Wall clock time and date at job start Mon Mar 30 2020 02:31:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42903 * 114.00239 * 2 1 4 4 C 1.53002 * 109.47280 * 179.97438 * 3 2 1 5 5 H 1.09004 * 109.46930 * 55.00058 * 4 3 2 6 6 C 1.53001 * 109.46963 * 295.00317 * 4 3 2 7 7 C 1.53002 * 109.46637 * 179.97438 * 6 4 3 8 8 C 1.53006 * 109.46977 * 59.99946 * 7 6 4 9 9 C 1.52997 * 109.47127 * 299.99541 * 8 7 6 10 10 H 1.09002 * 109.47153 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47212 * 300.00129 * 9 8 7 12 12 H 1.07999 * 119.99742 * 119.99976 * 11 9 8 13 13 C 1.37875 * 120.00221 * 300.00211 * 11 9 8 14 14 N 1.31509 * 120.00392 * 180.02562 * 13 11 9 15 15 Si 1.86799 * 119.99966 * 359.97438 * 13 11 9 16 16 H 1.48505 * 109.47157 * 90.00092 * 15 13 11 17 17 H 1.48496 * 109.47225 * 210.00367 * 15 13 11 18 18 H 1.48502 * 109.47022 * 330.00490 * 15 13 11 19 19 C 1.52996 * 109.46969 * 175.00063 * 4 3 2 20 20 H 1.09003 * 109.47090 * 59.99539 * 1 2 3 21 21 H 1.08995 * 109.47652 * 180.02562 * 1 2 3 22 22 H 1.08998 * 109.46998 * 300.00575 * 1 2 3 23 23 H 1.09000 * 109.47075 * 59.99675 * 3 2 1 24 24 H 1.09002 * 109.46934 * 299.99791 * 3 2 1 25 25 H 1.08996 * 109.46778 * 299.99646 * 6 4 3 26 26 H 1.08992 * 109.47514 * 59.99933 * 6 4 3 27 27 H 1.09000 * 109.46986 * 179.97438 * 7 6 4 28 28 H 1.08993 * 109.47662 * 299.99908 * 7 6 4 29 29 H 1.08998 * 109.46505 * 179.97438 * 8 7 6 30 30 H 1.08996 * 109.46884 * 60.00293 * 8 7 6 31 31 H 0.96997 * 120.00462 * 179.97438 * 14 13 11 32 32 H 1.08996 * 109.47452 * 59.99938 * 19 4 3 33 33 H 1.09000 * 109.47054 * 300.00097 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1846 0.0006 5 1 3.8515 0.5682 -0.8410 6 6 3.9952 0.5368 1.3083 7 6 5.5204 0.4154 1.3086 8 6 6.1428 1.8075 1.1826 9 6 5.6831 2.4552 -0.1250 10 1 6.1268 3.4467 -0.2150 11 6 6.1194 1.6027 -1.2886 12 1 5.3826 1.1888 -1.9610 13 6 7.4593 1.3510 -1.4946 14 7 7.8401 0.6074 -2.5102 15 14 8.7337 2.0673 -0.3319 16 1 8.9804 1.1144 0.7801 17 1 9.9999 2.3046 -1.0706 18 1 8.2340 3.3525 0.2193 19 6 4.1574 2.5768 -0.1251 20 1 -0.3633 0.5139 -0.8900 21 1 -0.3634 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8899 23 1 1.6886 1.8464 0.8900 24 1 1.6887 1.8464 -0.8900 25 1 3.6792 1.1533 2.1498 26 1 3.5521 -0.4550 1.3978 27 1 5.8480 -0.0457 2.2403 28 1 5.8360 -0.2012 0.4671 29 1 7.2293 1.7210 1.1833 30 1 5.8272 2.4240 2.0242 31 1 8.7828 0.4306 -2.6554 32 1 3.8414 3.1933 0.7165 33 1 3.8298 3.0383 -1.0566 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261271269.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:31:34 Heat of formation + Delta-G solvation = -68.683458 kcal Electronic energy + Delta-G solvation = -13364.621301 eV Core-core repulsion = 11196.574905 eV Total energy + Delta-G solvation = -2168.046396 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 198.136 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -38.53854 -36.91010 -32.61249 -31.01706 -30.00494 -26.82232 -24.74575 -24.56680 -21.31150 -20.40317 -18.68971 -16.18314 -15.90385 -15.50910 -15.15368 -14.59088 -13.92238 -13.34947 -13.04306 -12.65199 -12.28656 -11.99988 -11.49471 -11.43922 -11.30416 -10.85706 -10.63750 -10.21057 -10.00117 -9.87859 -9.69518 -9.42767 -9.08362 -8.95197 -8.69881 -8.43022 -5.99101 -3.95893 3.32766 3.42765 3.44885 4.09196 4.48297 5.31151 5.31676 5.38552 5.46486 5.58965 5.65976 5.72501 5.81035 5.93539 6.18474 6.26445 6.36527 6.44755 6.48775 6.53316 6.64618 6.72019 6.92962 7.07182 7.22565 7.34007 7.36851 7.51999 7.55058 7.88866 8.61531 9.05344 9.64380 11.14083 Molecular weight = 198.14amu Principal moments of inertia in cm(-1) A = 0.053677 B = 0.010234 C = 0.009687 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 521.514927 B = 2735.438724 C = 2889.752179 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.388 6.388 3 C 0.065 3.935 4 C -0.079 4.079 5 H 0.093 0.907 6 C -0.097 4.097 7 C -0.108 4.108 8 C -0.117 4.117 9 C 0.009 3.991 10 H 0.026 0.974 11 C -0.501 4.501 12 H 0.075 0.925 13 C 0.068 3.932 14 N -0.904 5.904 15 Si 0.885 3.115 16 H -0.280 1.280 17 H -0.300 1.300 18 H -0.268 1.268 19 C -0.087 4.087 20 H 0.037 0.963 21 H 0.080 0.920 22 H 0.035 0.965 23 H 0.040 0.960 24 H 0.044 0.956 25 H 0.043 0.957 26 H 0.056 0.944 27 H 0.037 0.963 28 H 0.080 0.920 29 H 0.042 0.958 30 H 0.033 0.967 31 H 0.262 0.738 32 H 0.037 0.963 33 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.064 1.489 6.968 12.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.307 6.307 3 C -0.011 4.011 4 C -0.098 4.098 5 H 0.111 0.889 6 C -0.135 4.135 7 C -0.146 4.146 8 C -0.155 4.155 9 C -0.010 4.010 10 H 0.044 0.956 11 C -0.539 4.539 12 H 0.093 0.907 13 C -0.133 4.133 14 N -0.543 5.543 15 Si 0.716 3.284 16 H -0.207 1.207 17 H -0.228 1.228 18 H -0.193 1.193 19 C -0.125 4.125 20 H 0.055 0.945 21 H 0.099 0.901 22 H 0.054 0.946 23 H 0.058 0.942 24 H 0.062 0.938 25 H 0.062 0.938 26 H 0.074 0.926 27 H 0.055 0.945 28 H 0.099 0.901 29 H 0.060 0.940 30 H 0.052 0.948 31 H 0.071 0.929 32 H 0.055 0.945 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -9.803 1.250 6.871 12.037 hybrid contribution 0.591 0.553 0.604 1.010 sum -9.212 1.803 7.476 12.000 Atomic orbital electron populations 1.22672 0.82245 1.02140 0.99446 1.87927 1.18616 1.28855 1.95274 1.22777 0.95507 0.83745 0.99099 1.21129 0.89857 0.98767 1.00014 0.88866 1.21380 0.96289 0.99657 0.96166 1.21393 0.94495 0.97977 1.00696 1.21845 0.98706 0.96485 0.98452 1.19185 0.91660 0.96458 0.93668 0.95585 1.21021 0.92808 1.30212 1.09852 0.90655 1.24998 0.98445 0.94747 0.95081 1.69900 1.16164 1.38685 1.29522 0.86879 0.80723 0.80215 0.80550 1.20712 1.22820 1.19316 1.21341 0.97605 0.94240 0.99329 0.94483 0.90131 0.94650 0.94198 0.93791 0.93809 0.92562 0.94457 0.90115 0.93976 0.94815 0.92866 0.94451 0.92844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 11.01 101.05 1.11 1.49 16 2 O -0.39 -6.41 10.24 -35.23 -0.36 -6.77 16 3 C 0.07 1.05 5.32 37.16 0.20 1.25 16 4 C -0.08 -1.52 2.20 -90.62 -0.20 -1.72 16 5 H 0.09 2.08 6.62 -51.93 -0.34 1.74 16 6 C -0.10 -1.81 5.10 -26.73 -0.14 -1.94 16 7 C -0.11 -2.24 5.70 -26.73 -0.15 -2.39 16 8 C -0.12 -2.58 4.94 -26.73 -0.13 -2.71 16 9 C 0.01 0.21 2.18 -91.75 -0.20 0.01 16 10 H 0.03 0.63 7.20 -51.93 -0.37 0.25 16 11 C -0.50 -13.77 7.19 -34.44 -0.25 -14.01 16 12 H 0.08 2.24 6.95 -52.49 -0.36 1.88 16 13 C 0.07 1.95 5.45 -17.82 -0.10 1.86 16 14 N -0.90 -27.71 13.96 55.43 0.77 -26.94 16 15 Si 0.89 22.29 24.37 -169.99 -4.14 18.15 16 16 H -0.28 -6.92 6.87 56.52 0.39 -6.53 16 17 H -0.30 -7.61 7.11 56.52 0.40 -7.21 16 18 H -0.27 -6.48 6.53 56.52 0.37 -6.12 16 19 C -0.09 -1.73 4.70 -26.71 -0.13 -1.86 16 20 H 0.04 0.40 8.14 -51.93 -0.42 -0.02 16 21 H 0.08 0.83 8.14 -51.93 -0.42 0.40 16 22 H 0.03 0.37 8.14 -51.93 -0.42 -0.05 16 23 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.04 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.04 0.74 8.14 -51.93 -0.42 0.32 16 26 H 0.06 1.02 7.82 -51.93 -0.41 0.61 16 27 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 28 H 0.08 1.90 7.22 -51.93 -0.37 1.53 16 29 H 0.04 0.98 3.27 -51.93 -0.17 0.81 16 30 H 0.03 0.66 8.14 -51.93 -0.42 0.23 16 31 H 0.26 7.59 8.31 -40.82 -0.34 7.25 16 32 H 0.04 0.66 8.14 -51.93 -0.42 0.23 16 33 H 0.05 1.04 8.14 -51.93 -0.42 0.62 16 LS Contribution 251.67 15.07 3.79 3.79 Total: -1.00 -29.80 251.67 -5.36 -35.16 By element: Atomic # 1 Polarization: 2.08 SS G_CDS: -5.44 Total: -3.37 kcal Atomic # 6 Polarization: -20.04 SS G_CDS: 0.02 Total: -20.02 kcal Atomic # 7 Polarization: -27.71 SS G_CDS: 0.77 Total: -26.94 kcal Atomic # 8 Polarization: -6.41 SS G_CDS: -0.36 Total: -6.77 kcal Atomic # 14 Polarization: 22.29 SS G_CDS: -4.14 Total: 18.15 kcal Total LS contribution 3.79 Total: 3.79 kcal Total: -29.80 -5.36 -35.16 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261271269.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.528 kcal (2) G-P(sol) polarization free energy of solvation -29.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds