Wall clock time and date at job start Mon Mar 30 2020 02:18:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46897 * 111.00255 * 2 1 4 4 C 1.46898 * 111.00162 * 123.95209 * 2 1 3 5 5 H 1.08996 * 109.47896 * 193.98385 * 4 2 1 6 6 C 1.50700 * 109.47090 * 73.97887 * 4 2 1 7 7 H 1.08003 * 120.00522 * 239.99843 * 6 4 2 8 8 C 1.37876 * 119.99835 * 60.00673 * 6 4 2 9 9 N 1.31520 * 119.99998 * 359.97438 * 8 6 4 10 10 Si 1.86799 * 120.00090 * 180.02562 * 8 6 4 11 11 H 1.48498 * 109.47431 * 89.99775 * 10 8 6 12 12 H 1.48500 * 109.47055 * 209.99966 * 10 8 6 13 13 H 1.48504 * 109.47301 * 329.99405 * 10 8 6 14 14 C 1.52998 * 109.46913 * 313.98594 * 4 2 1 15 15 C 1.54268 * 110.03150 * 292.03703 * 14 4 2 16 16 C 1.54884 * 104.20147 * 217.10480 * 15 14 4 17 17 C 1.54894 * 102.74622 * 37.94573 * 16 15 14 18 18 C 1.53882 * 110.03481 * 174.87671 * 14 4 2 19 19 H 1.08993 * 109.47170 * 296.05263 * 1 2 3 20 20 H 1.08997 * 109.47006 * 56.05144 * 1 2 3 21 21 H 1.09003 * 109.46934 * 176.04318 * 1 2 3 22 22 H 1.08998 * 109.47492 * 175.59671 * 3 2 1 23 23 H 1.09005 * 109.46836 * 295.59434 * 3 2 1 24 24 H 1.08992 * 109.47352 * 55.59143 * 3 2 1 25 25 H 0.96992 * 119.99764 * 0.02562 * 9 8 6 26 26 H 1.09000 * 110.02121 * 53.48164 * 14 4 2 27 27 H 1.08995 * 110.48768 * 335.79138 * 15 14 4 28 28 H 1.09004 * 110.48419 * 98.42849 * 15 14 4 29 29 H 1.09002 * 110.76063 * 279.63141 * 16 15 14 30 30 H 1.09002 * 110.91438 * 156.32927 * 16 15 14 31 31 H 1.09004 * 110.48674 * 203.38243 * 17 16 15 32 32 H 1.09001 * 110.59966 * 80.78773 * 17 16 15 33 33 H 1.08994 * 110.02885 * 238.56765 * 18 14 4 34 34 H 1.09000 * 110.02801 * 359.97438 * 18 14 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9954 -0.7659 1.1376 5 1 3.0566 -0.5499 1.2613 6 6 1.8094 -2.2391 0.8805 7 1 1.2141 -2.8345 1.5569 8 6 2.3993 -2.8270 -0.2184 9 7 3.1239 -2.1020 -1.0424 10 14 2.1681 -4.6529 -0.5375 11 1 0.9652 -4.8593 -1.3835 12 1 3.3633 -5.1883 -1.2376 13 1 1.9922 -5.3630 0.7548 14 6 1.2430 -0.3714 2.4100 15 6 1.5842 1.0826 2.7963 16 6 1.6383 1.0618 4.3441 17 6 2.2946 -0.3086 4.6447 18 6 1.6947 -1.2560 3.5853 19 1 -0.3633 0.4513 0.9232 20 1 -0.3633 0.5739 -0.8525 21 1 -0.3633 -1.0252 -0.0709 22 1 3.0822 1.3434 0.0789 23 1 1.7112 1.8697 -0.9269 24 1 1.5836 1.9187 0.8478 25 1 3.2436 -1.1538 -0.8768 26 1 0.1689 -0.4753 2.2557 27 1 2.5517 1.3697 2.3846 28 1 0.8049 1.7620 2.4510 29 1 0.6346 1.1103 4.7664 30 1 2.2550 1.8768 4.7229 31 1 2.0338 -0.6446 5.6483 32 1 3.3772 -0.2481 4.5330 33 1 0.8397 -1.7885 4.0019 34 1 2.4497 -1.9666 3.2490 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259479740.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:18:08 Heat of formation + Delta-G solvation = -5.917844 kcal Electronic energy + Delta-G solvation = -13632.400391 eV Core-core repulsion = 11564.794379 eV Total energy + Delta-G solvation = -2067.606013 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 197.148 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -38.68056 -35.34511 -32.28352 -29.24505 -28.09367 -26.64830 -25.40023 -23.24776 -20.37981 -20.17838 -18.70444 -16.39625 -15.66712 -14.91242 -13.94685 -13.71035 -13.55673 -13.07281 -12.83510 -12.32732 -12.00650 -11.48989 -10.90205 -10.76564 -10.69172 -10.54271 -10.50993 -10.34257 -10.26055 -10.12090 -10.02072 -9.84531 -9.46279 -8.37505 -8.18675 -6.89696 -6.06481 -3.86576 3.52240 3.54924 3.70046 4.66760 5.10190 5.23157 5.28700 5.33402 5.74741 5.96953 5.99132 6.04745 6.09166 6.16850 6.18871 6.24168 6.31865 6.35737 6.37892 6.46098 6.61637 6.65426 6.75436 6.79907 6.93183 6.99746 7.22816 7.40534 8.10229 8.37775 8.62056 8.75205 9.15020 9.95266 11.31643 Molecular weight = 197.15amu Principal moments of inertia in cm(-1) A = 0.035299 B = 0.013912 C = 0.011256 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 793.034070 B = 2012.194897 C = 2486.966980 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 N -0.525 5.525 3 C 0.012 3.988 4 C 0.210 3.790 5 H 0.027 0.973 6 C -0.599 4.599 7 H 0.047 0.953 8 C 0.036 3.964 9 N -0.895 5.895 10 Si 1.062 2.938 11 H -0.291 1.291 12 H -0.287 1.287 13 H -0.292 1.292 14 C -0.111 4.111 15 C -0.123 4.123 16 C -0.125 4.125 17 C -0.125 4.125 18 C -0.107 4.107 19 H 0.011 0.989 20 H 0.038 0.962 21 H 0.069 0.931 22 H 0.052 0.948 23 H 0.043 0.957 24 H 0.022 0.978 25 H 0.286 0.714 26 H 0.062 0.938 27 H 0.063 0.937 28 H 0.052 0.948 29 H 0.057 0.943 30 H 0.054 0.946 31 H 0.053 0.947 32 H 0.059 0.941 33 H 0.046 0.954 34 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.007 4.857 7.050 9.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 N -0.249 5.249 3 C -0.136 4.136 4 C 0.104 3.896 5 H 0.045 0.955 6 C -0.638 4.638 7 H 0.065 0.935 8 C -0.173 4.173 9 N -0.530 5.530 10 Si 0.892 3.108 11 H -0.218 1.218 12 H -0.213 1.213 13 H -0.218 1.218 14 C -0.131 4.131 15 C -0.160 4.160 16 C -0.163 4.163 17 C -0.163 4.163 18 C -0.145 4.145 19 H 0.029 0.971 20 H 0.057 0.943 21 H 0.087 0.913 22 H 0.071 0.929 23 H 0.062 0.938 24 H 0.040 0.960 25 H 0.098 0.902 26 H 0.081 0.919 27 H 0.082 0.918 28 H 0.071 0.929 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.071 0.929 32 H 0.078 0.922 33 H 0.065 0.935 34 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.428 3.412 5.556 6.958 hybrid contribution -0.819 1.704 1.725 2.559 sum -3.247 5.116 7.281 9.473 Atomic orbital electron populations 1.22125 0.89812 1.01577 0.97264 1.62722 1.06246 1.09879 1.46018 1.22627 0.99825 0.92221 0.98976 1.19603 0.93152 0.93852 0.82948 0.95531 1.21779 1.36893 0.91870 1.13250 0.93495 1.25539 0.93519 1.05436 0.92853 1.70533 1.35219 1.10523 1.36676 0.83675 0.76291 0.75434 0.75436 1.21792 1.21310 1.21805 1.22395 1.00659 0.92217 0.97851 1.22731 1.00673 0.98053 0.94529 1.22513 0.99772 0.97121 0.96865 1.22393 0.99824 0.95571 0.98486 1.22089 1.00411 0.97896 0.94122 0.97122 0.94349 0.91272 0.92888 0.93812 0.95988 0.90198 0.91917 0.91837 0.92934 0.92412 0.92728 0.92866 0.92218 0.93523 0.90062 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.87 8.64 60.06 0.52 1.39 16 2 N -0.53 -12.37 3.47 -244.60 -0.85 -13.22 16 3 C 0.01 0.25 8.42 60.06 0.51 0.75 16 4 C 0.21 5.12 0.87 -68.87 -0.06 5.06 16 5 H 0.03 0.72 7.52 -51.93 -0.39 0.33 16 6 C -0.60 -16.36 6.79 -34.44 -0.23 -16.59 16 7 H 0.05 1.29 7.21 -52.48 -0.38 0.91 16 8 C 0.04 1.01 5.39 -17.82 -0.10 0.92 16 9 N -0.90 -27.14 13.51 55.43 0.75 -26.40 16 10 Si 1.06 25.44 29.90 -169.99 -5.08 20.35 16 11 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 12 H -0.29 -6.90 7.11 56.52 0.40 -6.50 16 13 H -0.29 -6.67 7.11 56.52 0.40 -6.26 16 14 C -0.11 -2.29 1.93 -89.50 -0.17 -2.46 16 15 C -0.12 -2.17 4.31 -25.07 -0.11 -2.27 16 16 C -0.13 -1.91 6.91 -24.74 -0.17 -2.09 16 17 C -0.13 -2.02 6.83 -25.07 -0.17 -2.19 16 18 C -0.11 -2.07 5.66 -25.61 -0.15 -2.21 16 19 H 0.01 0.21 5.76 -51.93 -0.30 -0.09 16 20 H 0.04 0.75 8.14 -51.93 -0.42 0.32 16 21 H 0.07 1.59 7.57 -51.93 -0.39 1.20 16 22 H 0.05 1.08 7.88 -51.93 -0.41 0.67 16 23 H 0.04 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.02 0.40 4.66 -51.93 -0.24 0.16 16 25 H 0.29 8.67 6.39 -40.82 -0.26 8.41 16 26 H 0.06 1.34 5.95 -51.93 -0.31 1.03 16 27 H 0.06 1.17 6.56 -51.93 -0.34 0.83 16 28 H 0.05 0.89 6.93 -51.93 -0.36 0.53 16 29 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 30 H 0.05 0.75 8.14 -51.93 -0.42 0.32 16 31 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 32 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 33 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 34 H 0.08 1.76 6.85 -51.93 -0.36 1.41 16 LS Contribution 254.21 15.07 3.83 3.83 Total: -1.00 -29.19 254.21 -6.98 -36.17 By element: Atomic # 1 Polarization: 4.46 SS G_CDS: -5.49 Total: -1.04 kcal Atomic # 6 Polarization: -19.57 SS G_CDS: -0.13 Total: -19.70 kcal Atomic # 7 Polarization: -39.52 SS G_CDS: -0.10 Total: -39.62 kcal Atomic # 14 Polarization: 25.44 SS G_CDS: -5.08 Total: 20.35 kcal Total LS contribution 3.83 Total: 3.83 kcal Total: -29.19 -6.98 -36.17 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259479740.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.250 kcal (2) G-P(sol) polarization free energy of solvation -29.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.061 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.979 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds