Wall clock time and date at job start Mon Mar 30 2020 01:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.47844 * 110.99982 * 2 1 4 4 C 1.55380 * 104.83918 * 146.36889 * 3 2 1 5 5 H 1.08996 * 111.00619 * 80.94186 * 4 3 2 6 6 N 1.46497 * 111.17466 * 204.90382 * 4 3 2 7 7 C 1.36933 * 120.00127 * 267.11385 * 6 4 3 8 8 H 1.08003 * 120.00080 * 359.97438 * 7 6 4 9 9 C 1.38816 * 120.00217 * 180.02562 * 7 6 4 10 10 N 1.31614 * 119.99817 * 359.97438 * 9 7 6 11 11 Si 1.86802 * 119.99929 * 179.97438 * 9 7 6 12 12 H 1.48504 * 109.47310 * 0.02562 * 11 9 7 13 13 H 1.48499 * 109.47294 * 119.99912 * 11 9 7 14 14 H 1.48492 * 109.47114 * 239.99850 * 11 9 7 15 15 C 1.55142 * 101.43737 * 322.95685 * 4 3 2 16 16 C 1.47443 * 111.00227 * 120.84156 * 2 1 3 17 17 C 1.53004 * 109.88444 * 117.33702 * 16 2 1 18 18 C 1.53000 * 110.02143 * 356.22708 * 16 2 1 19 19 H 1.09002 * 109.46844 * 299.15569 * 1 2 3 20 20 H 1.09002 * 109.47255 * 59.14950 * 1 2 3 21 21 H 1.08998 * 109.47076 * 179.15772 * 1 2 3 22 22 H 1.08999 * 110.37744 * 265.19940 * 3 2 1 23 23 H 1.09007 * 110.37325 * 27.42750 * 3 2 1 24 24 H 0.97006 * 120.00366 * 87.10790 * 6 4 3 25 25 H 0.97003 * 119.99823 * 180.02562 * 10 9 7 26 26 H 1.09002 * 110.70816 * 277.17375 * 15 4 3 27 27 H 1.09005 * 110.70106 * 154.11515 * 15 4 3 28 28 H 1.08999 * 109.46667 * 177.77254 * 17 16 2 29 29 H 1.09000 * 109.47014 * 297.77064 * 17 16 2 30 30 H 1.08996 * 109.47138 * 57.76907 * 17 16 2 31 31 H 1.08993 * 109.47205 * 302.14480 * 18 16 2 32 32 H 1.09003 * 109.47391 * 62.14402 * 18 16 2 33 33 H 1.08997 * 109.46993 * 182.14700 * 18 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9988 1.3802 0.0000 4 6 3.3089 1.3036 0.8319 5 1 4.1343 0.9281 0.2271 6 7 3.6402 2.6045 1.4184 7 6 4.4728 3.4638 0.7524 8 1 4.8855 3.1823 -0.2052 9 6 4.7871 4.6963 1.3083 10 7 4.2846 5.0391 2.4754 11 14 5.9234 5.8682 0.4000 12 1 6.3496 5.2507 -0.8815 13 1 5.2056 7.1381 0.1223 14 1 7.1179 6.1476 1.2368 15 6 2.9159 0.2822 1.9314 16 6 1.9974 -0.7057 1.1818 17 6 2.8008 -1.9307 0.7404 18 6 0.8461 -1.1387 2.0916 19 1 -0.3633 0.5007 0.8975 20 1 -0.3634 0.5270 -0.8823 21 1 -0.3633 -1.0275 -0.0151 22 1 2.2147 1.7039 -1.0182 23 1 1.2880 2.0596 0.4707 24 1 3.2698 2.8573 2.2785 25 1 4.5040 5.9005 2.8638 26 1 2.3744 0.7746 2.7392 27 1 3.7986 -0.2285 2.3163 28 1 3.2210 -2.4246 1.6165 29 1 2.1459 -2.6235 0.2119 30 1 3.6077 -1.6168 0.0782 31 1 0.2676 -0.2635 2.3871 32 1 0.2019 -1.8359 1.5557 33 1 1.2484 -1.6253 2.9801 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575530489.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:51:41 Heat of formation + Delta-G solvation = 15.644831 kcal Electronic energy + Delta-G solvation = -13229.555322 eV Core-core repulsion = 11097.458426 eV Total energy + Delta-G solvation = -2132.096896 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 198.143 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.35425 -34.53147 -32.01981 -31.68210 -28.90023 -27.11574 -25.11136 -24.34080 -23.04590 -20.06526 -18.34426 -17.24806 -15.44338 -15.26851 -14.50640 -14.13972 -13.58206 -13.10091 -12.87579 -12.71762 -12.57605 -12.28899 -11.61228 -11.21089 -11.20285 -11.05228 -10.83273 -10.79732 -10.55636 -10.38717 -10.14106 -9.85281 -9.66176 -8.91255 -7.91680 -6.96859 -5.78244 -3.07407 3.43160 3.49079 3.51305 4.30699 4.61682 4.98181 5.17027 5.31791 5.43749 5.59598 5.64788 5.73072 5.79529 5.88005 5.94130 5.98900 6.00366 6.07850 6.17334 6.25508 6.34465 6.41996 6.51763 6.62505 6.81968 6.98462 7.45229 7.53297 7.71890 8.40357 9.51378 10.08443 10.43009 11.44424 Molecular weight = 198.14amu Principal moments of inertia in cm(-1) A = 0.060035 B = 0.008333 C = 0.008219 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 466.279634 B = 3359.451593 C = 3405.930091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.527 5.527 3 C 0.019 3.981 4 C 0.175 3.825 5 H 0.064 0.936 6 N -0.717 5.717 7 C -0.240 4.240 8 H 0.073 0.927 9 C -0.014 4.014 10 N -0.933 5.933 11 Si 0.907 3.093 12 H -0.279 1.279 13 H -0.292 1.292 14 H -0.291 1.291 15 C -0.141 4.141 16 C 0.092 3.908 17 C -0.123 4.123 18 C -0.159 4.159 19 H 0.028 0.972 20 H 0.059 0.941 21 H 0.062 0.938 22 H 0.070 0.930 23 H 0.044 0.956 24 H 0.384 0.616 25 H 0.255 0.745 26 H 0.065 0.935 27 H 0.069 0.931 28 H 0.051 0.949 29 H 0.050 0.950 30 H 0.059 0.941 31 H 0.056 0.944 32 H 0.057 0.943 33 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.966 -11.590 -2.107 13.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 N -0.251 5.251 3 C -0.112 4.112 4 C 0.064 3.936 5 H 0.082 0.918 6 N -0.356 5.356 7 C -0.371 4.371 8 H 0.091 0.909 9 C -0.210 4.210 10 N -0.581 5.581 11 Si 0.739 3.261 12 H -0.205 1.205 13 H -0.219 1.219 14 H -0.218 1.218 15 C -0.180 4.180 16 C 0.003 3.997 17 C -0.181 4.181 18 C -0.217 4.217 19 H 0.046 0.954 20 H 0.078 0.922 21 H 0.081 0.919 22 H 0.089 0.911 23 H 0.062 0.938 24 H 0.218 0.782 25 H 0.065 0.935 26 H 0.084 0.916 27 H 0.088 0.912 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.078 0.922 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -5.674 -11.738 -2.673 13.308 hybrid contribution 0.061 1.287 0.549 1.400 sum -5.612 -10.451 -2.124 12.051 Atomic orbital electron populations 1.22525 0.89062 1.01016 1.00203 1.63573 1.06955 1.15801 1.38817 1.23966 0.98730 0.87111 1.01377 1.21339 0.93744 0.86415 0.92145 0.91759 1.42356 1.56272 1.13879 1.23133 1.19340 1.20100 0.96025 1.01663 0.90937 1.24765 1.00970 0.98083 0.97158 1.69675 1.48434 1.22355 1.17684 0.86105 0.80209 0.81033 0.78795 1.20457 1.21871 1.21847 1.23131 0.98979 0.97177 0.98750 1.21675 0.94315 0.94621 0.89120 1.21716 0.99703 0.96174 1.00550 1.22341 0.98556 1.01236 0.99603 0.95382 0.92225 0.91938 0.91135 0.93792 0.78211 0.93543 0.91645 0.91230 0.93010 0.93104 0.92167 0.92463 0.92363 0.92462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.29 8.29 60.06 0.50 0.79 16 2 N -0.53 -8.56 5.07 -223.60 -1.13 -9.70 16 3 C 0.02 0.36 6.45 -2.04 -0.01 0.35 16 4 C 0.18 3.65 3.73 -65.54 -0.24 3.40 16 5 H 0.06 1.38 8.09 -51.93 -0.42 0.96 16 6 N -0.72 -18.31 5.25 -51.12 -0.27 -18.58 16 7 C -0.24 -6.73 9.96 -15.06 -0.15 -6.88 16 8 H 0.07 1.98 7.83 -52.48 -0.41 1.57 16 9 C -0.01 -0.40 5.50 -17.43 -0.10 -0.50 16 10 N -0.93 -28.35 13.06 55.49 0.72 -27.63 16 11 Si 0.91 22.53 29.55 -169.99 -5.02 17.50 16 12 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 13 H -0.29 -7.27 7.11 56.52 0.40 -6.87 16 14 H -0.29 -7.26 7.11 56.52 0.40 -6.85 16 15 C -0.14 -2.47 5.64 -24.91 -0.14 -2.61 16 16 C 0.09 1.39 1.16 -130.61 -0.15 1.24 16 17 C -0.12 -1.65 8.70 37.16 0.32 -1.33 16 18 C -0.16 -2.04 7.15 37.16 0.27 -1.78 16 19 H 0.03 0.39 6.43 -51.93 -0.33 0.06 16 20 H 0.06 0.80 8.14 -51.93 -0.42 0.37 16 21 H 0.06 0.75 6.76 -51.93 -0.35 0.40 16 22 H 0.07 1.39 8.14 -51.93 -0.42 0.97 16 23 H 0.04 0.90 7.78 -51.93 -0.40 0.49 16 24 H 0.38 10.40 7.76 -40.82 -0.32 10.09 16 25 H 0.25 7.47 8.31 -40.82 -0.34 7.13 16 26 H 0.06 1.19 7.72 -51.93 -0.40 0.79 16 27 H 0.07 1.17 7.83 -51.93 -0.41 0.76 16 28 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 29 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 30 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 31 H 0.06 0.77 6.61 -51.93 -0.34 0.42 16 32 H 0.06 0.67 6.72 -51.93 -0.35 0.32 16 33 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 LS Contribution 261.54 15.07 3.94 3.94 Total: -1.00 -29.54 261.54 -6.88 -36.41 By element: Atomic # 1 Polarization: 10.78 SS G_CDS: -5.41 Total: 5.37 kcal Atomic # 6 Polarization: -7.62 SS G_CDS: 0.29 Total: -7.32 kcal Atomic # 7 Polarization: -55.23 SS G_CDS: -0.68 Total: -55.91 kcal Atomic # 14 Polarization: 22.53 SS G_CDS: -5.02 Total: 17.50 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -29.54 -6.88 -36.41 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575530489.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.057 kcal (2) G-P(sol) polarization free energy of solvation -29.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.412 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds