Wall clock time and date at job start Mon Mar 30 2020 02:02:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46897 * 110.99790 * 2 1 4 4 C 1.46906 * 110.99886 * 123.94928 * 2 1 3 5 5 C 1.50697 * 110.27332 * 178.18906 * 4 2 1 6 6 H 1.07998 * 119.99564 * 121.97827 * 5 4 2 7 7 C 1.37872 * 120.00055 * 301.96792 * 5 4 2 8 8 N 1.31516 * 120.00100 * 5.20650 * 7 5 4 9 9 Si 1.86800 * 120.00011 * 185.19672 * 7 5 4 10 10 H 1.48504 * 109.47040 * 0.02562 * 9 7 5 11 11 H 1.48504 * 109.47003 * 120.00521 * 9 7 5 12 12 H 1.48498 * 109.47529 * 240.00511 * 9 7 5 13 13 C 1.54596 * 110.30803 * 300.38854 * 4 2 1 14 14 C 1.54943 * 102.92329 * 140.87191 * 13 4 2 15 15 N 1.48534 * 103.22373 * 322.58299 * 14 13 4 16 16 C 1.46896 * 110.99792 * 159.72047 * 15 14 13 17 17 C 1.47903 * 105.82161 * 39.20607 * 15 14 13 18 18 H 1.09000 * 109.47603 * 301.61566 * 1 2 3 19 19 H 1.09002 * 109.46884 * 61.61823 * 1 2 3 20 20 H 1.08998 * 109.46811 * 181.61204 * 1 2 3 21 21 H 1.09001 * 109.47268 * 179.25145 * 3 2 1 22 22 H 1.08993 * 109.47205 * 299.25307 * 3 2 1 23 23 H 1.09000 * 109.47533 * 59.25888 * 3 2 1 24 24 H 0.97001 * 120.00021 * 179.97438 * 8 7 5 25 25 H 1.09004 * 110.71920 * 259.22760 * 13 4 2 26 26 H 1.08996 * 110.72586 * 22.51072 * 13 4 2 27 27 H 1.09002 * 110.66653 * 81.01557 * 14 13 4 28 28 H 1.08998 * 110.66502 * 204.14695 * 14 13 4 29 29 H 1.09004 * 109.47491 * 302.60543 * 16 15 14 30 30 H 1.09002 * 109.47117 * 62.60220 * 16 15 14 31 31 H 1.08995 * 109.47465 * 182.60336 * 16 15 14 32 32 H 1.08999 * 109.91786 * 215.31691 * 17 15 14 33 33 H 1.09000 * 109.91586 * 94.02176 * 17 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9955 -0.7659 1.1377 5 6 3.5016 -0.7925 1.0971 6 1 4.0710 -0.4112 1.9319 7 6 4.1527 -1.3036 -0.0055 8 7 3.4638 -1.6732 -1.0631 9 14 6.0131 -1.4709 0.0027 10 1 6.5478 -0.9888 1.3015 11 1 6.3828 -2.8968 -0.1858 12 1 6.5879 -0.6606 -1.1010 13 6 1.5030 -0.1550 2.4697 14 6 1.2109 -1.4051 3.3373 15 7 0.6464 -2.3718 2.3610 16 6 0.7489 -3.7482 2.8639 17 6 1.4349 -2.2001 1.1216 18 1 -0.3634 0.5387 0.8751 19 1 -0.3633 0.4885 -0.9042 20 1 -0.3633 -1.0273 0.0289 21 1 3.0850 1.3424 0.0134 22 1 1.6568 1.8906 -0.8965 23 1 1.6352 1.8989 0.8832 24 1 3.9219 -2.0325 -1.8390 25 1 2.2820 0.4568 2.9247 26 1 0.5950 0.4276 2.3145 27 1 2.1307 -1.7931 3.7750 28 1 0.4822 -1.1726 4.1138 29 1 1.7922 -3.9799 3.0785 30 1 0.1599 -3.8467 3.7757 31 1 0.3708 -4.4393 2.1106 32 1 0.7934 -2.3383 0.2512 33 1 2.2542 -2.9188 1.1002 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260846898.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:02:21 Heat of formation + Delta-G solvation = 27.033345 kcal Electronic energy + Delta-G solvation = -13930.752864 eV Core-core repulsion = 11799.149811 eV Total energy + Delta-G solvation = -2131.603053 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 198.143 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -38.66651 -35.02152 -32.30246 -30.16081 -27.70839 -26.82489 -25.01359 -23.65662 -22.24094 -20.15121 -18.45016 -16.39755 -15.19169 -14.53732 -14.29169 -13.63530 -13.54614 -13.27688 -12.92413 -12.27021 -11.84355 -11.42440 -11.21355 -10.98179 -10.93476 -10.67146 -10.58266 -10.48973 -10.32509 -10.14715 -9.74622 -9.50185 -8.87016 -8.46749 -7.53520 -6.64604 -5.86843 -4.01895 3.29513 3.38989 3.41698 4.44664 4.95400 5.21872 5.54248 5.80823 5.82911 5.95524 6.11556 6.20227 6.33984 6.36921 6.39520 6.49611 6.57455 6.64566 6.77564 6.83331 6.94301 7.00832 7.08227 7.24489 7.50771 7.70417 7.86761 7.97284 8.24718 8.64566 8.80384 9.11299 9.64001 11.13896 Molecular weight = 198.14amu Principal moments of inertia in cm(-1) A = 0.030666 B = 0.016761 C = 0.013363 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 912.834302 B = 1670.179624 C = 2094.803419 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.496 5.496 3 C 0.050 3.950 4 C 0.242 3.758 5 C -0.528 4.528 6 H 0.055 0.945 7 C 0.084 3.916 8 N -0.837 5.837 9 Si 0.876 3.124 10 H -0.275 1.275 11 H -0.285 1.285 12 H -0.284 1.284 13 C -0.154 4.154 14 C 0.045 3.955 15 N -0.535 5.535 16 C 0.022 3.978 17 C 0.066 3.934 18 H 0.006 0.994 19 H 0.041 0.959 20 H 0.064 0.936 21 H 0.075 0.925 22 H 0.035 0.965 23 H -0.004 1.004 24 H 0.254 0.746 25 H 0.058 0.942 26 H 0.054 0.946 27 H 0.039 0.961 28 H 0.058 0.942 29 H 0.023 0.977 30 H 0.054 0.946 31 H 0.059 0.941 32 H 0.069 0.931 33 H 0.047 0.953 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.553 0.364 4.331 5.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 N -0.218 5.218 3 C -0.099 4.099 4 C 0.153 3.847 5 C -0.567 4.567 6 H 0.073 0.927 7 C -0.124 4.124 8 N -0.470 5.470 9 Si 0.704 3.296 10 H -0.199 1.199 11 H -0.211 1.211 12 H -0.210 1.210 13 C -0.194 4.194 14 C -0.083 4.083 15 N -0.259 5.259 16 C -0.128 4.128 17 C -0.062 4.062 18 H 0.024 0.976 19 H 0.060 0.940 20 H 0.083 0.917 21 H 0.093 0.907 22 H 0.054 0.946 23 H 0.015 0.985 24 H 0.065 0.935 25 H 0.077 0.923 26 H 0.073 0.927 27 H 0.057 0.943 28 H 0.076 0.924 29 H 0.042 0.958 30 H 0.072 0.928 31 H 0.078 0.922 32 H 0.087 0.913 33 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -3.945 0.129 3.576 5.326 hybrid contribution 1.627 0.045 0.818 1.821 sum -2.318 0.174 4.394 4.971 Atomic orbital electron populations 1.22406 0.91528 1.01049 0.97663 1.62246 1.03235 1.11656 1.44690 1.22006 1.01968 0.89401 0.96514 1.19403 0.93991 0.88514 0.82750 1.20884 0.89274 1.43461 1.03048 0.92684 1.24945 0.97039 0.94980 0.95406 1.70173 1.34210 1.39281 1.03359 0.86814 0.87122 0.77717 0.77971 1.19944 1.21114 1.21046 1.23228 0.99620 0.96648 0.99868 1.22990 0.96718 0.93804 0.94793 1.64824 1.52370 1.03464 1.05280 1.22393 0.99206 0.91570 0.99615 1.22945 0.94465 0.99141 0.89631 0.97622 0.94021 0.91736 0.90669 0.94572 0.98518 0.93540 0.92317 0.92736 0.94260 0.92377 0.95812 0.92752 0.92209 0.91317 0.93474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.47 8.90 60.07 0.53 1.00 16 2 N -0.50 -11.85 3.96 -235.16 -0.93 -12.79 16 3 C 0.05 1.11 9.08 60.06 0.55 1.65 16 4 C 0.24 5.84 0.19 -131.39 -0.02 5.81 16 5 C -0.53 -13.95 6.36 -34.44 -0.22 -14.17 16 6 H 0.05 1.48 7.54 -52.49 -0.40 1.08 16 7 C 0.08 2.24 5.04 -17.82 -0.09 2.15 16 8 N -0.84 -23.21 12.09 55.43 0.67 -22.54 16 9 Si 0.88 20.73 29.54 -169.99 -5.02 15.71 16 10 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 11 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 12 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 13 C -0.15 -3.30 4.98 -24.87 -0.12 -3.43 16 14 C 0.05 0.89 6.56 -1.89 -0.01 0.88 16 15 N -0.53 -10.99 5.55 -238.71 -1.33 -12.32 16 16 C 0.02 0.38 9.40 60.06 0.56 0.94 16 17 C 0.07 1.56 4.73 -2.75 -0.01 1.55 16 18 H 0.01 0.11 6.19 -51.93 -0.32 -0.21 16 19 H 0.04 0.81 8.14 -51.93 -0.42 0.38 16 20 H 0.06 1.38 5.98 -51.93 -0.31 1.07 16 21 H 0.07 1.80 6.90 -51.93 -0.36 1.45 16 22 H 0.04 0.73 8.14 -51.93 -0.42 0.31 16 23 H 0.00 -0.07 7.32 -51.93 -0.38 -0.45 16 24 H 0.25 6.82 8.31 -40.82 -0.34 6.48 16 25 H 0.06 1.26 7.67 -51.93 -0.40 0.86 16 26 H 0.05 1.14 5.68 -51.93 -0.30 0.85 16 27 H 0.04 0.79 7.96 -51.93 -0.41 0.38 16 28 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 29 H 0.02 0.42 8.00 -51.93 -0.42 0.01 16 30 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 31 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 32 H 0.07 1.72 6.22 -51.93 -0.32 1.40 16 33 H 0.05 1.23 7.05 -51.93 -0.37 0.86 16 LS Contribution 253.24 15.07 3.82 3.82 Total: -1.00 -27.63 253.24 -6.86 -34.48 By element: Atomic # 1 Polarization: 2.48 SS G_CDS: -5.23 Total: -2.75 kcal Atomic # 6 Polarization: -4.77 SS G_CDS: 1.16 Total: -3.61 kcal Atomic # 7 Polarization: -46.06 SS G_CDS: -1.59 Total: -47.65 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.02 Total: 15.71 kcal Total LS contribution 3.82 Total: 3.82 kcal Total: -27.63 -6.86 -34.48 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260846898.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.518 kcal (2) G-P(sol) polarization free energy of solvation -27.629 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.484 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds