Wall clock time and date at job start Mon Mar 30 2020 01:57:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53007 * 109.47203 * 2 1 4 4 C 1.52997 * 110.06567 * 299.93497 * 3 2 1 5 5 C 1.53997 * 109.91769 * 61.13800 * 3 2 1 6 6 H 1.09005 * 110.30703 * 359.21400 * 5 3 2 7 7 C 1.50697 * 110.30670 * 237.04609 * 5 3 2 8 8 H 1.07998 * 120.00824 * 2.83084 * 7 5 3 9 9 C 1.37887 * 119.99597 * 182.82591 * 7 5 3 10 10 N 1.31511 * 119.99827 * 179.97438 * 9 7 5 11 11 Si 1.86799 * 120.00126 * 0.02562 * 9 7 5 12 12 H 1.48498 * 109.47049 * 89.99510 * 11 9 7 13 13 H 1.48500 * 109.46951 * 209.99799 * 11 9 7 14 14 H 1.48505 * 109.46804 * 329.99653 * 11 9 7 15 15 C 1.54589 * 105.13967 * 118.12582 * 5 3 2 16 16 C 1.54934 * 102.92175 * 338.04673 * 15 5 3 17 17 N 1.47894 * 109.91823 * 178.72712 * 3 2 1 18 18 C 1.46907 * 111.00038 * 26.49311 * 17 3 2 19 19 H 1.08998 * 109.46820 * 305.92244 * 1 2 3 20 20 H 1.08995 * 109.46976 * 65.92117 * 1 2 3 21 21 H 1.08992 * 109.46784 * 185.92423 * 1 2 3 22 22 H 1.08999 * 109.47266 * 240.00035 * 2 1 3 23 23 H 1.08998 * 109.47150 * 119.99637 * 2 1 3 24 24 H 1.09007 * 109.46980 * 300.24927 * 4 3 2 25 25 H 1.09002 * 109.47209 * 60.24543 * 4 3 2 26 26 H 1.09002 * 109.47283 * 180.24727 * 4 3 2 27 27 H 0.96998 * 120.00235 * 180.02562 * 10 9 7 28 28 H 1.09003 * 110.72624 * 219.68106 * 15 5 3 29 29 H 1.09010 * 110.72073 * 96.40403 * 15 5 3 30 30 H 1.08996 * 110.66545 * 278.97203 * 16 15 5 31 31 H 1.09002 * 110.81100 * 155.91676 * 16 15 5 32 32 H 1.09001 * 109.46948 * 296.26764 * 18 17 3 33 33 H 1.09000 * 109.46869 * 176.27458 * 18 17 3 34 34 H 1.08994 * 109.46915 * 56.27223 * 18 17 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4426 0.0000 4 6 1.5389 2.1765 -1.2454 5 6 1.5560 2.1701 1.2680 6 1 0.9467 1.5029 1.8777 7 6 0.7726 3.4028 0.8968 8 1 0.5862 3.6318 -0.1420 9 6 0.2935 4.2382 1.8836 10 7 -0.3898 5.3142 1.5597 11 14 0.6163 3.8425 3.6805 12 1 1.8892 4.4777 4.1063 13 1 -0.4993 4.3642 4.5103 14 1 0.7154 2.3708 3.8531 15 6 2.8453 2.5617 2.0258 16 6 3.8929 1.5681 1.4637 17 7 3.5186 1.4542 0.0309 18 6 4.0673 0.2264 -0.5605 19 1 -0.3633 0.6029 0.8322 20 1 -0.3633 0.4193 -0.9382 21 1 -0.3632 -1.0221 0.1061 22 1 1.8934 -0.5138 -0.8900 23 1 1.8934 -0.5138 0.8900 24 1 1.8996 1.6654 -2.1381 25 1 0.4490 2.1860 -1.2476 26 1 1.9112 3.2010 -1.2378 27 1 -0.7265 5.9021 2.2539 28 1 2.7190 2.4227 3.0995 29 1 3.1285 3.5898 1.7997 30 1 3.8116 0.6015 1.9607 31 1 4.9012 1.9688 1.5673 32 1 3.7670 -0.6320 0.0405 33 1 5.1551 0.2898 -0.5853 34 1 3.6868 0.1105 -1.5753 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261152637.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:57:58 Heat of formation + Delta-G solvation = 9.395758 kcal Electronic energy + Delta-G solvation = -13795.466627 eV Core-core repulsion = 11728.524662 eV Total energy + Delta-G solvation = -2066.941965 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 197.148 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -39.35852 -33.30427 -32.92570 -31.08522 -28.99260 -26.37421 -24.49213 -23.73056 -22.02506 -20.37196 -17.47704 -16.50849 -15.27712 -14.82468 -14.45317 -13.88161 -13.73205 -12.96149 -12.72347 -12.43668 -12.06075 -11.50595 -11.39048 -11.20150 -11.08025 -10.79888 -10.55844 -10.47690 -10.25318 -10.02073 -9.88962 -9.56603 -9.19026 -8.69075 -8.48674 -7.72892 -5.98886 -3.96548 3.32107 3.41052 3.41316 4.47682 4.62990 5.28867 5.42330 5.45880 5.62094 5.71455 5.77043 5.88580 5.95078 6.08562 6.13043 6.26778 6.27922 6.34533 6.43230 6.46175 6.65934 6.79189 6.81945 6.89516 7.05150 7.07640 7.30411 7.40584 7.72764 7.82950 7.86671 8.61772 9.06807 9.64038 11.12996 Molecular weight = 197.15amu Principal moments of inertia in cm(-1) A = 0.037869 B = 0.015156 C = 0.013456 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 739.209568 B = 1846.960010 C = 2080.303274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.134 4.134 3 C 0.104 3.896 4 C -0.107 4.107 5 C 0.016 3.984 6 H 0.033 0.967 7 C -0.508 4.508 8 H 0.095 0.905 9 C 0.071 3.929 10 N -0.903 5.903 11 Si 0.872 3.128 12 H -0.278 1.278 13 H -0.296 1.296 14 H -0.268 1.268 15 C -0.134 4.134 16 C 0.037 3.963 17 N -0.512 5.512 18 C 0.017 3.983 19 H 0.070 0.930 20 H 0.056 0.944 21 H 0.038 0.962 22 H 0.054 0.946 23 H 0.048 0.952 24 H 0.020 0.980 25 H 0.064 0.936 26 H 0.069 0.931 27 H 0.261 0.739 28 H 0.046 0.954 29 H 0.077 0.923 30 H 0.030 0.970 31 H 0.067 0.933 32 H 0.024 0.976 33 H 0.056 0.944 34 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.393 -9.478 -1.403 10.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.173 4.173 3 C 0.015 3.985 4 C -0.164 4.164 5 C -0.003 4.003 6 H 0.051 0.949 7 C -0.546 4.546 8 H 0.112 0.888 9 C -0.129 4.129 10 N -0.542 5.542 11 Si 0.701 3.299 12 H -0.204 1.204 13 H -0.223 1.223 14 H -0.193 1.193 15 C -0.172 4.172 16 C -0.091 4.091 17 N -0.235 5.235 18 C -0.132 4.132 19 H 0.089 0.911 20 H 0.075 0.925 21 H 0.057 0.943 22 H 0.072 0.928 23 H 0.067 0.933 24 H 0.039 0.961 25 H 0.082 0.918 26 H 0.088 0.912 27 H 0.071 0.929 28 H 0.065 0.935 29 H 0.096 0.904 30 H 0.049 0.951 31 H 0.086 0.914 32 H 0.043 0.957 33 H 0.075 0.925 34 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 5.521 -8.882 -1.648 10.587 hybrid contribution -0.057 -0.878 1.620 1.843 sum 5.463 -9.760 -0.028 11.185 Atomic orbital electron populations 1.21792 0.95341 1.00148 1.03305 1.22109 0.97054 0.97996 1.00145 1.21774 0.85409 0.92822 0.98470 1.21705 1.00544 1.00576 0.93576 1.20063 0.92647 0.96479 0.91154 0.94921 1.21414 1.31982 1.05105 0.96071 0.88770 1.24985 0.94806 0.94880 0.98273 1.69886 1.37449 1.13784 1.33088 0.87049 0.77467 0.78902 0.86456 1.20431 1.22294 1.19330 1.22997 0.96819 0.99570 0.97792 1.23166 0.99288 0.97963 0.88677 1.64818 1.09400 1.34187 1.15069 1.22483 0.99473 0.91668 0.99584 0.91109 0.92487 0.94300 0.92751 0.93315 0.96052 0.91750 0.91227 0.92863 0.93536 0.90444 0.95140 0.91427 0.95747 0.92550 0.91894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.53 9.23 37.16 0.34 -2.19 16 2 C -0.13 -2.33 3.60 -26.73 -0.10 -2.43 16 3 C 0.10 2.08 0.64 -130.53 -0.08 2.00 16 4 C -0.11 -2.17 6.97 37.16 0.26 -1.91 16 5 C 0.02 0.37 1.47 -90.42 -0.13 0.23 16 6 H 0.03 0.78 5.56 -51.93 -0.29 0.49 16 7 C -0.51 -13.71 8.11 -34.44 -0.28 -13.99 16 8 H 0.09 2.69 4.95 -52.49 -0.26 2.43 16 9 C 0.07 2.02 5.46 -17.82 -0.10 1.92 16 10 N -0.90 -27.31 13.96 55.43 0.77 -26.54 16 11 Si 0.87 21.69 24.70 -169.99 -4.20 17.50 16 12 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 13 H -0.30 -7.43 7.11 56.52 0.40 -7.03 16 14 H -0.27 -6.42 6.36 56.52 0.36 -6.06 16 15 C -0.13 -2.92 4.75 -24.88 -0.12 -3.04 16 16 C 0.04 0.68 6.55 -1.90 -0.01 0.67 16 17 N -0.51 -9.66 5.17 -223.17 -1.15 -10.81 16 18 C 0.02 0.26 8.31 60.07 0.50 0.76 16 19 H 0.07 1.37 6.38 -51.93 -0.33 1.04 16 20 H 0.06 0.95 6.82 -51.93 -0.35 0.60 16 21 H 0.04 0.57 8.14 -51.93 -0.42 0.14 16 22 H 0.05 0.85 6.54 -51.93 -0.34 0.51 16 23 H 0.05 0.84 7.67 -51.93 -0.40 0.44 16 24 H 0.02 0.38 8.14 -51.92 -0.42 -0.05 16 25 H 0.06 1.35 5.73 -51.93 -0.30 1.05 16 26 H 0.07 1.57 7.00 -51.93 -0.36 1.21 16 27 H 0.26 7.50 8.31 -40.82 -0.34 7.16 16 28 H 0.05 1.00 5.94 -51.93 -0.31 0.69 16 29 H 0.08 1.82 7.84 -51.92 -0.41 1.41 16 30 H 0.03 0.53 7.91 -51.93 -0.41 0.12 16 31 H 0.07 1.14 8.14 -51.93 -0.42 0.72 16 32 H 0.02 0.35 6.47 -51.93 -0.34 0.02 16 33 H 0.06 0.77 8.14 -51.93 -0.42 0.35 16 34 H 0.06 0.92 7.54 -51.93 -0.39 0.52 16 LS Contribution 246.72 15.07 3.72 3.72 Total: -1.00 -28.80 246.72 -5.93 -34.73 By element: Atomic # 1 Polarization: 4.72 SS G_CDS: -5.35 Total: -0.63 kcal Atomic # 6 Polarization: -18.24 SS G_CDS: 0.28 Total: -17.96 kcal Atomic # 7 Polarization: -36.97 SS G_CDS: -0.38 Total: -37.35 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -4.20 Total: 17.50 kcal Total LS contribution 3.72 Total: 3.72 kcal Total: -28.80 -5.93 -34.73 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261152637.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.129 kcal (2) G-P(sol) polarization free energy of solvation -28.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.733 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds