Wall clock time and date at job start Mon Mar 30 2020 01:57:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53005 * 109.47420 * 2 1 4 4 C 1.52997 * 109.47260 * 120.00178 * 2 1 3 5 5 H 1.08998 * 110.88409 * 298.39477 * 4 2 1 6 6 C 1.54628 * 110.97196 * 62.20810 * 4 2 1 7 7 C 1.51283 * 104.19345 * 142.91606 * 6 4 2 8 8 O 1.21283 * 124.93790 * 163.78452 * 7 6 4 9 9 N 1.34416 * 110.12162 * 343.74734 * 7 6 4 10 10 C 1.46769 * 111.29648 * 359.59285 * 9 7 6 11 11 H 1.09001 * 110.31568 * 136.05434 * 10 9 7 12 12 C 1.50691 * 110.24803 * 258.01381 * 10 9 7 13 13 H 1.07998 * 120.00382 * 80.77073 * 12 10 9 14 14 C 1.37879 * 119.99804 * 261.05251 * 12 10 9 15 15 N 1.31512 * 120.00433 * 359.72206 * 14 12 10 16 16 Si 1.86805 * 119.99818 * 179.72469 * 14 12 10 17 17 H 1.48492 * 109.47342 * 89.99938 * 16 14 12 18 18 H 1.48498 * 109.46961 * 209.99987 * 16 14 12 19 19 H 1.48507 * 109.47171 * 329.99598 * 16 14 12 20 20 H 1.08998 * 109.47471 * 180.02562 * 1 2 3 21 21 H 1.09000 * 109.46835 * 299.99862 * 1 2 3 22 22 H 1.08995 * 109.47334 * 59.99581 * 1 2 3 23 23 H 1.09000 * 109.46835 * 240.00138 * 2 1 3 24 24 H 1.08993 * 109.47536 * 180.02562 * 3 2 1 25 25 H 1.09003 * 109.46940 * 300.00529 * 3 2 1 26 26 H 1.08996 * 109.46982 * 59.99752 * 3 2 1 27 27 H 1.09000 * 110.48808 * 261.59397 * 6 4 2 28 28 H 1.09000 * 110.48195 * 24.24356 * 6 4 2 29 29 H 0.96994 * 124.35265 * 179.59129 * 9 7 6 30 30 H 0.96993 * 120.00475 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.7129 -0.2093 2.1542 6 6 1.5898 -2.2005 1.2567 7 6 2.7676 -2.9438 1.8474 8 8 2.7274 -4.0748 2.2833 9 7 3.8654 -2.1686 1.8179 10 6 3.5782 -0.8603 1.2179 11 1 4.0408 -0.0657 1.8034 12 6 4.0769 -0.8177 -0.2034 13 1 3.4893 -1.2580 -0.9954 14 6 5.2862 -0.2215 -0.4921 15 7 6.0019 0.3147 0.4722 16 14 5.9080 -0.1754 -2.2530 17 1 5.4223 1.0606 -2.9173 18 1 7.3929 -0.1871 -2.2540 19 1 5.4032 -1.3633 -2.9875 20 1 -0.3634 -1.0276 0.0005 21 1 -0.3633 0.5138 0.8900 22 1 -0.3634 0.5139 -0.8899 23 1 1.8932 -0.5138 -0.8900 24 1 3.1300 1.4425 -0.0005 25 1 1.6766 1.9564 -0.8900 26 1 1.6767 1.9563 0.8899 27 1 0.7062 -2.3272 1.8823 28 1 1.3921 -2.5442 0.2414 29 1 4.7355 -2.4391 2.1505 30 1 6.8527 0.7338 0.2692 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260614387.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:57:02 Heat of formation + Delta-G solvation = -60.241257 kcal Electronic energy + Delta-G solvation = -13137.457486 eV Core-core repulsion = 10931.662739 eV Total energy + Delta-G solvation = -2205.794747 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -39.39932 -36.43167 -33.75867 -32.53152 -29.25877 -27.68938 -25.98939 -24.12469 -21.35273 -19.36533 -19.08115 -16.47617 -16.32821 -14.78509 -14.50305 -14.23299 -13.53427 -13.00052 -12.96850 -12.50866 -12.24999 -11.95081 -11.57949 -11.26999 -11.07244 -10.88165 -10.67737 -10.41765 -10.16632 -9.98723 -9.46844 -9.17463 -8.86378 -8.68356 -7.75622 -6.25004 -4.34377 3.17486 3.26577 3.29835 3.62979 4.25242 4.60380 5.12256 5.38943 5.44692 5.64604 5.82297 5.98750 6.01696 6.20822 6.28862 6.44307 6.46262 6.56943 6.62638 6.70187 6.92072 7.20561 7.24171 7.37943 7.67442 8.03734 8.08306 8.31794 8.75920 9.30794 9.41888 10.79098 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.028264 B = 0.016143 C = 0.011974 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 990.438269 B = 1734.118208 C = 2337.800609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.069 4.069 3 C -0.142 4.142 4 C -0.089 4.089 5 H 0.063 0.937 6 C -0.143 4.143 7 C 0.506 3.494 8 O -0.588 6.588 9 N -0.706 5.706 10 C 0.239 3.761 11 H 0.075 0.925 12 C -0.515 4.515 13 H 0.063 0.937 14 C 0.074 3.926 15 N -0.885 5.885 16 Si 0.891 3.109 17 H -0.277 1.277 18 H -0.286 1.286 19 H -0.272 1.272 20 H 0.048 0.952 21 H 0.045 0.955 22 H 0.046 0.954 23 H 0.085 0.915 24 H 0.084 0.916 25 H 0.036 0.964 26 H 0.035 0.965 27 H 0.078 0.922 28 H 0.092 0.908 29 H 0.395 0.605 30 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.315 2.650 -1.188 6.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.088 4.088 3 C -0.199 4.199 4 C -0.108 4.108 5 H 0.081 0.919 6 C -0.183 4.183 7 C 0.292 3.708 8 O -0.472 6.472 9 N -0.356 5.356 10 C 0.138 3.862 11 H 0.093 0.907 12 C -0.554 4.554 13 H 0.081 0.919 14 C -0.130 4.130 15 N -0.522 5.522 16 Si 0.718 3.282 17 H -0.202 1.202 18 H -0.212 1.212 19 H -0.197 1.197 20 H 0.067 0.933 21 H 0.064 0.936 22 H 0.065 0.935 23 H 0.104 0.896 24 H 0.103 0.897 25 H 0.055 0.945 26 H 0.054 0.946 27 H 0.096 0.904 28 H 0.110 0.890 29 H 0.231 0.769 30 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -6.265 2.267 -0.973 6.733 hybrid contribution 0.860 -0.007 -0.859 1.216 sum -5.405 2.261 -1.832 6.138 Atomic orbital electron populations 1.21958 0.97361 1.00803 1.00621 1.20944 0.92483 0.96776 0.98550 1.21803 1.04117 0.94959 0.99021 1.22189 0.97938 0.92954 0.97716 0.91851 1.22277 0.97017 0.96912 1.02135 1.20911 0.86779 0.85241 0.77911 1.90609 1.86227 1.18987 1.51332 1.47336 1.10541 1.18589 1.59147 1.19626 0.89907 0.82094 0.94574 0.90676 1.21259 1.04499 1.37128 0.92495 0.91878 1.25037 0.96352 0.94290 0.97355 1.69888 1.13524 1.36849 1.31949 0.86602 0.78091 0.78754 0.84725 1.20238 1.21152 1.19692 0.93283 0.93568 0.93535 0.89644 0.89681 0.94500 0.94573 0.90352 0.88951 0.76884 0.92401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.14 9.00 37.16 0.33 -1.80 16 2 C -0.07 -1.19 1.87 -90.62 -0.17 -1.36 16 3 C -0.14 -2.48 8.89 37.16 0.33 -2.15 16 4 C -0.09 -1.66 2.58 -88.99 -0.23 -1.89 16 5 H 0.06 1.13 8.14 -51.93 -0.42 0.70 16 6 C -0.14 -2.67 5.40 -26.74 -0.14 -2.82 16 7 C 0.51 11.31 8.43 -10.86 -0.09 11.22 16 8 O -0.59 -14.85 18.03 5.56 0.10 -14.75 16 9 N -0.71 -15.78 5.86 -53.88 -0.32 -16.10 16 10 C 0.24 5.30 3.04 -68.16 -0.21 5.10 16 11 H 0.08 1.83 7.29 -51.93 -0.38 1.45 16 12 C -0.51 -12.31 6.03 -34.44 -0.21 -12.52 16 13 H 0.06 1.52 6.30 -52.49 -0.33 1.19 16 14 C 0.07 1.84 5.25 -17.82 -0.09 1.75 16 15 N -0.88 -22.93 12.79 55.43 0.71 -22.23 16 16 Si 0.89 19.68 29.54 -169.99 -5.02 14.66 16 17 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 18 H -0.29 -6.40 7.11 56.52 0.40 -6.00 16 19 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 20 H 0.05 0.66 7.31 -51.93 -0.38 0.28 16 21 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 22 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 23 H 0.09 1.62 5.97 -51.93 -0.31 1.31 16 24 H 0.08 1.76 6.24 -51.93 -0.32 1.43 16 25 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 26 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 27 H 0.08 1.31 8.14 -51.93 -0.42 0.88 16 28 H 0.09 1.67 7.82 -51.93 -0.41 1.27 16 29 H 0.39 8.75 8.96 -40.82 -0.37 8.38 16 30 H 0.27 6.66 8.31 -40.82 -0.34 6.32 16 LS Contribution 245.08 15.07 3.69 3.69 Total: -1.00 -27.07 245.08 -5.48 -32.55 By element: Atomic # 1 Polarization: 10.81 SS G_CDS: -4.17 Total: 6.64 kcal Atomic # 6 Polarization: -3.98 SS G_CDS: -0.48 Total: -4.46 kcal Atomic # 7 Polarization: -38.72 SS G_CDS: 0.39 Total: -38.33 kcal Atomic # 8 Polarization: -14.85 SS G_CDS: 0.10 Total: -14.75 kcal Atomic # 14 Polarization: 19.68 SS G_CDS: -5.02 Total: 14.66 kcal Total LS contribution 3.69 Total: 3.69 kcal Total: -27.07 -5.48 -32.55 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260614387.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.694 kcal (2) G-P(sol) polarization free energy of solvation -27.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds