Wall clock time and date at job start Mon Mar 30 2020 02:28:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 O 1.34280 * 125.40589 * 2 1 4 4 C 1.35081 * 109.39717 * 180.02562 * 3 2 1 5 5 C 1.39740 * 126.19044 * 180.02562 * 4 3 2 6 6 H 1.08000 * 120.00194 * 179.97438 * 5 4 3 7 7 C 1.40156 * 119.99964 * 359.97438 * 5 4 3 8 8 N 1.30808 * 120.00045 * 359.97438 * 7 5 4 9 9 Si 1.86800 * 119.99944 * 179.97438 * 7 5 4 10 10 H 1.48502 * 109.47270 * 60.00148 * 9 7 5 11 11 H 1.48504 * 109.47191 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.47183 * 300.00008 * 9 7 5 13 13 C 1.39541 * 107.61943 * 359.75768 * 4 3 2 14 14 C 1.50706 * 126.77028 * 180.24342 * 13 4 3 15 15 C 1.35783 * 125.40028 * 180.02562 * 2 1 3 16 16 Cl 1.73599 * 126.33712 * 359.97276 * 15 2 1 17 17 H 1.08990 * 109.46991 * 270.00230 * 1 2 3 18 18 H 1.09003 * 109.46449 * 30.00384 * 1 2 3 19 19 H 1.09003 * 109.46727 * 149.99729 * 1 2 3 20 20 H 0.96998 * 119.99555 * 179.97438 * 8 7 5 21 21 H 1.08990 * 109.46960 * 270.19291 * 14 13 4 22 22 H 1.09002 * 109.46671 * 30.19217 * 14 13 4 23 23 H 1.09003 * 109.46987 * 150.19253 * 14 13 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.2851 1.0945 0.0000 4 6 3.5835 0.7219 -0.0006 5 6 4.6876 1.5784 -0.0002 6 1 5.6876 1.1704 -0.0004 7 6 4.4974 2.9670 0.0002 8 7 3.2863 3.4613 -0.0002 9 14 5.9734 4.1119 0.0014 10 1 6.7942 3.8627 -1.2109 11 1 5.5064 5.5216 0.0011 12 1 6.7930 3.8617 1.2142 13 6 3.6227 -0.6729 0.0047 14 6 4.8548 -1.5407 0.0112 15 6 2.2937 -1.1068 -0.0005 16 17 1.7496 -2.7553 -0.0006 17 1 -0.3633 0.0000 1.0276 18 1 -0.3632 0.8900 -0.5139 19 1 -0.3633 -0.8900 -0.5139 20 1 3.1547 4.4223 0.0005 21 1 5.1566 -1.7509 -1.0148 22 1 5.6619 -1.0218 0.5283 23 1 4.6369 -2.4771 0.5249 RHF calculation, no. of doubly occupied orbitals= 33 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000213960996.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:28:45 Heat of formation + Delta-G solvation = -28.278988 kcal Electronic energy + Delta-G solvation = -10746.293747 eV Core-core repulsion = 8585.897823 eV Total energy + Delta-G solvation = -2160.395924 eV No. of doubly occupied orbitals = 33 Molecular weight (most abundant/longest-lived isotopes) = 200.034 amu Computer time = 0.10 seconds Orbital eigenvalues (eV) -40.49539 -35.57682 -33.82368 -32.16769 -30.86740 -27.63842 -26.57979 -23.08624 -19.74211 -18.85274 -17.32985 -15.27135 -14.57594 -14.45069 -13.23225 -13.06275 -12.46163 -12.21669 -11.85105 -11.63641 -11.47931 -11.34612 -11.11597 -11.03366 -10.72150 -10.67410 -10.26270 -9.51817 -9.49553 -7.81692 -7.16121 -6.93633 -4.47632 2.85276 2.99153 3.02078 3.30996 3.33247 3.80913 3.81605 4.81214 5.09374 6.00597 6.30696 6.34119 6.38553 6.45821 6.77089 6.78524 6.93648 7.08838 7.13108 7.55398 7.85054 7.96312 8.44256 8.58348 9.11020 10.05356 Molecular weight = 200.03amu Principal moments of inertia in cm(-1) A = 0.054283 B = 0.011411 C = 0.009494 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 515.690526 B = 2453.157429 C = 2948.398437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 C -0.141 4.141 3 O -0.144 6.144 4 C 0.219 3.781 5 C -0.436 4.436 6 H 0.106 0.894 7 C 0.067 3.933 8 N -0.774 5.774 9 Si 0.924 3.076 10 H -0.261 1.261 11 H -0.276 1.276 12 H -0.261 1.261 13 C -0.364 4.364 14 C -0.037 4.037 15 C -0.062 4.062 16 Cl -0.095 7.095 17 H 0.055 0.945 18 H 0.059 0.941 19 H 0.065 0.935 20 H 0.286 0.714 21 H 0.033 0.967 22 H 0.046 0.954 23 H 0.038 0.962 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.429 -2.330 0.014 2.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.190 4.190 3 O -0.041 6.041 4 C 0.167 3.833 5 C -0.466 4.466 6 H 0.124 0.876 7 C -0.154 4.154 8 N -0.400 5.400 9 Si 0.748 3.252 10 H -0.186 1.186 11 H -0.201 1.201 12 H -0.186 1.186 13 C -0.367 4.367 14 C -0.093 4.093 15 C -0.089 4.089 16 Cl -0.067 7.067 17 H 0.074 0.926 18 H 0.078 0.922 19 H 0.084 0.916 20 H 0.097 0.903 21 H 0.051 0.949 22 H 0.065 0.935 23 H 0.057 0.943 Dipole moment (debyes) X Y Z Total from point charges -0.759 -1.996 0.014 2.136 hybrid contribution 0.525 0.235 -0.002 0.575 sum -0.234 -1.762 0.012 1.777 Atomic orbital electron populations 1.19814 0.87669 1.01699 1.01096 1.21374 0.92868 0.84247 1.20515 1.84494 1.16137 1.29936 1.73581 1.19210 0.81483 0.90342 0.92292 1.18704 0.92258 0.89680 1.45920 0.87638 1.26152 0.97586 0.99410 0.92287 1.69761 1.22378 1.15204 1.32661 0.86088 0.80742 0.78202 0.80194 1.18586 1.20079 1.18585 1.19651 0.92362 0.92919 1.31780 1.19532 0.94411 0.96518 0.98888 1.20285 0.94014 0.82501 1.12142 1.98199 1.90192 1.20624 1.97692 0.92639 0.92157 0.91611 0.90286 0.94868 0.93511 0.94346 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.90 10.24 36.01 0.37 -0.54 14 2 C -0.14 -3.50 7.32 -35.18 -0.26 -3.76 14 3 O -0.14 -4.06 8.97 3.59 0.03 -4.03 14 4 C 0.22 6.09 6.79 -38.53 -0.26 5.83 14 5 C -0.44 -11.51 9.07 -38.30 -0.35 -11.85 14 6 H 0.11 2.58 7.31 -52.49 -0.38 2.20 14 7 C 0.07 1.66 5.50 -17.27 -0.09 1.57 14 8 N -0.77 -20.27 12.01 55.56 0.67 -19.60 14 9 Si 0.92 18.16 29.56 -169.99 -5.03 13.14 14 10 H -0.26 -5.04 7.11 56.52 0.40 -4.64 14 11 H -0.28 -5.27 7.11 56.52 0.40 -4.87 14 12 H -0.26 -5.03 7.11 56.52 0.40 -4.63 14 13 C -0.36 -9.37 6.28 -103.55 -0.65 -10.02 14 14 C -0.04 -0.80 10.07 36.01 0.36 -0.44 14 15 C -0.06 -1.51 6.67 -39.87 -0.27 -1.78 14 16 Cl -0.10 -1.94 28.72 -51.86 -1.49 -3.43 14 17 H 0.05 1.00 8.14 -51.93 -0.42 0.58 14 18 H 0.06 1.12 8.14 -51.93 -0.42 0.70 14 19 H 0.07 1.16 7.87 -51.93 -0.41 0.75 14 20 H 0.29 6.74 8.30 -40.82 -0.34 6.40 14 21 H 0.03 0.69 8.14 -51.93 -0.42 0.26 14 22 H 0.05 0.98 7.58 -51.93 -0.39 0.58 14 23 H 0.04 0.78 8.13 -51.93 -0.42 0.36 14 LS Contribution 226.13 15.07 3.41 3.41 Total: -1.00 -28.25 226.13 -5.56 -33.82 By element: Atomic # 1 Polarization: -0.30 SS G_CDS: -2.01 Total: -2.31 kcal Atomic # 6 Polarization: -19.85 SS G_CDS: -1.15 Total: -20.99 kcal Atomic # 7 Polarization: -20.27 SS G_CDS: 0.67 Total: -19.60 kcal Atomic # 8 Polarization: -4.06 SS G_CDS: 0.03 Total: -4.03 kcal Atomic # 14 Polarization: 18.16 SS G_CDS: -5.03 Total: 13.14 kcal Atomic # 17 Polarization: -1.94 SS G_CDS: -1.49 Total: -3.43 kcal Total LS contribution 3.41 Total: 3.41 kcal Total: -28.25 -5.56 -33.82 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000213960996.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.537 kcal (2) G-P(sol) polarization free energy of solvation -28.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.816 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.10 seconds