Wall clock time and date at job start Mon Mar 30 2020 02:37:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46848 * 111.00228 * 2 1 4 4 C 1.53028 * 109.52474 * 174.15732 * 3 2 1 5 5 C 1.53117 * 109.27995 * 59.18012 * 4 3 2 6 6 C 1.53123 * 109.15747 * 302.33883 * 5 4 3 7 7 H 1.08997 * 109.50861 * 297.67624 * 6 5 4 8 8 C 1.50703 * 109.50201 * 177.59509 * 6 5 4 9 9 O 1.21439 * 120.00090 * 335.08410 * 8 6 5 10 10 C 1.41025 * 119.99961 * 155.08287 * 8 6 5 11 11 H 1.07993 * 119.99864 * 6.40636 * 10 8 6 12 12 C 1.40464 * 120.00045 * 186.40476 * 10 8 6 13 13 N 1.30519 * 119.99918 * 184.88164 * 12 10 8 14 14 Si 1.86801 * 120.00004 * 4.88071 * 12 10 8 15 15 H 1.48499 * 109.47276 * 179.97438 * 14 12 10 16 16 H 1.48507 * 109.47013 * 300.00246 * 14 12 10 17 17 H 1.48504 * 109.46812 * 59.99663 * 14 12 10 18 18 C 1.46851 * 110.99941 * 235.74181 * 2 1 3 19 19 H 1.08997 * 109.46421 * 56.05303 * 1 2 3 20 20 H 1.09006 * 109.46892 * 176.04844 * 1 2 3 21 21 H 1.08990 * 109.47391 * 296.04672 * 1 2 3 22 22 H 1.09004 * 109.46195 * 54.13778 * 3 2 1 23 23 H 1.08998 * 109.45953 * 294.17500 * 3 2 1 24 24 H 1.09001 * 109.50610 * 299.23381 * 4 3 2 25 25 H 1.09005 * 109.53791 * 179.13639 * 4 3 2 26 26 H 1.09002 * 109.52446 * 182.44284 * 5 4 3 27 27 H 1.09002 * 109.57937 * 62.27906 * 5 4 3 28 28 H 0.96999 * 119.99614 * 354.90455 * 13 12 10 29 29 H 1.09002 * 109.42634 * 65.80665 * 18 2 1 30 30 H 1.08996 * 109.49370 * 305.84095 * 18 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3709 0.0000 4 6 3.5181 1.3341 0.1468 5 6 4.1189 0.5369 -1.0142 6 6 3.5183 -0.8716 -1.0206 7 1 3.7820 -1.3839 -0.0954 8 6 4.0600 -1.6442 -2.1956 9 8 4.4604 -1.0535 -3.1782 10 6 4.1019 -3.0532 -2.1541 11 1 3.6524 -3.5827 -1.3271 12 6 4.7282 -3.7680 -3.1885 13 7 4.6845 -5.0724 -3.1997 14 14 5.6236 -2.8517 -4.5479 15 1 6.1948 -3.8280 -5.5100 16 1 4.6699 -1.9593 -5.2547 17 1 6.7184 -2.0391 -3.9592 18 6 1.9953 -0.7718 -1.1331 19 1 -0.3632 0.5739 -0.8525 20 1 -0.3633 -1.0253 -0.0708 21 1 -0.3633 0.4512 0.9232 22 1 1.5634 1.9258 0.8329 23 1 1.7326 1.8608 -0.9376 24 1 3.7813 0.8568 1.0907 25 1 3.9105 2.3510 0.1314 26 1 5.1998 0.4713 -0.8903 27 1 3.8898 1.0349 -1.9564 28 1 4.2843 -5.5507 -2.4567 29 1 1.7319 -0.2723 -2.0655 30 1 1.5640 -1.7727 -1.1231 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259054825.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:37:37 Heat of formation + Delta-G solvation = -69.748212 kcal Electronic energy + Delta-G solvation = -12893.702641 eV Core-core repulsion = 10687.495641 eV Total energy + Delta-G solvation = -2206.207000 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -38.94018 -36.84255 -33.19285 -32.79581 -30.64572 -26.84596 -26.39868 -23.19015 -22.36607 -19.95566 -18.68513 -17.38805 -15.49475 -14.88476 -14.58918 -14.28353 -13.99047 -13.59322 -13.24247 -12.63670 -12.34744 -12.20796 -11.91740 -11.82494 -11.26182 -10.86025 -10.44552 -10.26792 -10.18615 -9.95519 -9.78256 -9.29478 -9.08861 -8.05636 -7.72417 -6.93306 -5.19489 3.37194 3.63764 4.01660 4.03687 4.28836 4.48540 5.14720 5.18771 5.31100 5.41189 5.53184 5.65187 5.73087 5.88207 5.96188 5.98113 6.02884 6.24526 6.26075 6.41228 6.45030 6.63685 6.86089 7.01111 7.36171 7.38526 7.58147 7.87821 8.35580 8.64881 9.90560 10.10159 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.051956 B = 0.010856 C = 0.009729 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 538.788658 B = 2578.645338 C = 2877.252170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.546 5.546 3 C 0.058 3.942 4 C -0.117 4.117 5 C -0.104 4.104 6 C -0.112 4.112 7 H 0.078 0.922 8 C 0.359 3.641 9 O -0.587 6.587 10 C -0.576 4.576 11 H 0.072 0.928 12 C 0.053 3.947 13 N -0.806 5.806 14 Si 1.134 2.866 15 H -0.325 1.325 16 H -0.280 1.280 17 H -0.289 1.289 18 C 0.076 3.924 19 H 0.021 0.979 20 H 0.066 0.934 21 H 0.063 0.937 22 H 0.067 0.933 23 H 0.029 0.971 24 H 0.066 0.934 25 H 0.060 0.940 26 H 0.059 0.941 27 H 0.064 0.936 28 H 0.282 0.718 29 H 0.031 0.969 30 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.037 8.543 5.854 11.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.270 5.270 3 C -0.070 4.070 4 C -0.154 4.154 5 C -0.142 4.142 6 C -0.132 4.132 7 H 0.096 0.904 8 C 0.262 3.738 9 O -0.487 6.487 10 C -0.607 4.607 11 H 0.090 0.910 12 C -0.168 4.168 13 N -0.432 5.432 14 Si 0.967 3.033 15 H -0.257 1.257 16 H -0.208 1.208 17 H -0.216 1.216 18 C -0.051 4.051 19 H 0.040 0.960 20 H 0.085 0.915 21 H 0.082 0.918 22 H 0.085 0.915 23 H 0.048 0.952 24 H 0.085 0.915 25 H 0.079 0.921 26 H 0.078 0.922 27 H 0.083 0.917 28 H 0.093 0.907 29 H 0.050 0.950 30 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -3.980 8.337 4.562 10.303 hybrid contribution -1.375 0.339 1.166 1.835 sum -5.355 8.676 5.728 11.694 Atomic orbital electron populations 1.22322 0.87988 1.01758 1.00127 1.61952 1.06939 1.13556 1.44590 1.22059 0.96050 0.89241 0.99686 1.21618 0.94184 0.99768 0.99864 1.21397 0.99676 0.95370 0.97715 1.21514 0.94112 0.96318 1.01269 0.90365 1.19674 0.78620 0.89785 0.85725 1.89876 1.52749 1.71604 1.34479 1.21962 1.35301 0.94084 1.09339 0.90989 1.27670 0.92936 0.95193 1.00986 1.70562 1.33127 1.08572 1.30971 0.82245 0.76133 0.71413 0.73488 1.25704 1.20755 1.21601 1.21926 0.95174 0.97681 0.90343 0.96038 0.91497 0.91812 0.91481 0.95236 0.91523 0.92087 0.92174 0.91686 0.90717 0.95037 0.90605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.36 9.62 60.07 0.58 0.94 16 2 N -0.55 -9.05 4.91 -242.96 -1.19 -10.24 16 3 C 0.06 0.86 5.46 -3.84 -0.02 0.84 16 4 C -0.12 -1.79 6.09 -26.66 -0.16 -1.95 16 5 C -0.10 -2.01 4.86 -26.61 -0.13 -2.14 16 6 C -0.11 -2.44 2.56 -91.69 -0.23 -2.68 16 7 H 0.08 1.70 8.12 -51.93 -0.42 1.28 16 8 C 0.36 9.52 5.86 -33.25 -0.19 9.33 16 9 O -0.59 -16.77 11.60 5.42 0.06 -16.70 16 10 C -0.58 -16.15 9.65 -37.69 -0.36 -16.52 16 11 H 0.07 2.00 8.06 -52.49 -0.42 1.58 16 12 C 0.05 1.51 5.53 -17.27 -0.10 1.41 16 13 N -0.81 -22.77 13.64 55.57 0.76 -22.01 16 14 Si 1.13 29.66 25.97 -169.99 -4.42 25.25 16 15 H -0.32 -8.15 7.11 56.52 0.40 -7.75 16 16 H -0.28 -7.55 6.77 56.52 0.38 -7.17 16 17 H -0.29 -7.54 7.11 56.52 0.40 -7.14 16 18 C 0.08 1.50 4.73 -3.83 -0.02 1.48 16 19 H 0.02 0.28 8.14 -51.93 -0.42 -0.14 16 20 H 0.07 0.88 8.02 -51.93 -0.42 0.46 16 21 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 22 H 0.07 0.85 8.12 -51.93 -0.42 0.43 16 23 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 24 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 25 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 26 H 0.06 1.17 8.14 -51.93 -0.42 0.75 16 27 H 0.06 1.33 7.79 -51.93 -0.40 0.93 16 28 H 0.28 7.60 8.72 -40.82 -0.36 7.25 16 29 H 0.03 0.65 8.14 -51.93 -0.42 0.22 16 30 H 0.08 1.52 8.04 -51.93 -0.42 1.10 16 LS Contribution 245.32 15.07 3.70 3.70 Total: -1.00 -29.82 245.32 -6.37 -36.19 By element: Atomic # 1 Polarization: -2.26 SS G_CDS: -4.63 Total: -6.89 kcal Atomic # 6 Polarization: -8.65 SS G_CDS: -0.64 Total: -9.29 kcal Atomic # 7 Polarization: -31.82 SS G_CDS: -0.43 Total: -32.25 kcal Atomic # 8 Polarization: -16.77 SS G_CDS: 0.06 Total: -16.70 kcal Atomic # 14 Polarization: 29.66 SS G_CDS: -4.42 Total: 25.25 kcal Total LS contribution 3.70 Total: 3.70 kcal Total: -29.82 -6.37 -36.19 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259054825.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.557 kcal (2) G-P(sol) polarization free energy of solvation -29.825 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds