Wall clock time and date at job start Mon Mar 30 2020 02:21:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 114.00018 * 2 1 4 4 C 1.53005 * 109.47490 * 179.97438 * 3 2 1 5 5 H 1.09001 * 109.46013 * 305.02261 * 4 3 2 6 6 C 1.53032 * 109.45593 * 185.04788 * 4 3 2 7 7 C 1.53122 * 109.27974 * 180.81003 * 6 4 3 8 8 H 1.08996 * 109.57442 * 177.58728 * 7 6 4 9 9 C 1.50697 * 109.51862 * 297.75162 * 7 6 4 10 10 H 1.08002 * 120.00599 * 359.68326 * 9 7 6 11 11 C 1.37880 * 119.99675 * 179.67859 * 9 7 6 12 12 N 1.31517 * 120.00210 * 179.97438 * 11 9 7 13 13 Si 1.86800 * 120.00019 * 0.02562 * 11 9 7 14 14 H 1.48503 * 109.46845 * 269.99914 * 13 11 9 15 15 H 1.48503 * 109.47399 * 29.99403 * 13 11 9 16 16 H 1.48498 * 109.47295 * 150.00010 * 13 11 9 17 17 C 1.53126 * 109.15610 * 57.65351 * 7 6 4 18 18 C 1.53031 * 109.27854 * 302.34480 * 17 7 6 19 19 N 1.46847 * 109.52436 * 59.18515 * 18 17 7 20 20 H 1.08998 * 109.47426 * 179.97438 * 1 2 3 21 21 H 1.08998 * 109.47583 * 300.00550 * 1 2 3 22 22 H 1.09001 * 109.46858 * 60.00089 * 1 2 3 23 23 H 1.09001 * 109.47125 * 59.99438 * 3 2 1 24 24 H 1.08997 * 109.47155 * 299.99820 * 3 2 1 25 25 H 1.09005 * 109.50214 * 60.86680 * 6 4 3 26 26 H 1.09000 * 109.50401 * 300.75430 * 6 4 3 27 27 H 0.96998 * 119.99640 * 180.02562 * 12 11 9 28 28 H 1.09002 * 109.50226 * 62.28910 * 17 7 6 29 29 H 1.08999 * 109.49625 * 182.36427 * 17 7 6 30 30 H 1.09003 * 109.46281 * 179.19790 * 18 17 7 31 31 H 1.09004 * 109.46968 * 299.16546 * 18 17 7 32 32 H 1.00896 * 111.00495 * 62.35184 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 1 3.8506 0.5683 0.8425 6 6 4.1570 2.5774 0.1276 7 6 5.6831 2.4538 0.1075 8 1 6.1305 3.4465 0.1545 9 6 6.1379 1.6396 1.2912 10 1 5.4124 1.2531 1.9917 11 6 7.4803 1.3879 1.4799 12 7 7.8774 0.6778 2.5132 13 14 8.7353 2.0569 0.2686 14 1 8.9557 1.0648 -0.8142 15 1 8.2310 3.3249 -0.3171 16 1 10.0167 2.3126 0.9741 17 6 6.1139 1.7591 -1.1874 18 6 5.4357 0.3902 -1.2761 19 7 3.9775 0.5625 -1.2539 20 1 -0.3634 -1.0276 -0.0005 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 1.6885 1.8464 0.8899 24 1 1.6886 1.8463 -0.8900 25 1 3.8411 3.0327 1.0663 26 1 3.8312 3.1987 -0.7066 27 1 8.8219 0.5011 2.6460 28 1 5.8189 2.3676 -2.0423 29 1 7.1963 1.6305 -1.1884 30 1 5.7292 -0.1011 -2.2039 31 1 5.7419 -0.2226 -0.4283 32 1 3.6641 1.0950 -2.0516 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261258340.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:21:54 Heat of formation + Delta-G solvation = -50.414262 kcal Electronic energy + Delta-G solvation = -13480.462301 eV Core-core repulsion = 11247.782205 eV Total energy + Delta-G solvation = -2232.680095 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 199.131 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -38.67445 -36.99069 -32.94205 -31.12860 -30.74933 -26.99698 -25.27722 -24.63371 -22.12004 -20.87374 -19.14064 -16.38679 -15.90187 -15.64024 -15.43443 -14.67288 -13.96558 -13.68460 -13.48393 -12.83230 -12.75382 -12.15292 -11.89180 -11.42136 -11.29732 -11.07710 -10.74582 -10.37921 -10.12668 -9.92023 -9.82680 -9.35586 -9.24330 -8.92594 -8.53518 -7.52164 -6.06320 -4.04654 3.26216 3.36908 3.38940 4.11677 4.40936 4.89935 5.25046 5.35111 5.45164 5.58818 5.64829 5.77443 5.81267 5.89305 6.02376 6.08300 6.16858 6.22997 6.51228 6.60950 6.72503 6.91892 7.05032 7.12487 7.34878 7.52064 7.77623 7.81688 8.15940 8.52246 8.97157 9.56195 11.06605 Molecular weight = 199.13amu Principal moments of inertia in cm(-1) A = 0.054714 B = 0.010236 C = 0.009683 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 511.627291 B = 2734.876204 C = 2890.868259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.373 6.373 3 C 0.070 3.930 4 C 0.096 3.904 5 H 0.102 0.898 6 C -0.125 4.125 7 C 0.011 3.989 8 H 0.026 0.974 9 C -0.507 4.507 10 H 0.075 0.925 11 C 0.070 3.930 12 N -0.900 5.900 13 Si 0.886 3.114 14 H -0.279 1.279 15 H -0.269 1.269 16 H -0.299 1.299 17 C -0.156 4.156 18 C 0.070 3.930 19 N -0.671 5.671 20 H 0.080 0.920 21 H 0.034 0.966 22 H 0.034 0.966 23 H 0.048 0.952 24 H 0.039 0.961 25 H 0.060 0.940 26 H 0.037 0.963 27 H 0.263 0.737 28 H 0.033 0.967 29 H 0.050 0.950 30 H 0.052 0.948 31 H 0.090 0.910 32 H 0.321 0.679 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.744 2.084 -6.911 12.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.292 6.292 3 C -0.007 4.007 4 C -0.015 4.015 5 H 0.120 0.880 6 C -0.164 4.164 7 C -0.008 4.008 8 H 0.044 0.956 9 C -0.545 4.545 10 H 0.094 0.906 11 C -0.131 4.131 12 N -0.538 5.538 13 Si 0.717 3.283 14 H -0.206 1.206 15 H -0.194 1.194 16 H -0.226 1.226 17 C -0.195 4.195 18 C -0.059 4.059 19 N -0.298 5.298 20 H 0.099 0.901 21 H 0.053 0.947 22 H 0.052 0.948 23 H 0.066 0.934 24 H 0.057 0.943 25 H 0.079 0.921 26 H 0.056 0.944 27 H 0.073 0.927 28 H 0.052 0.948 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.108 0.892 32 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -9.603 1.176 -6.584 11.702 hybrid contribution 0.945 1.572 -0.757 1.984 sum -8.658 2.747 -7.341 11.679 Atomic orbital electron populations 1.22682 0.82593 1.02145 0.99219 1.88036 1.18103 1.27890 1.95146 1.22687 0.94587 0.84340 0.99078 1.21534 0.90091 0.95208 0.94617 0.88011 1.22015 0.98381 0.95946 1.00103 1.19183 0.91421 0.96438 0.93736 0.95562 1.20982 0.92979 1.32446 1.08101 0.90649 1.25006 0.98389 0.94599 0.95149 1.69901 1.15872 1.39235 1.28765 0.86864 0.80594 0.79914 0.80904 1.20585 1.19445 1.22630 1.22565 1.00060 0.98305 0.98619 1.21868 0.86065 0.96403 1.01607 1.60722 1.12536 1.53288 1.03268 0.90119 0.94699 0.94753 0.93394 0.94277 0.92142 0.94430 0.92719 0.94812 0.93188 0.92907 0.89191 0.86301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.37 11.01 101.05 1.11 1.49 16 2 O -0.37 -6.33 10.65 -35.23 -0.38 -6.70 16 3 C 0.07 1.13 5.51 37.16 0.20 1.33 16 4 C 0.10 1.83 2.49 -67.72 -0.17 1.66 16 5 H 0.10 2.32 6.78 -51.93 -0.35 1.97 16 6 C -0.13 -2.44 4.82 -26.65 -0.13 -2.57 16 7 C 0.01 0.26 2.19 -91.65 -0.20 0.06 16 8 H 0.03 0.63 7.21 -51.93 -0.37 0.26 16 9 C -0.51 -13.85 7.32 -34.44 -0.25 -14.10 16 10 H 0.08 2.24 7.12 -52.49 -0.37 1.87 16 11 C 0.07 1.99 5.45 -17.82 -0.10 1.90 16 12 N -0.90 -27.35 13.96 55.43 0.77 -26.58 16 13 Si 0.89 22.01 24.39 -169.99 -4.15 17.86 16 14 H -0.28 -6.75 6.85 56.52 0.39 -6.37 16 15 H -0.27 -6.46 6.53 56.52 0.37 -6.09 16 16 H -0.30 -7.47 7.11 56.52 0.40 -7.07 16 17 C -0.16 -3.36 5.08 -26.65 -0.14 -3.49 16 18 C 0.07 1.43 6.35 -3.84 -0.02 1.41 16 19 N -0.67 -12.63 6.45 -106.76 -0.69 -13.32 16 20 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 21 H 0.03 0.38 8.14 -51.93 -0.42 -0.04 16 22 H 0.03 0.37 8.14 -51.93 -0.42 -0.05 16 23 H 0.05 0.72 8.14 -51.93 -0.42 0.29 16 24 H 0.04 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 26 H 0.04 0.65 8.14 -51.93 -0.42 0.22 16 27 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 28 H 0.03 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.05 1.15 3.25 -51.93 -0.17 0.98 16 30 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 31 H 0.09 2.13 7.31 -51.93 -0.38 1.75 16 32 H 0.32 5.37 8.79 -39.29 -0.35 5.03 16 LS Contribution 248.20 15.07 3.74 3.74 Total: -1.00 -29.91 248.20 -5.37 -35.28 By element: Atomic # 1 Polarization: 7.03 SS G_CDS: -4.98 Total: 2.05 kcal Atomic # 6 Polarization: -12.63 SS G_CDS: 0.31 Total: -12.32 kcal Atomic # 7 Polarization: -39.98 SS G_CDS: 0.08 Total: -39.90 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -0.38 Total: -6.70 kcal Atomic # 14 Polarization: 22.01 SS G_CDS: -4.15 Total: 17.86 kcal Total LS contribution 3.74 Total: 3.74 kcal Total: -29.91 -5.37 -35.28 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261258340.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.135 kcal (2) G-P(sol) polarization free energy of solvation -29.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.048 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds