Wall clock time and date at job start Mon Mar 30 2020 02:36:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.21285 * 120.00095 * 2 1 4 4 N 1.34780 * 120.00244 * 179.97438 * 2 1 3 5 5 C 1.46500 * 120.00093 * 180.02562 * 4 2 1 6 6 H 1.08995 * 110.01401 * 325.06809 * 5 4 2 7 7 C 1.54266 * 110.03070 * 86.45671 * 5 4 2 8 8 C 1.54894 * 104.31305 * 95.65382 * 7 5 4 9 9 C 1.55238 * 102.58338 * 37.93170 * 8 7 5 10 10 H 1.09006 * 110.46947 * 80.77225 * 9 8 7 11 11 C 1.50703 * 110.57792 * 203.33635 * 9 8 7 12 12 H 1.08000 * 119.99590 * 114.88349 * 11 9 8 13 13 C 1.37871 * 119.99856 * 294.87156 * 11 9 8 14 14 N 1.31513 * 120.00546 * 0.02562 * 13 11 9 15 15 Si 1.86805 * 119.99762 * 180.02562 * 13 11 9 16 16 H 1.48491 * 109.47622 * 90.00134 * 15 13 11 17 17 H 1.48510 * 109.46951 * 210.00356 * 15 13 11 18 18 H 1.48505 * 109.47046 * 330.00003 * 15 13 11 19 19 C 1.53869 * 110.06928 * 203.64661 * 5 4 2 20 20 H 1.09002 * 109.47440 * 240.00048 * 1 2 3 21 21 H 1.09001 * 109.46897 * 0.02562 * 1 2 3 22 22 H 1.08998 * 109.46894 * 119.99904 * 1 2 3 23 23 H 0.96999 * 119.99541 * 0.02562 * 4 2 1 24 24 H 1.09002 * 110.48629 * 214.40135 * 7 5 4 25 25 H 1.08998 * 110.48744 * 336.91039 * 7 5 4 26 26 H 1.08996 * 110.75388 * 156.31523 * 8 7 5 27 27 H 1.08993 * 110.76071 * 279.69749 * 8 7 5 28 28 H 0.97003 * 120.00123 * 179.97438 * 14 13 11 29 29 H 1.08999 * 110.04012 * 359.97438 * 19 5 4 30 30 H 1.09006 * 110.02998 * 121.36690 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0503 0.0000 4 7 2.1809 -1.1672 0.0005 5 6 3.6459 -1.1672 0.0011 6 1 4.0192 -0.3277 -0.5854 7 6 4.1738 -1.0772 1.4478 8 6 4.4437 -2.5488 1.8491 9 6 5.0047 -3.1597 0.5369 10 1 6.0611 -2.9158 0.4240 11 6 4.8047 -4.6533 0.5201 12 1 4.1493 -5.1021 -0.2115 13 6 5.4587 -5.4467 1.4386 14 7 6.2567 -4.9001 2.3298 15 14 5.2114 -7.2981 1.4174 16 1 6.2238 -7.9227 0.5286 17 1 5.3635 -7.8337 2.7941 18 1 3.8500 -7.6099 0.9126 19 6 4.1742 -2.4912 -0.5781 20 1 -0.3634 -0.5138 0.8900 21 1 -0.3633 1.0277 -0.0005 22 1 -0.3633 -0.5138 -0.8900 23 1 1.6959 -2.0072 0.0005 24 1 5.0959 -0.4971 1.4821 25 1 3.4217 -0.6354 2.1015 26 1 5.1820 -2.6017 2.6492 27 1 3.5187 -3.0453 2.1419 28 1 6.7165 -5.4583 2.9762 29 1 3.3407 -3.1347 -0.8595 30 1 4.8034 -2.2943 -1.4462 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261035940.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:36:58 Heat of formation + Delta-G solvation = -61.736756 kcal Electronic energy + Delta-G solvation = -12622.389565 eV Core-core repulsion = 10416.529969 eV Total energy + Delta-G solvation = -2205.859597 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -39.43923 -36.99057 -33.52127 -32.02758 -29.69507 -28.13778 -26.66912 -23.79654 -20.70905 -19.43695 -19.05903 -16.62096 -16.49307 -15.45864 -14.97776 -14.59848 -14.09560 -13.45258 -12.76273 -12.53411 -12.42212 -12.09806 -11.68711 -11.01945 -10.98053 -10.83805 -10.56981 -10.41023 -9.95635 -9.58671 -9.49797 -9.21858 -8.82980 -8.55736 -8.36446 -6.02472 -4.05794 2.92529 3.28554 3.35806 3.37622 3.64910 4.41955 5.03377 5.28854 5.32722 5.41549 5.59722 5.68439 5.83734 5.87827 6.33852 6.35948 6.62195 6.64798 6.76434 6.94360 6.94870 7.25844 7.34179 7.68724 7.84232 7.91377 8.01456 8.41772 8.56141 8.96946 9.58345 11.07018 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.060807 B = 0.008432 C = 0.007988 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 460.359427 B = 3319.698557 C = 3504.632992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.503 3.497 3 O -0.558 6.558 4 N -0.715 5.715 5 C 0.138 3.862 6 H 0.074 0.926 7 C -0.136 4.136 8 C -0.099 4.099 9 C 0.048 3.952 10 H 0.033 0.967 11 C -0.515 4.515 12 H 0.055 0.945 13 C 0.062 3.938 14 N -0.888 5.888 15 Si 0.889 3.111 16 H -0.281 1.281 17 H -0.287 1.287 18 H -0.275 1.275 19 C -0.122 4.122 20 H 0.085 0.915 21 H 0.086 0.914 22 H 0.084 0.916 23 H 0.400 0.600 24 H 0.060 0.940 25 H 0.049 0.951 26 H 0.066 0.934 27 H 0.046 0.954 28 H 0.260 0.740 29 H 0.061 0.939 30 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.780 4.489 -3.138 10.348 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.290 3.710 3 O -0.437 6.437 4 N -0.366 5.366 5 C 0.034 3.966 6 H 0.092 0.908 7 C -0.175 4.175 8 C -0.137 4.137 9 C 0.029 3.971 10 H 0.051 0.949 11 C -0.553 4.553 12 H 0.073 0.927 13 C -0.139 4.139 14 N -0.527 5.527 15 Si 0.717 3.283 16 H -0.207 1.207 17 H -0.213 1.213 18 H -0.200 1.200 19 C -0.160 4.160 20 H 0.104 0.896 21 H 0.105 0.895 22 H 0.103 0.897 23 H 0.234 0.766 24 H 0.079 0.921 25 H 0.068 0.932 26 H 0.085 0.915 27 H 0.065 0.935 28 H 0.069 0.931 29 H 0.080 0.920 30 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -8.217 5.190 -2.993 10.169 hybrid contribution -0.336 -1.501 0.113 1.543 sum -8.553 3.689 -2.880 9.750 Atomic orbital electron populations 1.21915 0.92533 1.04927 1.04021 1.20756 0.90361 0.83939 0.75932 1.90684 1.70962 1.31585 1.50514 1.46359 1.08024 1.08244 1.73988 1.21764 0.78215 0.99230 0.97425 0.90784 1.22837 0.99592 0.99939 0.95085 1.22508 0.99987 0.90550 1.00681 1.19525 0.94541 0.94149 0.88871 0.94923 1.21172 1.27231 0.91351 1.15560 0.92710 1.24986 0.95055 0.98361 0.95535 1.69961 1.29220 1.35150 1.18334 0.86652 0.78480 0.85977 0.77196 1.20735 1.21299 1.19990 1.22601 1.00048 0.93667 0.99711 0.89606 0.89461 0.89726 0.76552 0.92105 0.93246 0.91509 0.93519 0.93051 0.92043 0.92852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.79 10.32 36.00 0.37 -1.42 16 2 C 0.50 7.84 7.93 -10.99 -0.09 7.76 16 3 O -0.56 -11.09 16.76 5.55 0.09 -11.00 16 4 N -0.72 -11.21 5.04 -52.73 -0.27 -11.47 16 5 C 0.14 2.54 3.22 -66.82 -0.22 2.33 16 6 H 0.07 1.41 7.61 -51.93 -0.39 1.02 16 7 C -0.14 -2.69 6.52 -25.07 -0.16 -2.86 16 8 C -0.10 -2.27 5.77 -24.55 -0.14 -2.41 16 9 C 0.05 1.15 2.72 -89.92 -0.24 0.91 16 10 H 0.03 0.87 8.14 -51.93 -0.42 0.44 16 11 C -0.51 -13.69 8.47 -34.44 -0.29 -13.98 16 12 H 0.05 1.42 7.54 -52.49 -0.40 1.03 16 13 C 0.06 1.70 5.35 -17.82 -0.10 1.60 16 14 N -0.89 -25.24 12.30 55.43 0.68 -24.56 16 15 Si 0.89 20.86 29.54 -169.99 -5.02 15.84 16 16 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 17 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 18 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 19 C -0.12 -2.42 6.13 -25.62 -0.16 -2.58 16 20 H 0.09 0.74 8.14 -51.93 -0.42 0.32 16 21 H 0.09 0.87 8.12 -51.93 -0.42 0.45 16 22 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 23 H 0.40 5.42 8.30 -40.82 -0.34 5.09 16 24 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 25 H 0.05 0.96 8.04 -51.93 -0.42 0.54 16 26 H 0.07 1.68 7.57 -51.93 -0.39 1.28 16 27 H 0.05 1.08 8.06 -51.93 -0.42 0.66 16 28 H 0.26 7.06 8.31 -40.82 -0.34 6.72 16 29 H 0.06 1.17 7.12 -51.93 -0.37 0.80 16 30 H 0.05 1.01 8.14 -51.93 -0.42 0.58 16 LS Contribution 252.78 15.07 3.81 3.81 Total: -1.00 -30.36 252.78 -6.13 -36.49 By element: Atomic # 1 Polarization: 5.94 SS G_CDS: -4.40 Total: 1.54 kcal Atomic # 6 Polarization: -9.62 SS G_CDS: -1.02 Total: -10.64 kcal Atomic # 7 Polarization: -36.45 SS G_CDS: 0.42 Total: -36.04 kcal Atomic # 8 Polarization: -11.09 SS G_CDS: 0.09 Total: -11.00 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -5.02 Total: 15.84 kcal Total LS contribution 3.81 Total: 3.81 kcal Total: -30.36 -6.13 -36.49 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261035940.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.248 kcal (2) G-P(sol) polarization free energy of solvation -30.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds