Wall clock time and date at job start Mon Mar 30 2020 02:04:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53002 * 109.46871 * 2 1 4 4 H 1.09004 * 115.55162 * 330.67004 * 3 2 1 5 5 C 1.52998 * 117.49740 * 116.37765 * 3 2 1 6 6 C 1.52996 * 117.49836 * 184.99933 * 3 2 1 7 7 H 1.09002 * 117.50209 * 145.00025 * 6 3 2 8 8 C 1.50709 * 117.49928 * 0.02562 * 6 3 2 9 9 O 1.21293 * 119.99850 * 359.71972 * 8 6 3 10 10 N 1.34768 * 119.99967 * 179.97438 * 8 6 3 11 11 C 1.46507 * 120.00361 * 0.02562 * 10 8 6 12 12 C 1.37103 * 120.00063 * 179.97438 * 10 8 6 13 13 H 1.08000 * 119.99825 * 21.61830 * 12 10 8 14 14 C 1.38947 * 120.00422 * 201.61614 * 12 10 8 15 15 N 1.31418 * 119.99884 * 15.83337 * 14 12 10 16 16 Si 1.86798 * 120.00159 * 195.83751 * 14 12 10 17 17 H 1.48505 * 109.46877 * 0.02562 * 16 14 12 18 18 H 1.48501 * 109.47346 * 119.99510 * 16 14 12 19 19 H 1.48502 * 109.47310 * 239.99993 * 16 14 12 20 20 H 1.09008 * 109.47210 * 59.99862 * 1 2 3 21 21 H 1.09002 * 109.46939 * 180.02562 * 1 2 3 22 22 H 1.08996 * 109.47226 * 299.99944 * 1 2 3 23 23 H 1.09004 * 109.47086 * 240.00386 * 2 1 3 24 24 H 1.08994 * 109.47175 * 119.99926 * 2 1 3 25 25 H 1.09002 * 117.49838 * 0.02562 * 5 3 2 26 26 H 1.08998 * 117.50116 * 214.97821 * 5 3 2 27 27 H 1.09006 * 109.46874 * 87.61403 * 11 10 8 28 28 H 1.08997 * 109.46793 * 207.60967 * 11 10 8 29 29 H 1.08991 * 109.46680 * 327.61561 * 11 10 8 30 30 H 0.96996 * 119.99618 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.3883 2.1716 -0.4817 5 6 2.8438 1.9076 1.2158 6 6 3.5500 1.6580 -0.1183 7 1 3.8919 2.5287 -0.6777 8 6 4.4213 0.4330 -0.2264 9 8 3.9196 -0.6712 -0.2126 10 7 5.7583 0.5645 -0.3334 11 6 6.3648 1.8980 -0.3440 12 6 6.5510 -0.5499 -0.4313 13 1 6.1290 -1.4848 -0.7693 14 6 7.8974 -0.4765 -0.0958 15 7 8.3466 0.5445 0.5992 16 14 9.0688 -1.8288 -0.6326 17 1 8.3198 -2.8575 -1.3981 18 1 10.1325 -1.2500 -1.4922 19 1 9.6856 -2.4538 0.5650 20 1 -0.3634 0.5139 -0.8900 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3633 0.5138 0.8899 23 1 1.8933 -0.5138 -0.8900 24 1 1.8933 -0.5138 0.8899 25 1 3.0098 1.1857 2.0155 26 1 2.7212 2.9427 1.5344 27 1 6.5613 2.2159 0.6800 28 1 7.3014 1.8667 -0.9007 29 1 5.6831 2.6034 -0.8190 30 1 9.2864 0.5955 0.8337 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000387644649.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:04:30 Heat of formation + Delta-G solvation = -10.586152 kcal Electronic energy + Delta-G solvation = -12742.811662 eV Core-core repulsion = 10539.170122 eV Total energy + Delta-G solvation = -2203.641540 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.01700 -36.29795 -34.35439 -31.82705 -31.21137 -26.44779 -24.95043 -23.34585 -22.59945 -20.23390 -18.16083 -16.83556 -16.22392 -14.73748 -14.45608 -14.11732 -13.71144 -13.45511 -13.14668 -12.33841 -11.79562 -11.66235 -11.53779 -11.29236 -11.10556 -10.92762 -10.77113 -10.55412 -10.28688 -10.23186 -9.57633 -9.31433 -8.96583 -8.12326 -7.61004 -6.29119 -3.81309 3.16225 3.27241 3.34509 3.73266 4.15060 4.48747 4.88932 5.14074 5.17470 5.54340 5.61230 5.63236 5.75723 5.91470 5.93097 6.11176 6.22930 6.38189 6.44126 6.54362 6.58543 6.79435 6.92303 7.15219 7.24904 7.60826 8.19389 8.54831 9.24703 9.49728 10.08147 10.75906 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.059187 B = 0.009508 C = 0.008524 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 472.967179 B = 2944.278681 C = 3283.913543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.080 4.080 3 C -0.126 4.126 4 H 0.099 0.901 5 C -0.158 4.158 6 C -0.172 4.172 7 H 0.109 0.891 8 C 0.474 3.526 9 O -0.584 6.584 10 N -0.445 5.445 11 C 0.114 3.886 12 C -0.305 4.305 13 H 0.099 0.901 14 C 0.028 3.972 15 N -0.881 5.881 16 Si 0.923 3.077 17 H -0.268 1.268 18 H -0.281 1.281 19 H -0.282 1.282 20 H 0.046 0.954 21 H 0.048 0.952 22 H 0.046 0.954 23 H 0.079 0.921 24 H 0.068 0.932 25 H 0.094 0.906 26 H 0.091 0.909 27 H 0.052 0.948 28 H 0.070 0.930 29 H 0.027 0.973 30 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.162 4.284 -0.925 8.397 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.117 4.117 3 C -0.145 4.145 4 H 0.117 0.883 5 C -0.196 4.196 6 C -0.193 4.193 7 H 0.127 0.873 8 C 0.263 3.737 9 O -0.470 6.470 10 N -0.163 5.163 11 C -0.030 4.030 12 C -0.433 4.433 13 H 0.117 0.883 14 C -0.174 4.174 15 N -0.520 5.520 16 Si 0.750 3.250 17 H -0.192 1.192 18 H -0.207 1.207 19 H -0.208 1.208 20 H 0.065 0.935 21 H 0.068 0.932 22 H 0.065 0.935 23 H 0.097 0.903 24 H 0.086 0.914 25 H 0.113 0.887 26 H 0.110 0.890 27 H 0.070 0.930 28 H 0.089 0.911 29 H 0.045 0.955 30 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -7.174 3.798 -0.855 8.162 hybrid contribution 0.922 -0.259 -0.132 0.967 sum -6.251 3.539 -0.986 7.251 Atomic orbital electron populations 1.21867 0.97447 1.00811 1.00694 1.21085 0.92743 0.93617 1.04286 1.22320 0.92061 0.98661 1.01416 0.88308 1.22952 1.03626 1.01598 0.91388 1.22299 0.94610 1.00048 1.02390 0.87346 1.19165 0.82749 0.88637 0.83182 1.90490 1.73163 1.27201 1.56104 1.43558 1.04222 1.06420 1.62104 1.21465 0.97066 0.83061 1.01394 1.19704 0.90219 0.91093 1.42294 0.88317 1.25313 0.98240 0.98168 0.95717 1.70043 1.15601 1.31166 1.35239 0.85908 0.79859 0.80726 0.78478 1.19237 1.20680 1.20808 0.93497 0.93249 0.93476 0.90273 0.91373 0.88736 0.89044 0.92983 0.91128 0.95489 0.92389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.09 9.87 37.16 0.37 -1.72 16 2 C -0.08 -1.43 4.47 -26.73 -0.12 -1.55 16 3 C -0.13 -2.12 5.74 -90.62 -0.52 -2.64 16 4 H 0.10 1.41 8.07 -51.93 -0.42 0.99 16 5 C -0.16 -2.67 9.88 -26.73 -0.26 -2.94 16 6 C -0.17 -3.35 5.29 -91.77 -0.49 -3.84 16 7 H 0.11 1.90 6.47 -51.93 -0.34 1.57 16 8 C 0.47 11.88 7.39 -10.98 -0.08 11.80 16 9 O -0.58 -16.09 12.79 5.55 0.07 -16.02 16 10 N -0.44 -11.78 3.02 -122.19 -0.37 -12.15 16 11 C 0.11 2.64 8.50 59.85 0.51 3.14 16 12 C -0.31 -8.72 9.28 -14.93 -0.14 -8.86 16 13 H 0.10 2.95 7.42 -52.49 -0.39 2.56 16 14 C 0.03 0.77 4.99 -17.47 -0.09 0.68 16 15 N -0.88 -24.03 10.84 55.50 0.60 -23.43 16 16 Si 0.92 21.08 29.58 -169.99 -5.03 16.05 16 17 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 18 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 19 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 20 H 0.05 0.59 8.14 -51.92 -0.42 0.16 16 21 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 22 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 23 H 0.08 1.61 6.93 -51.93 -0.36 1.25 16 24 H 0.07 1.36 7.29 -51.93 -0.38 0.98 16 25 H 0.09 1.73 8.03 -51.93 -0.42 1.32 16 26 H 0.09 1.28 8.14 -51.93 -0.42 0.86 16 27 H 0.05 1.24 7.79 -51.93 -0.40 0.83 16 28 H 0.07 1.71 6.81 -51.93 -0.35 1.35 16 29 H 0.03 0.52 6.10 -51.93 -0.32 0.20 16 30 H 0.27 6.83 8.31 -40.82 -0.34 6.49 16 LS Contribution 248.76 15.07 3.75 3.75 Total: -1.00 -30.33 248.76 -6.00 -36.32 By element: Atomic # 1 Polarization: 5.59 SS G_CDS: -4.20 Total: 1.39 kcal Atomic # 6 Polarization: -5.09 SS G_CDS: -0.82 Total: -5.91 kcal Atomic # 7 Polarization: -35.82 SS G_CDS: 0.23 Total: -35.58 kcal Atomic # 8 Polarization: -16.09 SS G_CDS: 0.07 Total: -16.02 kcal Atomic # 14 Polarization: 21.08 SS G_CDS: -5.03 Total: 16.05 kcal Total LS contribution 3.75 Total: 3.75 kcal Total: -30.33 -6.00 -36.32 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000387644649.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.737 kcal (2) G-P(sol) polarization free energy of solvation -30.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds