Wall clock time and date at job start Mon Mar 30 2020 02:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52996 * 109.46799 * 2 1 4 4 N 1.46907 * 109.46906 * 174.66314 * 3 2 1 5 5 C 1.47840 * 110.99817 * 175.25011 * 4 3 2 6 6 C 1.54909 * 104.79274 * 213.63853 * 5 4 3 7 7 C 1.55139 * 101.65576 * 37.06988 * 6 5 4 8 8 H 1.08991 * 110.85849 * 82.80040 * 7 6 5 9 9 N 1.46503 * 110.70824 * 205.96694 * 7 6 5 10 10 C 1.36932 * 119.99975 * 268.60104 * 9 7 6 11 11 H 1.08006 * 119.99918 * 359.97438 * 10 9 7 12 12 C 1.38812 * 120.00198 * 179.97438 * 10 9 7 13 13 N 1.31616 * 120.00204 * 179.97438 * 12 10 9 14 14 Si 1.86806 * 119.99840 * 359.97438 * 12 10 9 15 15 H 1.48499 * 109.46873 * 90.00194 * 14 12 10 16 16 H 1.48500 * 109.46982 * 210.00136 * 14 12 10 17 17 H 1.48502 * 109.46847 * 330.00137 * 14 12 10 18 18 C 1.47444 * 110.99645 * 54.40567 * 4 3 2 19 19 H 1.08992 * 109.47111 * 299.99459 * 1 2 3 20 20 H 1.09000 * 109.46910 * 60.00203 * 1 2 3 21 21 H 1.09003 * 109.46910 * 179.97438 * 1 2 3 22 22 H 1.09002 * 109.47148 * 239.99971 * 2 1 3 23 23 H 1.09005 * 109.46621 * 120.00161 * 2 1 3 24 24 H 1.09002 * 109.47179 * 54.66482 * 3 2 1 25 25 H 1.09001 * 109.47192 * 294.66331 * 3 2 1 26 26 H 1.09003 * 110.37569 * 332.46202 * 5 4 3 27 27 H 1.08996 * 110.37446 * 94.81149 * 5 4 3 28 28 H 1.08997 * 110.99143 * 155.16000 * 6 5 4 29 29 H 1.09006 * 110.98895 * 278.97850 * 6 5 4 30 30 H 0.97001 * 119.99620 * 88.59284 * 9 7 6 31 31 H 0.96995 * 120.00307 * 180.02562 * 13 12 10 32 32 H 1.09002 * 109.88575 * 242.65942 * 18 4 3 33 33 H 1.08997 * 109.89010 * 3.68499 * 18 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5034 1.4445 0.1288 5 6 4.0430 2.8165 0.0188 6 6 5.4156 2.6470 -0.6790 7 6 5.1156 1.5073 -1.6879 8 1 4.6520 1.9015 -2.5921 9 7 6.3383 0.7693 -2.0144 10 6 7.1023 1.1497 -3.0852 11 1 6.8032 1.9936 -3.6894 12 6 8.2611 0.4509 -3.3943 13 7 8.9952 0.8162 -4.4239 14 14 8.7788 -1.0082 -2.3490 15 1 8.1794 -2.2498 -2.9007 16 1 10.2591 -1.1255 -2.3612 17 1 8.3094 -0.8092 -0.9542 18 6 4.1267 0.6097 -0.9145 19 1 -0.3633 0.5137 0.8900 20 1 -0.3633 0.5138 -0.8900 21 1 -0.3633 -1.0277 -0.0005 22 1 1.8934 -0.5138 -0.8900 23 1 1.8933 -0.5139 0.8900 24 1 1.6007 1.9832 0.8384 25 1 1.7568 1.9280 -0.9339 26 1 3.3829 3.4364 -0.5879 27 1 4.1721 3.2540 1.0088 28 1 5.7056 3.5609 -1.1973 29 1 6.1819 2.3448 0.0350 30 1 6.6067 0.0113 -1.4719 31 1 9.8047 0.3277 -4.6401 32 1 4.6619 -0.2208 -0.4542 33 1 3.3616 0.2284 -1.5906 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258512380.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:08:42 Heat of formation + Delta-G solvation = 10.826481 kcal Electronic energy + Delta-G solvation = -12869.834744 eV Core-core repulsion = 10737.528909 eV Total energy + Delta-G solvation = -2132.305835 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 198.143 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -38.87541 -35.09709 -33.39135 -31.26881 -29.41616 -27.89440 -25.13940 -23.09484 -21.54401 -20.49532 -19.62079 -17.65191 -15.96402 -15.65292 -14.85949 -14.16909 -13.98015 -13.33886 -12.90020 -12.75679 -12.63347 -12.31651 -11.92543 -11.65670 -11.36602 -11.06748 -10.85549 -10.75829 -10.65813 -10.41115 -10.35783 -10.01470 -9.60020 -8.91332 -8.05740 -7.26890 -5.77824 -3.13601 3.38615 3.42427 3.46038 4.18911 4.59126 4.86757 5.01984 5.12076 5.28006 5.34963 5.43068 5.53812 5.60765 5.63099 5.74778 5.75547 5.77893 5.95025 6.05455 6.12257 6.17220 6.24655 6.37252 6.46450 6.68724 6.89369 7.24519 7.34513 7.98226 8.41441 9.19570 9.92214 10.12328 11.40431 Molecular weight = 198.14amu Principal moments of inertia in cm(-1) A = 0.049144 B = 0.008118 C = 0.007558 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 569.615657 B = 3448.168964 C = 3703.810049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.128 4.128 3 C 0.051 3.949 4 N -0.531 5.531 5 C 0.042 3.958 6 C -0.149 4.149 7 C 0.166 3.834 8 H 0.062 0.938 9 N -0.741 5.741 10 C -0.246 4.246 11 H 0.090 0.910 12 C 0.006 3.994 13 N -0.934 5.934 14 Si 0.884 3.116 15 H -0.284 1.284 16 H -0.291 1.291 17 H -0.276 1.276 18 C 0.030 3.970 19 H 0.053 0.947 20 H 0.052 0.948 21 H 0.054 0.946 22 H 0.065 0.935 23 H 0.069 0.931 24 H 0.069 0.931 25 H 0.031 0.969 26 H 0.041 0.959 27 H 0.071 0.929 28 H 0.067 0.933 29 H 0.072 0.928 30 H 0.363 0.637 31 H 0.260 0.740 32 H 0.074 0.926 33 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.138 0.327 9.405 16.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.165 4.165 3 C -0.077 4.077 4 N -0.255 5.255 5 C -0.086 4.086 6 C -0.190 4.190 7 C 0.055 3.945 8 H 0.080 0.920 9 N -0.383 5.383 10 C -0.376 4.376 11 H 0.107 0.893 12 C -0.190 4.190 13 N -0.581 5.581 14 Si 0.714 3.286 15 H -0.210 1.210 16 H -0.217 1.217 17 H -0.202 1.202 18 C -0.099 4.099 19 H 0.072 0.928 20 H 0.071 0.929 21 H 0.073 0.927 22 H 0.084 0.916 23 H 0.088 0.912 24 H 0.088 0.912 25 H 0.049 0.951 26 H 0.059 0.941 27 H 0.090 0.910 28 H 0.086 0.914 29 H 0.090 0.910 30 H 0.196 0.804 31 H 0.070 0.930 32 H 0.092 0.908 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -13.920 0.224 9.667 16.949 hybrid contribution 0.301 -0.657 -0.114 0.732 sum -13.619 -0.433 9.553 16.641 Atomic orbital electron populations 1.21729 0.95839 1.01556 1.01590 1.21655 0.95299 0.96718 1.02853 1.22295 0.88569 0.96915 0.99934 1.63642 1.04467 1.10215 1.47185 1.23002 0.96284 0.89380 0.99931 1.23385 0.95479 1.00809 0.99320 1.21373 0.87326 0.90881 0.94945 0.91987 1.42706 1.25181 1.35791 1.34576 1.19085 1.02568 1.12522 1.03393 0.89262 1.24667 0.97404 0.99133 0.97828 1.69699 1.16912 1.42504 1.29021 0.86552 0.77850 0.83705 0.80487 1.21042 1.21698 1.20162 1.23183 0.97312 0.97051 0.92338 0.92821 0.92914 0.92711 0.91641 0.91196 0.91210 0.95065 0.94106 0.91031 0.91395 0.90963 0.80384 0.93030 0.90790 0.92550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.37 9.91 37.16 0.37 -1.00 16 2 C -0.13 -1.45 5.58 -26.73 -0.15 -1.60 16 3 C 0.05 0.64 4.85 -3.82 -0.02 0.62 16 4 N -0.53 -8.02 5.28 -231.25 -1.22 -9.24 16 5 C 0.04 0.62 6.73 -2.30 -0.02 0.60 16 6 C -0.15 -2.66 6.76 -24.59 -0.17 -2.82 16 7 C 0.17 3.29 3.61 -66.11 -0.24 3.05 16 8 H 0.06 1.27 8.09 -51.93 -0.42 0.85 16 9 N -0.74 -17.82 5.03 -51.66 -0.26 -18.08 16 10 C -0.25 -6.99 10.44 -15.06 -0.16 -7.15 16 11 H 0.09 2.71 8.06 -52.48 -0.42 2.29 16 12 C 0.01 0.16 5.50 -17.43 -0.10 0.07 16 13 N -0.93 -29.48 13.97 55.49 0.78 -28.70 16 14 Si 0.88 22.29 27.74 -169.99 -4.71 17.58 16 15 H -0.28 -7.09 7.11 56.52 0.40 -6.69 16 16 H -0.29 -7.42 7.11 56.52 0.40 -7.01 16 17 H -0.28 -6.59 6.52 56.52 0.37 -6.23 16 18 C 0.03 0.50 5.94 -2.83 -0.02 0.48 16 19 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 20 H 0.05 0.47 8.14 -51.93 -0.42 0.05 16 21 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 22 H 0.06 0.79 6.37 -51.93 -0.33 0.46 16 23 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 25 H 0.03 0.39 7.97 -51.93 -0.41 -0.02 16 26 H 0.04 0.56 7.70 -51.93 -0.40 0.16 16 27 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 28 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 29 H 0.07 1.37 8.14 -51.93 -0.42 0.95 16 30 H 0.36 8.61 5.43 -40.82 -0.22 8.39 16 31 H 0.26 7.80 8.31 -40.82 -0.34 7.46 16 32 H 0.07 1.30 7.72 -51.93 -0.40 0.90 16 33 H 0.06 0.89 5.96 -51.93 -0.31 0.59 16 LS Contribution 262.80 15.07 3.96 3.96 Total: -1.00 -30.46 262.80 -7.42 -37.88 By element: Atomic # 1 Polarization: 9.80 SS G_CDS: -5.47 Total: 4.34 kcal Atomic # 6 Polarization: -7.25 SS G_CDS: -0.49 Total: -7.74 kcal Atomic # 7 Polarization: -55.31 SS G_CDS: -0.70 Total: -56.02 kcal Atomic # 14 Polarization: 22.29 SS G_CDS: -4.71 Total: 17.58 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -30.46 -7.42 -37.88 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258512380.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.707 kcal (2) G-P(sol) polarization free energy of solvation -30.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.244 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.881 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds