Wall clock time and date at job start Mon Mar 30 2020 02:04:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46902 * 109.47194 * 2 1 4 4 C 1.46899 * 110.99971 * 196.00971 * 3 2 1 5 5 H 1.09003 * 109.47206 * 186.04448 * 4 3 2 6 6 C 1.53002 * 109.47019 * 306.04227 * 4 3 2 7 7 C 1.50693 * 109.47388 * 66.04204 * 4 3 2 8 8 H 1.08005 * 119.99761 * 0.02562 * 7 4 3 9 9 C 1.37876 * 120.00486 * 180.27475 * 7 4 3 10 10 N 1.31521 * 119.99489 * 359.72898 * 9 7 4 11 11 Si 1.86796 * 120.00582 * 179.72776 * 9 7 4 12 12 H 1.48493 * 109.47343 * 89.99797 * 11 9 7 13 13 H 1.48500 * 109.47372 * 210.00397 * 11 9 7 14 14 H 1.48510 * 109.46969 * 329.99871 * 11 9 7 15 15 C 1.46899 * 111.00091 * 72.05491 * 3 2 1 16 16 C 1.53787 * 113.61092 * 272.62962 * 15 3 2 17 17 C 1.53779 * 87.08121 * 220.01843 * 16 15 3 18 18 C 1.53782 * 87.08216 * 25.43347 * 17 16 15 19 19 H 1.08997 * 109.46929 * 173.57957 * 1 2 3 20 20 H 1.08999 * 109.47235 * 293.58204 * 1 2 3 21 21 H 1.09000 * 109.46662 * 53.58219 * 1 2 3 22 22 H 1.08999 * 109.47463 * 239.99340 * 2 1 3 23 23 H 1.08998 * 109.46752 * 119.99597 * 2 1 3 24 24 H 1.09001 * 109.47171 * 300.00261 * 6 4 3 25 25 H 1.09003 * 109.46951 * 60.00065 * 6 4 3 26 26 H 1.09004 * 109.47258 * 180.02562 * 6 4 3 27 27 H 0.96998 * 119.99997 * 179.97438 * 10 9 7 28 28 H 1.09002 * 112.85111 * 43.93589 * 15 3 2 29 29 H 1.08999 * 113.61827 * 334.56868 * 16 15 3 30 30 H 1.09006 * 113.61303 * 105.47431 * 16 15 3 31 31 H 1.09001 * 113.61985 * 270.88817 * 17 16 15 32 32 H 1.08997 * 113.61744 * 139.98023 * 17 16 15 33 33 H 1.09004 * 113.61816 * 220.01978 * 18 17 16 34 34 H 1.08998 * 113.69246 * 89.12320 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3850 0.0000 4 6 3.4380 1.4419 -0.3782 5 1 3.8032 2.4629 -0.2668 6 6 4.2452 0.5099 0.5277 7 6 3.5933 1.0067 -1.8126 8 1 2.7251 0.7172 -2.3860 9 6 4.8443 0.9731 -2.3913 10 7 5.9015 1.3261 -1.6931 11 14 5.0376 0.4264 -4.1670 12 1 4.9276 1.6055 -5.0628 13 1 6.3673 -0.2098 -4.3471 14 1 3.9716 -0.5515 -4.5027 15 6 1.7969 2.0222 1.3047 16 6 0.4140 2.6813 1.4401 17 6 1.1210 3.8305 2.1777 18 6 2.3936 3.4356 1.4100 19 1 -0.3633 -1.0212 -0.1149 20 1 -0.3633 0.4111 0.9418 21 1 -0.3633 0.6101 -0.8270 22 1 1.8934 -0.5139 -0.8899 23 1 1.8933 -0.5138 0.8900 24 1 4.1329 0.8247 1.5652 25 1 3.8801 -0.5111 0.4163 26 1 5.2978 0.5524 0.2474 27 1 6.7816 1.3021 -2.1001 28 1 2.0573 1.3747 2.1420 29 1 -0.0236 2.9779 0.4869 30 1 -0.2778 2.1196 2.0680 31 1 1.1957 3.6780 3.2544 32 1 0.7410 4.8176 1.9144 33 1 3.3001 3.4829 2.0135 34 1 2.4986 3.9379 0.4483 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261116733.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:04:38 Heat of formation + Delta-G solvation = 17.128149 kcal Electronic energy + Delta-G solvation = -13385.085590 eV Core-core repulsion = 11318.478926 eV Total energy + Delta-G solvation = -2066.606663 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 197.148 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -38.88299 -35.42167 -32.69140 -30.35963 -27.42083 -25.21955 -24.99238 -23.77961 -21.75736 -19.66481 -18.24356 -16.12117 -15.38200 -15.02930 -14.63522 -13.77143 -13.37819 -12.92582 -12.45643 -11.88530 -11.70196 -11.63276 -11.38896 -11.09060 -10.89068 -10.66460 -10.61784 -10.50513 -10.26573 -10.01833 -9.94620 -9.54032 -9.36236 -8.78464 -8.31158 -7.07955 -5.96211 -3.99167 3.33653 3.39859 3.43469 4.45163 5.01850 5.16200 5.28085 5.34981 5.44131 5.51330 5.85589 6.03204 6.07289 6.11774 6.22450 6.26761 6.37903 6.47457 6.50604 6.73054 6.78463 6.83596 6.91956 6.94573 6.98694 7.24375 7.59557 7.77375 7.91686 8.25782 8.48083 8.71069 9.07750 9.65517 11.10819 Molecular weight = 197.15amu Principal moments of inertia in cm(-1) A = 0.041647 B = 0.011236 C = 0.010040 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 672.160099 B = 2491.296193 C = 2788.233660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.057 3.943 3 N -0.520 5.520 4 C 0.209 3.791 5 H 0.044 0.956 6 C -0.169 4.169 7 C -0.497 4.497 8 H 0.061 0.939 9 C 0.057 3.943 10 N -0.895 5.895 11 Si 0.895 3.105 12 H -0.281 1.281 13 H -0.289 1.289 14 H -0.275 1.275 15 C 0.060 3.940 16 C -0.125 4.125 17 C -0.147 4.147 18 C -0.127 4.127 19 H 0.042 0.958 20 H 0.045 0.955 21 H 0.057 0.943 22 H 0.081 0.919 23 H 0.018 0.982 24 H 0.004 0.996 25 H 0.027 0.973 26 H 0.086 0.914 27 H 0.259 0.741 28 H 0.050 0.950 29 H 0.085 0.915 30 H 0.053 0.947 31 H 0.070 0.930 32 H 0.062 0.938 33 H 0.057 0.943 34 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.533 0.891 5.470 9.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.071 4.071 3 N -0.244 5.244 4 C 0.103 3.897 5 H 0.061 0.939 6 C -0.229 4.229 7 C -0.536 4.536 8 H 0.079 0.921 9 C -0.144 4.144 10 N -0.535 5.535 11 Si 0.723 3.277 12 H -0.208 1.208 13 H -0.214 1.214 14 H -0.200 1.200 15 C -0.050 4.050 16 C -0.163 4.163 17 C -0.185 4.185 18 C -0.165 4.165 19 H 0.061 0.939 20 H 0.064 0.936 21 H 0.076 0.924 22 H 0.099 0.901 23 H 0.036 0.964 24 H 0.023 0.977 25 H 0.046 0.954 26 H 0.105 0.895 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.104 0.896 30 H 0.072 0.928 31 H 0.089 0.911 32 H 0.081 0.919 33 H 0.076 0.924 34 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -7.597 1.165 5.084 9.215 hybrid contribution 0.764 -0.828 -0.275 1.160 sum -6.833 0.337 4.809 8.363 Atomic orbital electron populations 1.21861 0.97015 0.99981 1.01451 1.21927 0.93752 0.90843 1.00574 1.62541 1.21930 1.15650 1.24281 1.19313 0.80540 