Wall clock time and date at job start Mon Mar 30 2020 01:57:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53002 * 109.46896 * 2 1 4 4 C 1.53000 * 109.47337 * 119.99811 * 2 1 3 5 5 H 1.09001 * 110.85737 * 301.62970 * 4 2 1 6 6 C 1.54632 * 110.96816 * 177.79599 * 4 2 1 7 7 C 1.51282 * 104.19337 * 217.08292 * 6 4 2 8 8 O 1.21280 * 124.94394 * 196.25248 * 7 6 4 9 9 N 1.34419 * 110.11796 * 16.25464 * 7 6 4 10 10 C 1.46770 * 111.29883 * 0.40789 * 9 7 6 11 11 H 1.09002 * 110.24509 * 223.98347 * 10 9 7 12 12 C 1.50699 * 110.24938 * 101.98379 * 10 9 7 13 13 H 1.08000 * 119.99644 * 279.23094 * 12 10 9 14 14 C 1.37872 * 119.99835 * 99.22369 * 12 10 9 15 15 N 1.31512 * 120.00500 * 0.02562 * 14 12 10 16 16 Si 1.86808 * 119.99829 * 180.02562 * 14 12 10 17 17 H 1.48501 * 109.46819 * 0.02562 * 16 14 12 18 18 H 1.48501 * 109.46865 * 119.99989 * 16 14 12 19 19 H 1.48495 * 109.47262 * 240.00100 * 16 14 12 20 20 H 1.09000 * 109.46930 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.47376 * 299.99744 * 1 2 3 22 22 H 1.08997 * 109.47306 * 60.00351 * 1 2 3 23 23 H 1.08996 * 109.47376 * 240.00256 * 2 1 3 24 24 H 1.09004 * 109.47267 * 180.02562 * 3 2 1 25 25 H 1.08997 * 109.47255 * 300.00289 * 3 2 1 26 26 H 1.09005 * 109.47130 * 59.99906 * 3 2 1 27 27 H 1.08995 * 110.48926 * 335.75979 * 6 4 2 28 28 H 1.08999 * 110.48676 * 98.40926 * 6 4 2 29 29 H 0.97000 * 124.35742 * 180.42823 * 9 7 6 30 30 H 0.97000 * 120.00451 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6658 -0.2421 2.1540 6 6 3.5848 -0.7896 1.2567 7 6 3.8931 -2.1478 1.8474 8 8 4.9726 -2.4867 2.2840 9 7 2.7964 -2.9245 1.8180 10 6 1.6585 -2.2178 1.2180 11 1 0.7560 -2.3894 1.8047 12 6 1.4521 -2.6738 -0.2035 13 1 2.0633 -2.2665 -0.9953 14 6 0.4833 -3.6111 -0.4929 15 7 -0.2611 -4.1068 0.4712 16 14 0.2280 -4.1769 -2.2549 17 1 1.1863 -3.4730 -3.1445 18 1 0.4562 -5.6416 -2.3423 19 1 -1.1610 -3.8662 -2.6782 20 1 -0.3633 -1.0277 0.0005 21 1 -0.3634 0.5138 0.8900 22 1 -0.3634 0.5138 -0.8900 23 1 1.8933 -0.5138 -0.8900 24 1 3.1299 1.4426 -0.0005 25 1 1.6765 1.9564 -0.8899 26 1 1.6765 1.9564 0.8900 27 1 3.9748 -0.7178 0.2415 28 1 3.9987 0.0012 1.8823 29 1 2.7613 -3.8349 2.1509 30 1 -0.9429 -4.7660 0.2675 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260614376.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:57:00 Heat of formation + Delta-G solvation = -60.270780 kcal Electronic energy + Delta-G solvation = -13137.867416 eV Core-core repulsion = 10932.071389 eV Total energy + Delta-G solvation = -2205.796027 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -39.40013 -36.43306 -33.75849 -32.53351 -29.25902 -27.68937 -25.98994 -24.12720 -21.35410 -19.36575 -19.08093 -16.47875 -16.32897 -14.78684 -14.50255 -14.23325 -13.53187 -13.00018 -12.96927 -12.51755 -12.24892 -11.95096 -11.57926 -11.26225 -11.09442 -10.89226 -10.67828 -10.39020 -10.16421 -9.98516 -9.46533 -9.17593 -8.86750 -8.68827 -7.75562 -6.25252 -4.34532 3.16538 3.27040 3.30272 3.62860 4.25134 4.60256 5.12117 5.38887 5.44717 5.64623 5.82243 5.98778 6.01673 6.20787 6.28789 6.44272 6.46311 6.56867 6.62624 6.70173 6.92011 7.20723 7.24092 7.37745 7.67419 8.03571 8.08158 8.31699 8.76064 9.30686 9.41794 10.78896 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.028287 B = 0.016140 C = 0.011975 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 989.629366 B = 1734.434075 C = 2337.723934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.069 4.069 3 C -0.150 4.150 4 C -0.089 4.089 5 H 0.063 0.937 6 C -0.143 4.143 7 C 0.506 3.494 8 O -0.588 6.588 9 N -0.706 5.706 10 C 0.238 3.762 11 H 0.075 0.925 12 C -0.514 4.514 13 H 0.064 0.936 14 C 0.074 3.926 15 N -0.885 5.885 16 Si 0.891 3.109 17 H -0.270 1.270 18 H -0.283 1.283 19 H -0.281 1.281 20 H 0.084 0.916 21 H 0.035 0.965 22 H 0.036 0.964 23 H 0.086 0.914 24 H 0.048 0.952 25 H 0.045 0.955 26 H 0.045 0.955 27 H 0.092 0.908 28 H 0.078 0.922 29 H 0.395 0.605 30 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.377 6.845 -1.191 6.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.088 4.088 3 C -0.207 4.207 4 C -0.108 4.108 5 H 0.082 0.918 6 C -0.183 4.183 7 C 0.292 3.708 8 O -0.471 6.471 9 N -0.356 5.356 10 C 0.138 3.862 11 H 0.093 0.907 12 C -0.553 4.553 13 H 0.082 0.918 14 C -0.131 4.131 15 N -0.522 5.522 16 Si 0.718 3.282 17 H -0.195 1.195 18 H -0.209 1.209 19 H -0.207 1.207 20 H 0.103 0.897 21 H 0.054 0.946 22 H 0.055 0.945 23 H 0.104 0.896 24 H 0.067 0.933 25 H 0.065 0.935 26 H 0.064 0.936 27 H 0.111 0.889 28 H 0.096 0.904 29 H 0.231 0.769 30 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -0.032 6.676 -0.978 6.747 hybrid contribution -0.288 -0.820 -0.851 1.217 sum -0.320 5.856 -1.830 6.143 Atomic orbital electron populations 1.21803 0.95353 1.03728 0.99030 1.20946 0.96045 0.93220 0.98561 1.21961 1.00483 0.97678 1.00617 1.22190 0.92678 0.98214 0.97719 0.91849 1.22276 0.98217 0.95706 1.02138 1.20912 0.83743 0.88271 0.77915 1.90609 1.25994 1.79236 1.51309 1.47339 1.13040 1.16103 1.59145 1.19637 0.86013 0.85990 0.94583 0.90686 1.21296 1.18052 1.23458 0.92498 0.91810 1.25037 0.95303 0.95353 0.97365 1.69899 1.21406 1.29010 1.31894 0.86550 0.78204 0.78711 0.84713 1.19463 1.20929 1.20714 0.89684 0.94575 0.94483 0.89626 0.93286 0.93543 0.93563 0.88948 0.90351 0.76882 0.92458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.48 8.89 37.15 0.33 -2.15 16 2 C -0.07 -1.19 1.87 -90.62 -0.17 -1.36 16 3 C -0.15 -2.14 9.00 37.16 0.33 -1.80 16 4 C -0.09 -1.66 2.58 -88.99 -0.23 -1.89 16 5 H 0.06 1.13 8.14 -51.93 -0.42 0.70 16 6 C -0.14 -2.67 5.40 -26.74 -0.14 -2.82 16 7 C 0.51 11.30 8.43 -10.86 -0.09 11.21 16 8 O -0.59 -14.83 18.03 5.56 0.10 -14.73 16 9 N -0.71 -15.78 5.86 -53.88 -0.32 -16.09 16 10 C 0.24 5.30 3.04 -68.16 -0.21 5.09 16 11 H 0.08 1.83 7.29 -51.93 -0.38 1.45 16 12 C -0.51 -12.29 6.03 -34.44 -0.21 -12.50 16 13 H 0.06 1.54 6.30 -52.49 -0.33 1.21 16 14 C 0.07 1.84 5.24 -17.82 -0.09 1.74 16 15 N -0.88 -22.93 12.79 55.43 0.71 -22.22 16 16 Si 0.89 19.68 29.54 -169.99 -5.02 14.66 16 17 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 18 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 19 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 20 H 0.08 1.75 6.23 -51.93 -0.32 1.43 16 21 H 0.04 0.58 8.14 -51.93 -0.42 0.15 16 22 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 23 H 0.09 1.62 5.96 -51.93 -0.31 1.31 16 24 H 0.05 0.66 7.31 -51.93 -0.38 0.28 16 25 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 26 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.09 1.67 7.82 -51.93 -0.41 1.27 16 28 H 0.08 1.31 8.14 -51.93 -0.42 0.88 16 29 H 0.39 8.74 8.96 -40.82 -0.37 8.38 16 30 H 0.27 6.62 8.31 -40.82 -0.34 6.28 16 LS Contribution 245.06 15.07 3.69 3.69 Total: -1.00 -27.08 245.06 -5.48 -32.56 By element: Atomic # 1 Polarization: 10.77 SS G_CDS: -4.17 Total: 6.61 kcal Atomic # 6 Polarization: -3.99 SS G_CDS: -0.48 Total: -4.47 kcal Atomic # 7 Polarization: -38.71 SS G_CDS: 0.39 Total: -38.31 kcal Atomic # 8 Polarization: -14.83 SS G_CDS: 0.10 Total: -14.73 kcal Atomic # 14 Polarization: 19.68 SS G_CDS: -5.02 Total: 14.66 kcal Total LS contribution 3.69 Total: 3.69 kcal Total: -27.08 -5.48 -32.56 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260614376.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.716 kcal (2) G-P(sol) polarization free energy of solvation -27.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.555 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.271 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds