4 2 1 28 28 H 0.97002 * 119.99896 * 179.97438 * 13 12 10 29 29 H 1.09000 * 110.80064 * 313.25810 * 18 5 4 30 30 H 1.08997 * 110.80767 * 76.76289 * 18 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 1.6412 -2.1733 1.1891 6 7 0.9760 -2.7259 0.2503 7 8 0.7389 -4.1019 0.4720 8 6 1.6662 -4.5444 1.4846 9 1 2.5741 -4.9457 1.0345 10 6 1.0256 -5.5572 2.3984 11 1 0.8316 -5.3064 3.4308 12 6 0.6874 -6.8040 1.9165 13 7 0.1289 -7.6879 2.7141 14 14 1.0227 -7.2376 0.1307 15 1 2.3778 -7.8330 0.0119 16 1 0.0093 -8.2157 -0.3398 17 1 0.9475 -6.0087 -0.6996 18 6 1.9563 -3.2235 2.2372 19 1 -0.3633 0.5138 -0.8901 20 1 -0.3633 -1.0276 0.0005 21 1 -0.3633 0.5139 0.8899 22 1 1.8934 -0.5140 -0.8899 23 1 3.1301 1.4424 0.0005 24 1 1.6768 1.9562 -0.8901 25 1 1.6767 1.9563 0.8899 26 1 1.6053 -0.2616 2.1370 27 1 3.1262 -0.6443 1.2954 28 1 -0.1094 -8.5649 2.3750 29 1 3.0032 -3.1702 2.5361 30 1 1.3000 -3.1176 3.1010 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261268483.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:40:30 Heat of formation + Delta-G solvation = 0.851211 kcal Electronic energy + Delta-G solvation = -12595.677445 eV Core-core repulsion = 10392.531866 eV Total energy + Delta-G solvation = -2203.145579 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -39.15612 -36.25701 -32.86037 -31.76920 -29.96361 -27.17487 -26.94421 -25.34519 -21.04504 -20.24902 -18.76139 -17.07255 -15.71835 -15.17837 -14.57327 -14.35602 -13.82606 -13.42214 -12.87177 -12.54871 -12.45069 -12.11228 -11.93519 -11.53790 -11.19164 -11.05646 -10.83846 -10.71263 -10.54771 -10.23746 -9.92910 -9.58550 -9.39538 -8.70242 -8.22493 -6.23135 -4.33831 2.63956 3.30891 3.36038 3.60569 4.18068 4.42035 4.63963 4.99236 5.02541 5.16739 5.37327 5.60576 5.64842 5.70826 5.78025 5.84922 5.91728 5.95067 5.99022 6.09919 6.18190 6.46068 6.48070 6.62066 6.80143 7.07450 7.42682 8.27628 8.47145 8.76301 9.38156 10.86864 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.068310 B = 0.008861 C = 0.008446 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 409.795167 B = 3159.203169 C = 3314.271816 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.092 4.092 3 C -0.146 4.146 4 C -0.043 4.043 5 C 0.054 3.946 6 N -0.310 5.310 7 O -0.205 6.205 8 C 0.140 3.860 9 H 0.042 0.958 10 C -0.525 4.525 11 H 0.082 0.918 12 C 0.087 3.913 13 N -0.883 5.883 14 Si 0.868 3.132 15 H -0.279 1.279 16 H -0.284 1.284 17 H -0.233 1.233 18 C -0.133 4.133 19 H 0.048 0.952 20 H 0.076 0.924 21 H 0.047 0.953 22 H 0.075 0.925 23 H 0.052 0.948 24 H 0.053 0.947 25 H 0.053 0.947 26 H 0.085 0.915 27 H 0.084 0.916 28 H 0.269 0.731 29 H 0.079 0.921 30 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.706 14.214 -3.488 15.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.111 4.111 3 C -0.204 4.204 4 C -0.081 4.081 5 C -0.139 4.139 6 N -0.051 5.051 7 O -0.225 6.225 8 C 0.084 3.916 9 H 0.060 0.940 10 C -0.563 4.563 11 H 0.100 0.900 12 C -0.119 4.119 13 N -0.520 5.520 14 Si 0.693 3.307 15 H -0.205 1.205 16 H -0.210 1.210 17 H -0.156 1.156 18 C -0.172 4.172 19 H 0.067 0.933 20 H 0.095 0.905 21 H 0.066 0.934 22 H 0.093 0.907 23 H 0.072 0.928 24 H 0.073 0.927 25 H 0.073 0.927 26 H 0.104 0.896 27 H 0.102 0.898 28 H 0.078 0.922 29 H 0.097 0.903 30 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 3.982 14.034 -4.523 15.273 hybrid contribution 0.548 -0.711 0.085 0.902 sum 4.530 13.323 -4.438 14.755 Atomic orbital electron populations 1.21944 0.94795 1.03612 1.00639 1.21020 0.96712 0.95294 0.98069 1.21853 1.00682 0.96145 1.01672 1.20269 1.01145 0.87369 0.99352 1.26022 0.97219 0.96967 0.93695 1.77397 1.11424 0.95605 1.20650 1.91469 1.58468 1.12199 1.60397 1.21643 0.90938 0.92556 0.86511 0.94041 1.20871 1.43214 0.95455 0.96777 0.89953 1.25034 0.92858 0.95829 0.98146 1.69891 1.39737 1.06178 1.36189 0.86937 0.77973 0.79997 0.85748 1.20480 1.20983 1.15649 1.22993 1.02675 0.92052 0.99516 0.93284 0.90490 0.93403 0.90705 0.92839 0.92745 0.92740 0.89648 0.89792 0.92157 0.90277 0.89013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.07 8.96 37.16 0.33 -1.74 16 2 C -0.09 -1.16 2.62 -90.62 -0.24 -1.40 16 3 C -0.15 -1.41 9.19 37.15 0.34 -1.07 16 4 C -0.04 -0.57 5.30 -27.88 -0.15 -0.71 16 5 C 0.05 0.99 6.82 -78.57 -0.54 0.46 16 6 N -0.31 -6.77 9.81 35.65 0.35 -6.42 16 7 O -0.20 -5.36 9.99 -11.36 -0.11 -5.47 16 8 C 0.14 3.48 2.95 -26.95 -0.08 3.40 16 9 H 0.04 1.03 7.42 -51.93 -0.39 0.64 16 10 C -0.53 -15.08 9.40 -34.44 -0.32 -15.40 16 11 H 0.08 2.48 7.86 -52.49 -0.41 2.07 16 12 C 0.09 2.56 5.47 -17.82 -0.10 2.46 16 13 N -0.88 -26.99 13.96 55.43 0.77 -26.22 16 14 Si 0.87 22.20 27.08 -169.99 -4.60 17.60 16 15 H -0.28 -6.89 7.11 56.52 0.40 -6.49 16 16 H -0.28 -7.18 7.11 56.52 0.40 -6.78 16 17 H -0.23 -6.05 5.74 56.52 0.32 -5.73 16 18 C -0.13 -2.65 6.61 -26.46 -0.17 -2.83 16 19 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 20 H 0.08 1.30 5.97 -51.93 -0.31 0.99 16 21 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 22 H 0.07 1.05 8.08 -51.93 -0.42 0.63 16 23 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 24 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.09 0.98 8.14 -51.93 -0.42 0.56 16 27 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 28 H 0.27 7.66 8.31 -40.82 -0.34 7.32 16 29 H 0.08 1.35 8.14 -51.93 -0.42 0.92 16 30 H 0.09 1.85 7.77 -51.93 -0.40 1.45 16 LS Contribution 248.64 15.07 3.75 3.75 Total: -1.00 -31.70 248.64 -5.29 -36.99 By element: Atomic # 1 Polarization: 1.12 SS G_CDS: -4.52 Total: -3.40 kcal Atomic # 6 Polarization: -15.90 SS G_CDS: -0.92 Total: -16.82 kcal Atomic # 7 Polarization: -33.76 SS G_CDS: 1.12 Total: -32.64 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -0.11 Total: -5.47 kcal Atomic # 14 Polarization: 22.20 SS G_CDS: -4.60 Total: 17.60 kcal Total LS contribution 3.75 Total: 3.75 kcal Total: -31.70 -5.29 -36.99 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261268483.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.841 kcal (2) G-P(sol) polarization free energy of solvation -31.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.990 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds