Wall clock time and date at job start Mon Mar 30 2020 02:10:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31002 * 1 3 3 C 1.50701 * 119.99728 * 2 1 4 4 N 1.46502 * 109.47047 * 120.99115 * 3 2 1 5 5 C 1.36931 * 120.00347 * 93.64296 * 4 3 2 6 6 H 1.07997 * 120.00034 * 219.68878 * 5 4 3 7 7 C 1.38807 * 119.99985 * 39.40678 * 5 4 3 8 8 N 1.31613 * 120.00588 * 211.39737 * 7 5 4 9 9 Si 1.86804 * 119.99809 * 31.40260 * 7 5 4 10 10 H 1.48502 * 109.46966 * 95.13885 * 9 7 5 11 11 H 1.48501 * 109.47401 * 215.14225 * 9 7 5 12 12 H 1.48502 * 109.47189 * 335.14055 * 9 7 5 13 13 C 1.46502 * 119.99717 * 273.64364 * 4 3 2 14 14 H 1.09004 * 110.45497 * 0.69726 * 13 4 3 15 15 C 1.54516 * 110.50938 * 238.09671 * 13 4 3 16 16 C 1.54475 * 104.05935 * 241.35606 * 15 13 4 17 17 O 1.44425 * 104.80666 * 23.97749 * 16 15 13 18 18 C 1.44788 * 105.29311 * 319.45303 * 17 16 15 19 19 H 1.08005 * 119.99973 * 180.02562 * 1 2 3 20 20 H 1.08003 * 120.00368 * 359.97438 * 1 2 3 21 21 H 1.07991 * 119.99766 * 179.97438 * 2 1 3 22 22 H 1.08999 * 109.47184 * 0.98532 * 3 2 1 23 23 H 1.09003 * 109.46851 * 240.98751 * 3 2 1 24 24 H 0.97000 * 120.00776 * 179.97438 * 8 7 5 25 25 H 1.08996 * 110.50669 * 359.97438 * 15 13 4 26 26 H 1.08998 * 110.51114 * 122.70669 * 15 13 4 27 27 H 1.09000 * 110.36986 * 142.81190 * 16 15 13 28 28 H 1.09006 * 110.36842 * 265.03319 * 16 15 13 29 29 H 1.09003 * 110.42430 * 281.77354 * 18 17 16 30 30 H 1.09001 * 110.48623 * 159.32707 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9236 1.3725 1.1841 5 6 4.2284 0.9647 1.1066 6 1 4.6707 0.4118 1.9220 7 6 4.9810 1.2571 -0.0225 8 7 5.9296 0.4324 -0.4129 9 14 4.6476 2.8211 -0.9880 10 1 5.5720 3.8904 -0.5328 11 1 4.8615 2.5647 -2.4350 12 1 3.2441 3.2515 -0.7638 13 6 2.3875 1.8761 2.4511 14 1 1.3367 2.1439 2.3405 15 6 3.2071 3.0908 2.9410 16 6 3.7846 2.6311 4.2980 17 8 3.8035 1.1890 4.2216 18 6 2.5633 0.8249 3.5692 19 1 -0.5400 -0.9354 0.0004 20 1 -0.5401 0.9353 0.0004 21 1 1.8499 -0.9353 0.0004 22 1 1.3553 2.1335 0.0177 23 1 2.6768 1.3706 -0.8987 24 1 6.4553 0.6365 -1.2021 25 1 4.0114 3.3163 2.2408 26 1 2.5612 3.9585 3.0750 27 1 4.7952 3.0174 4.4307 28 1 3.1427 2.9612 5.1149 29 1 1.7332 0.8776 4.2736 30 1 2.6365 -0.1751 3.1418 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000388444072.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:10:59 Heat of formation + Delta-G solvation = 3.506659 kcal Electronic energy + Delta-G solvation = -13170.565750 eV Core-core repulsion = 10967.535320 eV Total energy + Delta-G solvation = -2203.030430 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 197.116 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -38.71845 -35.78610 -32.75289 -31.69642 -29.81124 -27.94434 -25.44158 -23.18849 -21.82702 -19.57044 -19.34888 -16.64654 -15.82394 -15.38416 -14.87404 -14.47431 -14.12990 -13.56372 -12.97019 -12.81690 -12.33061 -11.89442 -11.29036 -10.97517 -10.82284 -10.70556 -10.63005 -10.37762 -10.11783 -9.94592 -9.66198 -9.16473 -8.68785 -8.41521 -6.76979 -6.04000 -3.37444 2.91158 3.35982 3.47834 3.51123 4.54723 4.70785 4.96364 5.25129 5.49876 5.64454 5.70464 5.76501 5.89155 5.92885 6.07241 6.19285 6.22183 6.33933 6.44523 6.59320 6.64830 6.80829 6.95190 7.26199 7.40842 7.54042 8.05935 8.50990 9.04147 9.73905 10.14813 11.11625 Molecular weight = 197.12amu Principal moments of inertia in cm(-1) A = 0.024904 B = 0.018931 C = 0.013561 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1124.034356 B = 1478.666583 C = 2064.216118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C -0.133 4.133 3 C 0.168 3.832 4 N -0.588 5.588 5 C -0.268 4.268 6 H 0.086 0.914 7 C 0.046 3.954 8 N -0.882 5.882 9 Si 0.846 3.154 10 H -0.290 1.290 11 H -0.295 1.295 12 H -0.262 1.262 13 C 0.145 3.855 14 H 0.064 0.936 15 C -0.167 4.167 16 C 0.052 3.948 17 O -0.369 6.369 18 C 0.038 3.962 19 H 0.084 0.916 20 H 0.085 0.915 21 H 0.106 0.894 22 H 0.040 0.960 23 H 0.064 0.936 24 H 0.263 0.737 25 H 0.087 0.913 26 H 0.058 0.942 27 H 0.080 0.920 28 H 0.042 0.958 29 H 0.041 0.959 30 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.490 3.762 4.136 10.166 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.271 4.271 2 C -0.153 4.153 3 C 0.043 3.957 4 N -0.309 5.309 5 C -0.396 4.396 6 H 0.103 0.897 7 C -0.155 4.155 8 N -0.522 5.522 9 Si 0.673 3.327 10 H -0.218 1.218 11 H -0.221 1.221 12 H -0.187 1.187 13 C 0.037 3.963 14 H 0.082 0.918 15 C -0.207 4.207 16 C -0.025 4.025 17 O -0.288 6.288 18 C -0.041 4.041 19 H 0.103 0.897 20 H 0.104 0.896 21 H 0.124 0.876 22 H 0.058 0.942 23 H 0.082 0.918 24 H 0.072 0.928 25 H 0.106 0.894 26 H 0.077 0.923 27 H 0.098 0.902 28 H 0.061 0.939 29 H 0.059 0.941 30 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -8.150 3.572 4.082 9.790 hybrid contribution -0.183 1.044 -0.729 1.287 sum -8.333 4.616 3.352 10.099 Atomic orbital electron populations 1.23581 0.95992 1.00410 1.07077 1.24016 0.95636 1.01499 0.94183 1.20428 0.92401 0.91634 0.91284 1.44174 1.08418 1.73254 1.05041 1.18726 0.85938 1.29887 1.05030 0.89674 1.25523 0.95640 0.97072 0.97303 1.70016 1.24067 1.33852 1.24216 0.87383 0.78819 0.87637 0.78891 1.21788 1.22137 1.18692 1.21768 0.95440 0.91246 0.87847 0.91757 1.23377 1.01201 0.98430 0.97654 1.23187 1.00632 0.82648 0.96064 1.89171 1.39491 1.19990 1.80103 1.23916 0.85724 1.01118 0.93319 0.89740 0.89637 0.87567 0.94185 0.91817 0.92759 0.89418 0.92343 0.90183 0.93940 0.94074 0.88936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -3.74 14.32 29.01 0.42 -3.32 16 2 C -0.13 -2.54 9.85 -36.03 -0.35 -2.90 16 3 C 0.17 3.58 4.31 -5.19 -0.02 3.55 16 4 N -0.59 -13.53 1.94 -165.24 -0.32 -13.85 16 5 C -0.27 -7.27 8.31 -15.06 -0.13 -7.40 16 6 H 0.09 2.59 7.26 -52.49 -0.38 2.21 16 7 C 0.05 1.31 5.05 -17.43 -0.09 1.22 16 8 N -0.88 -26.54 13.97 55.49 0.78 -25.77 16 9 Si 0.85 21.12 26.31 -169.99 -4.47 16.65 16 10 H -0.29 -7.39 7.11 56.52 0.40 -6.99 16 11 H -0.29 -7.46 7.11 56.52 0.40 -7.06 16 12 H -0.26 -6.19 5.85 56.52 0.33 -5.86 16 13 C 0.14 2.84 3.64 -66.36 -0.24 2.60 16 14 H 0.06 1.13 7.91 -51.93 -0.41 0.72 16 15 C -0.17 -3.10 6.55 -25.16 -0.16 -3.27 16 16 C 0.05 0.91 7.63 37.93 0.29 1.20 16 17 O -0.37 -7.75 11.08 -35.23 -0.39 -8.14 16 18 C 0.04 0.72 6.64 37.93 0.25 0.98 16 19 H 0.08 1.22 8.06 -52.48 -0.42 0.79 16 20 H 0.09 1.27 7.83 -52.48 -0.41 0.86 16 21 H 0.11 2.16 8.06 -52.49 -0.42 1.74 16 22 H 0.04 0.78 7.67 -51.93 -0.40 0.38 16 23 H 0.06 1.48 4.64 -51.93 -0.24 1.24 16 24 H 0.26 7.50 8.31 -40.82 -0.34 7.16 16 25 H 0.09 1.89 7.39 -51.93 -0.38 1.51 16 26 H 0.06 0.91 8.14 -51.93 -0.42 0.49 16 27 H 0.08 1.35 8.14 -51.93 -0.42 0.92 16 28 H 0.04 0.63 8.14 -51.93 -0.42 0.20 16 29 H 0.04 0.67 8.14 -51.93 -0.42 0.24 16 30 H 0.09 1.92 8.01 -51.93 -0.42 1.51 16 LS Contribution 247.37 15.07 3.73 3.73 Total: -1.00 -29.53 247.37 -5.10 -34.63 By element: Atomic # 1 Polarization: 4.46 SS G_CDS: -4.38 Total: 0.08 kcal Atomic # 6 Polarization: -7.29 SS G_CDS: -0.04 Total: -7.34 kcal Atomic # 7 Polarization: -40.07 SS G_CDS: 0.45 Total: -39.61 kcal Atomic # 8 Polarization: -7.75 SS G_CDS: -0.39 Total: -8.14 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -4.47 Total: 16.65 kcal Total LS contribution 3.73 Total: 3.73 kcal Total: -29.53 -5.10 -34.63 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000388444072.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.139 kcal (2) G-P(sol) polarization free energy of solvation -29.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.633 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds