Wall clock time and date at job start Mon Mar 30 2020 02:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 O 1.21289 * 120.00436 * 2 1 4 4 N 1.34778 * 120.00084 * 180.02562 * 2 1 3 5 5 C 1.46502 * 120.00243 * 179.97438 * 4 2 1 6 6 H 1.09001 * 110.01576 * 34.93218 * 5 4 2 7 7 C 1.54268 * 110.03125 * 273.54639 * 5 4 2 8 8 C 1.54887 * 104.19348 * 217.05546 * 7 5 4 9 9 C 1.54884 * 102.75103 * 37.94330 * 8 7 5 10 10 H 1.09005 * 110.49073 * 80.86340 * 9 8 7 11 11 C 1.50695 * 110.48909 * 203.38135 * 9 8 7 12 12 H 1.08004 * 120.00546 * 117.03188 * 11 9 8 13 13 C 1.37885 * 119.99721 * 296.75440 * 11 9 8 14 14 N 1.31514 * 120.00035 * 0.02562 * 13 11 9 15 15 Si 1.86803 * 119.99853 * 179.97438 * 13 11 9 16 16 H 1.48500 * 109.46986 * 90.00256 * 15 13 11 17 17 H 1.48496 * 109.47029 * 210.00273 * 15 13 11 18 18 H 1.48499 * 109.47352 * 330.00102 * 15 13 11 19 19 C 1.54079 * 109.97098 * 156.38487 * 5 4 2 20 20 H 1.08998 * 109.46790 * 239.99873 * 1 2 3 21 21 H 1.09005 * 109.47047 * 359.97438 * 1 2 3 22 22 H 1.08997 * 109.47453 * 119.99247 * 1 2 3 23 23 H 0.97003 * 119.99658 * 359.97438 * 4 2 1 24 24 H 1.08997 * 110.48885 * 98.37890 * 7 5 4 25 25 H 1.09003 * 110.48562 * 335.73267 * 7 5 4 26 26 H 1.08995 * 110.75515 * 279.62432 * 8 7 5 27 27 H 1.09002 * 110.91131 * 156.32889 * 8 7 5 28 28 H 0.97000 * 119.99706 * 179.97438 * 14 13 11 29 29 H 1.09004 * 110.16429 * 0.14959 * 19 5 4 30 30 H 1.08996 * 110.00955 * 238.64626 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0503 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 3.6459 -1.1672 -0.0011 6 1 4.0192 -0.3277 0.5854 7 6 4.1738 -1.0773 -1.4479 8 6 5.4297 -1.9837 -1.4509 9 6 5.0047 -3.1597 -0.5370 10 1 4.3967 -3.8740 -1.0921 11 6 6.2169 -3.8406 0.0445 12 1 6.3756 -3.8411 1.1128 13 6 7.1204 -4.4679 -0.7870 14 7 6.9246 -4.4716 -2.0875 15 14 8.6234 -5.3112 -0.0664 16 1 8.2978 -6.7278 0.2380 17 1 9.7378 -5.2590 -1.0464 18 1 9.0294 -4.6173 1.1822 19 6 4.1723 -2.4943 0.5785 20 1 -0.3633 -0.5139 0.8900 21 1 -0.3633 1.0277 0.0005 22 1 -0.3634 -0.5137 -0.8900 23 1 1.6958 -2.0073 -0.0005 24 1 4.4442 -0.0500 -1.6921 25 1 3.4296 -1.4541 -2.1496 26 1 6.2867 -1.4578 -1.0304 27 1 5.6515 -2.3377 -2.4577 28 1 7.5604 -4.9126 -2.6724 29 1 3.3391 -3.1392 0.8577 30 1 4.8009 -2.2985 1.4472 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261035938.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:36:57 Heat of formation + Delta-G solvation = -61.533027 kcal Electronic energy + Delta-G solvation = -12549.801666 eV Core-core repulsion = 10343.950903 eV Total energy + Delta-G solvation = -2205.850762 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -39.43797 -36.99503 -33.62400 -32.03983 -29.75302 -28.14846 -26.55546 -23.77997 -20.50854 -19.62714 -19.20175 -16.79114 -16.23724 -15.72785 -14.95676 -14.54742 -13.65245 -13.58543 -12.90580 -12.56981 -12.39738 -12.16540 -11.77556 -11.08899 -10.95708 -10.73376 -10.62631 -10.31904 -9.93682 -9.58052 -9.54137 -9.22389 -8.80127 -8.56028 -8.36478 -6.01029 -4.04077 2.89530 3.30506 3.37667 3.40809 3.60846 4.44043 4.99043 5.27789 5.31015 5.37471 5.56792 5.69348 5.82904 5.88120 6.32574 6.40061 6.54984 6.68535 6.75666 6.93130 6.98708 7.25603 7.37460 7.71229 7.85798 7.86931 8.01933 8.43221 8.53157 8.98326 9.60096 11.08275 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.085246 B = 0.007608 C = 0.007424 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 328.380685 B = 3679.577736 C = 3770.585724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.503 3.497 3 O -0.556 6.556 4 N -0.720 5.720 5 C 0.137 3.863 6 H 0.078 0.922 7 C -0.136 4.136 8 C -0.099 4.099 9 C 0.049 3.951 10 H 0.030 0.970 11 C -0.515 4.515 12 H 0.055 0.945 13 C 0.062 3.938 14 N -0.890 5.890 15 Si 0.889 3.111 16 H -0.281 1.281 17 H -0.287 1.287 18 H -0.274 1.274 19 C -0.122 4.122 20 H 0.084 0.916 21 H 0.087 0.913 22 H 0.085 0.915 23 H 0.398 0.602 24 H 0.050 0.950 25 H 0.055 0.945 26 H 0.049 0.951 27 H 0.070 0.930 28 H 0.260 0.740 29 H 0.049 0.951 30 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.964 3.739 2.675 10.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.290 3.710 3 O -0.434 6.434 4 N -0.371 5.371 5 C 0.033 3.967 6 H 0.096 0.904 7 C -0.174 4.174 8 C -0.138 4.138 9 C 0.030 3.970 10 H 0.048 0.952 11 C -0.553 4.553 12 H 0.074 0.926 13 C -0.140 4.140 14 N -0.528 5.528 15 Si 0.718 3.282 16 H -0.208 1.208 17 H -0.213 1.213 18 H -0.199 1.199 19 C -0.160 4.160 20 H 0.103 0.897 21 H 0.106 0.894 22 H 0.104 0.896 23 H 0.232 0.768 24 H 0.069 0.931 25 H 0.074 0.926 26 H 0.068 0.932 27 H 0.088 0.912 28 H 0.069 0.931 29 H 0.068 0.932 30 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -9.438 4.430 2.518 10.726 hybrid contribution 0.597 -0.942 0.277 1.149 sum -8.841 3.488 2.795 9.907 Atomic orbital electron populations 1.21917 0.92527 1.04994 1.03949 1.20765 0.90347 0.83979 0.75935 1.90694 1.70938 1.31554 1.50243 1.46432 1.08204 1.08144 1.74311 1.21909 0.77565 0.99618 0.97617 0.90356 1.22841 0.99658 0.99801 0.95122 1.22425 0.93806 0.95662 1.01887 1.19442 0.93922 0.92707 0.90898 0.95201 1.21195 1.06913 1.34142 0.93078 0.92647 1.24984 0.98008 0.96095 0.94864 1.69957 1.36510 1.43817 1.02532 0.86637 0.82792 0.79873 0.78945 1.20765 1.21278 1.19925 1.22623 0.99068 0.93577 1.00695 0.89735 0.89422 0.89650 0.76825 0.93069 0.92597 0.93196 0.91171 0.93075 0.93227 0.91742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.71 10.32 36.00 0.37 -1.33 16 2 C 0.50 7.68 7.93 -10.99 -0.09 7.59 16 3 O -0.56 -11.02 16.76 5.55 0.09 -10.93 16 4 N -0.72 -10.89 5.05 -52.61 -0.27 -11.16 16 5 C 0.14 2.54 3.23 -66.70 -0.22 2.32 16 6 H 0.08 1.55 7.61 -51.93 -0.39 1.16 16 7 C -0.14 -2.70 6.52 -25.07 -0.16 -2.86 16 8 C -0.10 -2.32 5.68 -24.74 -0.14 -2.46 16 9 C 0.05 1.18 2.75 -90.11 -0.25 0.93 16 10 H 0.03 0.78 8.14 -51.93 -0.42 0.35 16 11 C -0.52 -13.91 8.48 -34.44 -0.29 -14.20 16 12 H 0.06 1.48 7.56 -52.48 -0.40 1.08 16 13 C 0.06 1.71 5.34 -17.82 -0.10 1.61 16 14 N -0.89 -25.35 12.13 55.43 0.67 -24.68 16 15 Si 0.89 21.14 29.54 -169.99 -5.02 16.12 16 16 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 17 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 18 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 19 C -0.12 -2.41 6.14 -25.50 -0.16 -2.57 16 20 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 21 H 0.09 0.84 8.12 -51.93 -0.42 0.42 16 22 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 23 H 0.40 4.91 8.30 -40.82 -0.34 4.57 16 24 H 0.05 1.01 8.14 -51.93 -0.42 0.59 16 25 H 0.06 1.07 8.05 -51.93 -0.42 0.66 16 26 H 0.05 1.21 8.05 -51.93 -0.42 0.79 16 27 H 0.07 1.78 7.45 -51.93 -0.39 1.39 16 28 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 29 H 0.05 0.88 7.61 -51.93 -0.40 0.49 16 30 H 0.06 1.31 7.67 -51.93 -0.40 0.91 16 LS Contribution 252.48 15.07 3.80 3.80 Total: -1.00 -30.72 252.48 -6.14 -36.85 By element: Atomic # 1 Polarization: 5.35 SS G_CDS: -4.39 Total: 0.96 kcal Atomic # 6 Polarization: -9.94 SS G_CDS: -1.03 Total: -10.97 kcal Atomic # 7 Polarization: -36.25 SS G_CDS: 0.41 Total: -35.84 kcal Atomic # 8 Polarization: -11.02 SS G_CDS: 0.09 Total: -10.93 kcal Atomic # 14 Polarization: 21.14 SS G_CDS: -5.02 Total: 16.12 kcal Total LS contribution 3.80 Total: 3.80 kcal Total: -30.72 -6.14 -36.85 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261035938.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.679 kcal (2) G-P(sol) polarization free energy of solvation -30.717 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.854 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds