Wall clock time and date at job start Mon Mar 30 2020 02:38:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.46791 * 110.99777 * 2 1 4 4 C 1.53021 * 109.89613 * 189.45491 * 3 2 1 5 5 C 1.53382 * 109.13241 * 297.15140 * 4 3 2 6 6 H 1.09000 * 109.76982 * 292.78017 * 5 4 3 7 7 C 1.52997 * 109.73314 * 172.11591 * 5 4 3 8 8 C 1.50706 * 109.47238 * 176.33099 * 7 5 4 9 9 H 1.07999 * 119.99515 * 0.02562 * 8 7 5 10 10 C 1.37870 * 120.00176 * 180.02562 * 8 7 5 11 11 N 1.31520 * 119.99883 * 0.02562 * 10 8 7 12 12 Si 1.86800 * 120.00043 * 180.02562 * 10 8 7 13 13 H 1.48495 * 109.47216 * 359.97438 * 12 10 8 14 14 H 1.48500 * 109.47389 * 119.99848 * 12 10 8 15 15 H 1.48501 * 109.47057 * 239.99829 * 12 10 8 16 16 C 1.51418 * 108.12046 * 52.45957 * 5 4 3 17 17 O 1.20764 * 121.00594 * 130.88690 * 16 5 4 18 18 C 1.47092 * 110.99870 * 124.17501 * 2 1 3 19 19 H 1.09002 * 109.47489 * 291.87598 * 1 2 3 20 20 H 1.09005 * 109.47416 * 51.87506 * 1 2 3 21 21 H 1.09001 * 109.47113 * 171.87580 * 1 2 3 22 22 H 1.08999 * 109.40470 * 309.58263 * 3 2 1 23 23 H 1.09004 * 109.40122 * 69.41533 * 3 2 1 24 24 H 1.08992 * 109.53183 * 177.25175 * 4 3 2 25 25 H 1.09001 * 109.52575 * 57.03932 * 4 3 2 26 26 H 1.09001 * 109.46832 * 56.33413 * 7 5 4 27 27 H 1.09000 * 109.47611 * 296.33710 * 7 5 4 28 28 H 0.97004 * 119.99507 * 180.02562 * 11 10 8 29 29 H 1.08992 * 109.62923 * 60.02317 * 18 2 1 30 30 H 1.09001 * 109.62084 * 299.45081 * 18 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9950 1.3704 0.0000 4 6 3.5067 1.3480 -0.2364 5 6 4.1855 0.6047 0.9209 6 1 4.0803 1.1800 1.8407 7 6 5.6687 0.4019 0.6053 8 6 6.3487 -0.2478 1.7829 9 1 5.7796 -0.4921 2.6677 10 6 7.6971 -0.5304 1.7307 11 7 8.3902 -0.2325 0.6533 12 14 8.5397 -1.3364 3.1901 13 1 7.5466 -1.5669 4.2698 14 1 9.1242 -2.6350 2.7691 15 1 9.6184 -0.4476 3.6918 16 6 3.5079 -0.7402 1.0787 17 8 4.1544 -1.7573 1.1561 18 6 1.9961 -0.7714 1.1361 19 1 -0.3634 0.3829 0.9537 20 1 -0.3634 0.6345 -0.8084 21 1 -0.3633 -1.0174 -0.1452 22 1 1.5132 1.9433 -0.7923 23 1 1.7873 1.8380 0.9625 24 1 3.8833 2.3697 -0.2839 25 1 3.7212 0.8355 -1.1742 26 1 6.1329 1.3676 0.4052 27 1 5.7696 -0.2382 -0.2711 28 1 9.3388 -0.4317 0.6165 29 1 1.6484 -1.8023 1.0715 30 1 1.6560 -0.3253 2.0707 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259778522.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:38:47 Heat of formation + Delta-G solvation = -40.510392 kcal Electronic energy + Delta-G solvation = -12779.674790 eV Core-core repulsion = 10574.735637 eV Total energy + Delta-G solvation = -2204.939153 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -39.46018 -36.84223 -34.04091 -32.16083 -29.09888 -28.52489 -25.53217 -23.11465 -21.93950 -20.92496 -18.32983 -16.23306 -15.71014 -15.38390 -14.83526 -14.58449 -14.34490 -13.55977 -13.17835 -12.63108 -12.36572 -12.25324 -11.72937 -11.55096 -11.15019 -11.11524 -10.93264 -10.57190 -10.35800 -10.23254 -9.39278 -8.97517 -8.61412 -8.30001 -8.13985 -5.88109 -3.86340 2.74743 3.39371 3.46346 3.51301 4.08587 4.57131 4.71296 5.05662 5.18481 5.30100 5.39367 5.49058 5.58199 5.59203 5.70723 5.79986 5.97083 6.03739 6.18223 6.46814 6.70533 6.93627 7.00148 7.09733 7.66938 7.82069 8.07972 8.39611 8.50583 9.14429 9.74595 11.24068 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.064994 B = 0.009330 C = 0.008582 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 430.706403 B = 3000.353346 C = 3262.012467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.535 5.535 3 C 0.050 3.950 4 C -0.108 4.108 5 C -0.131 4.131 6 H 0.087 0.913 7 C 0.035 3.965 8 C -0.496 4.496 9 H 0.051 0.949 10 C 0.054 3.946 11 N -0.900 5.900 12 Si 0.891 3.109 13 H -0.275 1.275 14 H -0.285 1.285 15 H -0.286 1.286 16 C 0.363 3.637 17 O -0.416 6.416 18 C 0.004 3.996 19 H 0.025 0.975 20 H 0.069 0.931 21 H 0.068 0.932 22 H 0.075 0.925 23 H 0.035 0.965 24 H 0.075 0.925 25 H 0.072 0.928 26 H 0.023 0.977 27 H 0.021 0.979 28 H 0.258 0.742 29 H 0.092 0.908 30 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.313 3.489 -0.461 14.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.261 5.261 3 C -0.077 4.077 4 C -0.146 4.146 5 C -0.150 4.150 6 H 0.105 0.895 7 C -0.002 4.002 8 C -0.534 4.534 9 H 0.069 0.931 10 C -0.145 4.145 11 N -0.541 5.541 12 Si 0.719 3.281 13 H -0.199 1.199 14 H -0.211 1.211 15 H -0.212 1.212 16 C 0.234 3.766 17 O -0.284 6.284 18 C -0.125 4.125 19 H 0.043 0.957 20 H 0.087 0.913 21 H 0.086 0.914 22 H 0.094 0.906 23 H 0.054 0.946 24 H 0.093 0.907 25 H 0.091 0.909 26 H 0.041 0.959 27 H 0.040 0.960 28 H 0.067 0.933 29 H 0.110 0.890 30 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -13.617 2.677 -0.910 13.907 hybrid contribution 0.123 -0.020 1.546 1.551 sum -13.494 2.658 0.636 13.768 Atomic orbital electron populations 1.22384 0.87229 1.02384 1.00258 1.62004 1.07536 1.14336 1.42273 1.22228 0.96815 0.88365 1.00323 1.21676 0.92393 1.00972 0.99521 1.22084 1.00201 0.94184 0.98542 0.89544 1.19029 0.86200 0.97279 0.97661 1.21101 0.93376 1.38382 1.00570 0.93069 1.24939 0.97603 0.96075 0.95928 1.69969 1.07717 1.48802 1.27594 0.86555 0.79355 0.79191 0.82998 1.19939 1.21090 1.21239 1.24646 0.89056 0.91511 0.71386 1.90433 1.67863 1.36975 1.33136 1.23039 0.96555 0.99992 0.92867 0.95687 0.91262 0.91370 0.90639 0.94643 0.90681 0.90884 0.95908 0.96037 0.93262 0.88997 0.92261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.63 60.06 0.58 0.85 16 2 N -0.54 -7.54 4.92 -243.90 -1.20 -8.74 16 3 C 0.05 0.67 5.37 -3.87 -0.02 0.64 16 4 C -0.11 -1.75 5.43 -26.52 -0.14 -1.90 16 5 C -0.13 -2.68 2.48 -91.22 -0.23 -2.91 16 6 H 0.09 1.68 8.14 -51.93 -0.42 1.26 16 7 C 0.04 0.93 4.18 -27.88 -0.12 0.81 16 8 C -0.50 -14.57 7.63 -34.44 -0.26 -14.83 16 9 H 0.05 1.50 7.46 -52.49 -0.39 1.11 16 10 C 0.05 1.63 5.46 -17.82 -0.10 1.53 16 11 N -0.90 -28.05 13.29 55.43 0.74 -27.31 16 12 Si 0.89 22.90 29.54 -169.99 -5.02 17.88 16 13 H -0.27 -6.96 7.11 56.52 0.40 -6.55 16 14 H -0.28 -7.31 7.11 56.52 0.40 -6.90 16 15 H -0.29 -7.16 7.11 56.52 0.40 -6.75 16 16 C 0.36 7.49 6.49 -28.38 -0.18 7.31 16 17 O -0.42 -10.47 15.68 6.00 0.09 -10.38 16 18 C 0.00 0.06 5.71 -4.57 -0.03 0.03 16 19 H 0.02 0.24 8.14 -51.93 -0.42 -0.18 16 20 H 0.07 0.62 7.97 -51.93 -0.41 0.21 16 21 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 22 H 0.08 0.84 7.96 -51.93 -0.41 0.43 16 23 H 0.04 0.44 8.13 -51.93 -0.42 0.02 16 24 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 25 H 0.07 1.27 8.14 -51.93 -0.42 0.85 16 26 H 0.02 0.62 8.14 -51.93 -0.42 0.19 16 27 H 0.02 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.26 7.57 8.31 -40.82 -0.34 7.23 16 29 H 0.09 1.37 8.14 -51.93 -0.42 0.94 16 30 H 0.06 0.81 8.14 -51.93 -0.42 0.39 16 LS Contribution 250.21 15.07 3.77 3.77 Total: -1.00 -33.16 250.21 -6.70 -39.85 By element: Atomic # 1 Polarization: -2.06 SS G_CDS: -4.58 Total: -6.64 kcal Atomic # 6 Polarization: -7.95 SS G_CDS: -0.50 Total: -8.45 kcal Atomic # 7 Polarization: -35.58 SS G_CDS: -0.46 Total: -36.04 kcal Atomic # 8 Polarization: -10.47 SS G_CDS: 0.09 Total: -10.38 kcal Atomic # 14 Polarization: 22.90 SS G_CDS: -5.02 Total: 17.88 kcal Total LS contribution 3.77 Total: 3.77 kcal Total: -33.16 -6.70 -39.85 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259778522.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.656 kcal (2) G-P(sol) polarization free energy of solvation -33.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.812 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.698 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.854 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds