Wall clock time and date at job start Mon Mar 30 2020 02:37:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.44122 * 111.00161 * 2 1 4 4 C 1.52260 * 104.84196 * 135.04714 * 3 2 1 5 5 C 1.46815 * 114.41326 * 93.17218 * 4 3 2 6 6 C 1.54652 * 106.17272 * 301.63524 * 5 4 3 7 7 O 1.20750 * 120.66714 * 245.85892 * 6 5 4 8 8 C 1.48151 * 118.66561 * 65.87786 * 6 5 4 9 9 H 1.09000 * 108.07176 * 34.44928 * 8 6 5 10 10 C 1.50701 * 108.07178 * 151.00349 * 8 6 5 11 11 H 1.08002 * 119.99761 * 119.99432 * 10 8 6 12 12 C 1.37871 * 119.99694 * 300.27995 * 10 8 6 13 13 N 1.31514 * 120.00482 * 359.71466 * 12 10 8 14 14 Si 1.86801 * 119.99746 * 179.72062 * 12 10 8 15 15 H 1.48504 * 109.47209 * 89.99886 * 14 12 10 16 16 H 1.48501 * 109.47358 * 209.99377 * 14 12 10 17 17 H 1.48496 * 109.47341 * 329.99989 * 14 12 10 18 18 C 1.48788 * 110.99844 * 235.53294 * 2 1 3 19 19 H 1.09003 * 109.47650 * 56.04324 * 1 2 3 20 20 H 1.09000 * 109.47253 * 176.04262 * 1 2 3 21 21 H 1.09004 * 109.47262 * 296.04324 * 1 2 3 22 22 H 1.09006 * 110.35880 * 16.22375 * 3 2 1 23 23 H 1.09000 * 110.49957 * 253.95149 * 3 2 1 24 24 H 1.08998 * 108.49251 * 331.89628 * 4 3 2 25 25 H 1.08997 * 108.36976 * 214.36140 * 4 3 2 26 26 H 1.09002 * 110.10501 * 182.47536 * 5 4 3 27 27 H 1.09004 * 110.11114 * 60.80321 * 5 4 3 28 28 H 0.96995 * 120.00207 * 179.97438 * 13 12 10 29 29 H 1.09003 * 109.19810 * 42.66041 * 18 2 1 30 30 H 1.08996 * 109.20347 * 283.36383 * 18 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9855 1.3455 0.0000 4 6 3.0977 1.3363 1.0399 5 6 4.4345 1.0662 0.4963 6 6 4.3461 -0.3121 -0.1995 7 8 4.9647 -1.2577 0.2263 8 6 3.4877 -0.4490 -1.3992 9 1 3.5310 0.4879 -1.9546 10 6 4.0705 -1.5320 -2.2700 11 1 3.4850 -2.4080 -2.5069 12 6 5.3534 -1.4071 -2.7595 13 7 6.0664 -0.3404 -2.4710 14 14 6.0787 -2.7532 -3.8326 15 1 5.7732 -2.4686 -5.2577 16 1 7.5506 -2.7993 -3.6416 17 1 5.4888 -4.0617 -3.4517 18 6 2.0022 -0.7861 -1.1452 19 1 -0.3634 0.5740 -0.8524 20 1 -0.3634 -1.0252 -0.0709 21 1 -0.3634 0.4512 0.9233 22 1 1.2053 2.0512 0.2855 23 1 2.3858 1.6007 -0.9812 24 1 2.8674 0.5754 1.7856 25 1 3.1148 2.3081 1.5331 26 1 5.1671 1.0326 1.3026 27 1 4.7070 1.8345 -0.2274 28 1 6.9691 -0.2528 -2.8151 29 1 1.4239 -0.5539 -2.0395 30 1 1.9085 -1.8494 -0.9247 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259751198.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:37:54 Heat of formation + Delta-G solvation = -32.475154 kcal Electronic energy + Delta-G solvation = -13233.929908 eV Core-core repulsion = 11029.339190 eV Total energy + Delta-G solvation = -2204.590719 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.15 seconds Orbital eigenvalues (eV) -39.00663 -36.55044 -33.26687 -32.73589 -30.24218 -26.81435 -25.42231 -23.23127 -22.57265 -19.70150 -17.90631 -16.56115 -15.45936 -14.94353 -14.51958 -14.22810 -13.96400 -13.14736 -12.99346 -12.63008 -12.44595 -11.96415 -11.76212 -11.25554 -10.94933 -10.71583 -10.55283 -10.39249 -10.28835 -10.17112 -9.56683 -9.25838 -8.49638 -7.87348 -7.69074 -6.10934 -4.11698 3.31122 3.38512 3.43114 3.76513 4.39516 4.57185 5.17922 5.33041 5.48915 5.60429 5.62053 5.80820 5.95737 6.10462 6.15156 6.18992 6.28196 6.48425 6.49957 6.56671 6.69703 6.94232 7.24884 7.40163 7.62498 7.73118 7.85408 8.21311 8.86993 9.31865 9.54389 11.01320 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.046596 B = 0.012951 C = 0.011157 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 600.765731 B = 2161.462441 C = 2509.109004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.551 5.551 3 C 0.049 3.951 4 C -0.105 4.105 5 C -0.168 4.168 6 C 0.410 3.590 7 O -0.468 6.468 8 C -0.011 4.011 9 H 0.046 0.954 10 C -0.509 4.509 11 H 0.061 0.939 12 C 0.066 3.934 13 N -0.893 5.893 14 Si 0.903 3.097 15 H -0.281 1.281 16 H -0.286 1.286 17 H -0.272 1.272 18 C 0.081 3.919 19 H 0.020 0.980 20 H 0.062 0.938 21 H 0.061 0.939 22 H 0.061 0.939 23 H 0.062 0.938 24 H 0.070 0.930 25 H 0.050 0.950 26 H 0.069 0.931 27 H 0.081 0.919 28 H 0.264 0.736 29 H 0.035 0.965 30 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.864 4.333 3.283 9.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.276 5.276 3 C -0.080 4.080 4 C -0.143 4.143 5 C -0.207 4.207 6 C 0.284 3.716 7 O -0.341 6.341 8 C -0.030 4.030 9 H 0.064 0.936 10 C -0.547 4.547 11 H 0.079 0.921 12 C -0.136 4.136 13 N -0.531 5.531 14 Si 0.731 3.269 15 H -0.207 1.207 16 H -0.212 1.212 17 H -0.197 1.197 18 C -0.046 4.046 19 H 0.039 0.961 20 H 0.081 0.919 21 H 0.079 0.921 22 H 0.079 0.921 23 H 0.080 0.920 24 H 0.088 0.912 25 H 0.069 0.931 26 H 0.087 0.913 27 H 0.100 0.900 28 H 0.074 0.926 29 H 0.053 0.947 30 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -7.201 3.674 3.906 8.979 hybrid contribution 0.280 -0.081 -1.394 1.424 sum -6.922 3.593 2.512 8.193 Atomic orbital electron populations 1.22399 0.88691 1.01357 0.99844 1.62375 1.06736 1.13613 1.44856 1.21744 0.96950 0.89651 0.99665 1.20283 0.94109 1.01034 0.98898 1.21764 0.97359 1.00493 1.01073 1.24629 0.78011 0.86877 0.82086 1.90155 1.39268 1.42838 1.61789 1.19143 0.90060 0.99761 0.94025 0.93591 1.20889 0.99459 1.04659 1.29722 0.92070 1.24935 0.96803 0.95798 0.96113 1.69825 1.10536 1.27652 1.45103 0.86411 0.78329 0.82242 0.79961 1.20720 1.21162 1.19706 1.22738 0.94842 0.97658 0.89339 0.96096 0.91924 0.92057 0.92059 0.92013 0.91183 0.93120 0.91275 0.90049 0.92622 0.94666 0.91136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.36 9.23 60.06 0.55 0.91 16 2 N -0.55 -9.84 4.17 -243.12 -1.01 -10.85 16 3 C 0.05 0.80 5.51 -5.68 -0.03 0.77 16 4 C -0.10 -1.80 5.12 -30.07 -0.15 -1.95 16 5 C -0.17 -3.46 6.09 -28.82 -0.18 -3.63 16 6 C 0.41 10.46 4.60 -28.22 -0.13 10.33 16 7 O -0.47 -13.69 16.80 6.01 0.10 -13.59 16 8 C -0.01 -0.26 1.42 -93.38 -0.13 -0.40 16 9 H 0.05 1.19 6.87 -51.93 -0.36 0.83 16 10 C -0.51 -14.27 7.84 -34.44 -0.27 -14.54 16 11 H 0.06 1.68 7.64 -52.49 -0.40 1.28 16 12 C 0.07 1.88 5.05 -17.82 -0.09 1.79 16 13 N -0.89 -26.14 12.31 55.43 0.68 -25.46 16 14 Si 0.90 22.20 29.54 -169.99 -5.02 17.18 16 15 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 16 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 17 H -0.27 -6.66 7.11 56.52 0.40 -6.25 16 18 C 0.08 1.68 5.17 -2.03 -0.01 1.67 16 19 H 0.02 0.27 8.13 -51.93 -0.42 -0.15 16 20 H 0.06 0.84 8.10 -51.93 -0.42 0.42 16 21 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 22 H 0.06 0.84 7.62 -51.93 -0.40 0.44 16 23 H 0.06 1.10 5.94 -51.93 -0.31 0.80 16 24 H 0.07 1.27 7.80 -51.93 -0.40 0.86 16 25 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.07 1.37 8.14 -51.93 -0.42 0.95 16 27 H 0.08 1.64 8.14 -51.93 -0.42 1.22 16 28 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 29 H 0.04 0.69 7.99 -51.93 -0.41 0.27 16 30 H 0.07 1.52 7.92 -51.93 -0.41 1.11 16 LS Contribution 243.06 15.07 3.66 3.66 Total: -1.00 -31.15 243.06 -6.39 -37.54 By element: Atomic # 1 Polarization: 0.93 SS G_CDS: -4.36 Total: -3.43 kcal Atomic # 6 Polarization: -4.62 SS G_CDS: -0.44 Total: -5.05 kcal Atomic # 7 Polarization: -35.98 SS G_CDS: -0.33 Total: -36.31 kcal Atomic # 8 Polarization: -13.69 SS G_CDS: 0.10 Total: -13.59 kcal Atomic # 14 Polarization: 22.20 SS G_CDS: -5.02 Total: 17.18 kcal Total LS contribution 3.66 Total: 3.66 kcal Total: -31.15 -6.39 -37.54 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259751198.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.069 kcal (2) G-P(sol) polarization free energy of solvation -31.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.15 seconds