0.95939 0.93884 0.93858 1.22403 1.05624 0.99030 0.95814 1.21147 0.92699 1.43648 0.96056 0.92055 1.24927 0.95930 0.95684 0.97830 1.69893 0.98512 1.48965 1.36132 0.86550 0.77188 0.78768 0.85187 1.20756 1.21450 1.19993 1.22989 0.95744 0.94225 0.92017 1.23024 0.96446 0.96680 1.00114 1.22778 0.98379 0.98549 0.98772 1.22941 0.96214 0.96724 1.00594 0.93872 0.93554 0.92382 0.90076 0.96425 0.97672 0.95367 0.89528 0.93117 0.93223 0.89598 0.92821 0.91118 0.91911 0.92372 0.89194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.39 9.43 37.16 0.35 -2.04 16 2 C 0.06 1.15 4.39 -3.82 -0.02 1.14 16 3 N -0.52 -11.25 4.41 -219.13 -0.97 -12.22 16 4 C 0.21 5.28 2.13 -68.87 -0.15 5.13 16 5 H 0.04 1.19 6.42 -51.93 -0.33 0.86 16 6 C -0.17 -4.18 8.31 37.16 0.31 -3.87 16 7 C -0.50 -13.68 7.74 -34.44 -0.27 -13.95 16 8 H 0.06 1.70 7.26 -52.48 -0.38 1.32 16 9 C 0.06 1.58 5.30 -17.82 -0.09 1.48 16 10 N -0.90 -25.67 11.31 55.43 0.63 -25.05 16 11 Si 0.89 21.54 29.54 -169.99 -5.02 16.52 16 12 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 13 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 14 H -0.27 -6.54 7.11 56.52 0.40 -6.14 16 15 C 0.06 1.11 2.37 -66.90 -0.16 0.95 16 16 C -0.12 -1.94 6.13 -25.92 -0.16 -2.10 16 17 C -0.15 -2.11 8.08 -25.92 -0.21 -2.32 16 18 C -0.13 -2.25 6.37 -25.92 -0.17 -2.41 16 19 H 0.04 0.63 8.14 -51.93 -0.42 0.20 16 20 H 0.05 0.71 6.05 -51.93 -0.31 0.39 16 21 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 22 H 0.08 1.79 6.59 -51.93 -0.34 1.45 16 23 H 0.02 0.35 7.00 -51.93 -0.36 -0.01 16 24 H 0.00 0.10 7.24 -51.93 -0.38 -0.28 16 25 H 0.03 0.67 6.69 -51.93 -0.35 0.32 16 26 H 0.09 2.35 6.06 -51.93 -0.31 2.04 16 27 H 0.26 7.11 8.31 -40.82 -0.34 6.77 16 28 H 0.05 0.95 7.54 -51.93 -0.39 0.56 16 29 H 0.09 1.40 8.14 -51.93 -0.42 0.98 16 30 H 0.05 0.76 7.43 -51.93 -0.39 0.37 16 31 H 0.07 0.92 8.14 -51.93 -0.42 0.50 16 32 H 0.06 0.82 8.14 -51.93 -0.42 0.40 16 33 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 34 H 0.09 1.73 7.66 -51.93 -0.40 1.34 16 LS Contribution 259.93 15.07 3.92 3.92 Total: -1.00 -27.84 259.93 -7.62 -35.46 By element: Atomic # 1 Polarization: 4.99 SS G_CDS: -5.62 Total: -0.63 kcal Atomic # 6 Polarization: -17.44 SS G_CDS: -0.56 Total: -18.00 kcal Atomic # 7 Polarization: -36.93 SS G_CDS: -0.34 Total: -37.27 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Total LS contribution 3.92 Total: 3.92 kcal Total: -27.84 -7.62 -35.46 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261116733.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.585 kcal (2) G-P(sol) polarization free energy of solvation -27.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.457 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds