Wall clock time and date at job start Mon Mar 30 2020 02:30:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08998 * 109.46699 * 2 1 4 4 C 1.50703 * 109.47325 * 119.99672 * 2 1 3 5 5 H 1.07999 * 119.99847 * 119.99718 * 4 2 1 6 6 C 1.37882 * 119.99964 * 300.00570 * 4 2 1 7 7 N 1.31509 * 119.99616 * 179.97438 * 6 4 2 8 8 Si 1.86796 * 119.99891 * 359.97438 * 6 4 2 9 9 H 1.48494 * 109.47423 * 90.00334 * 8 6 4 10 10 H 1.48504 * 109.47172 * 210.00465 * 8 6 4 11 11 H 1.48499 * 109.47656 * 330.00120 * 8 6 4 12 12 C 1.50698 * 109.47435 * 239.99951 * 2 1 3 13 13 C 1.34496 * 126.57163 * 300.18348 * 12 2 1 14 14 O 1.34371 * 108.44000 * 180.24078 * 13 12 2 15 15 C 1.34302 * 109.47712 * 359.74223 * 14 13 12 16 16 Cl 1.73597 * 125.79824 * 180.02562 * 15 14 13 17 17 C 1.34654 * 108.39989 * 359.97438 * 15 14 13 18 18 H 1.08994 * 109.47199 * 60.00081 * 1 2 3 19 19 H 1.08998 * 109.46960 * 180.02562 * 1 2 3 20 20 H 1.09003 * 109.47351 * 299.99969 * 1 2 3 21 21 H 0.97008 * 119.99657 * 179.97438 * 7 6 4 22 22 H 1.07999 * 125.77450 * 359.97438 * 13 12 2 23 23 H 1.08002 * 126.58251 * 179.97438 * 17 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7103 1.2305 5 1 2.6533 -1.5885 1.1314 6 6 1.6992 -0.2393 2.4828 7 7 2.1373 -0.8595 3.5565 8 14 0.6258 1.2798 2.6541 9 1 -0.8021 0.8744 2.6993 10 1 0.9770 1.9955 3.9070 11 1 0.8489 2.1773 1.4923 12 6 2.0324 -0.7104 -1.2304 13 6 1.7876 -1.9873 -1.5746 14 8 2.4159 -2.2428 -2.7346 15 6 3.0610 -1.1393 -3.1469 16 17 4.0074 -0.9979 -4.5954 17 6 2.8481 -0.1611 -2.2465 18 1 -0.3633 0.5138 -0.8899 19 1 -0.3633 -1.0277 0.0005 20 1 -0.3634 0.5138 0.8900 21 1 1.9032 -0.5278 4.4376 22 1 1.1909 -2.6897 -1.0116 23 1 3.2313 0.8478 -2.2893 RHF calculation, no. of doubly occupied orbitals= 33 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261283916.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:17 Heat of formation + Delta-G solvation = 9.408361 kcal Electronic energy + Delta-G solvation = -10603.922124 eV Core-core repulsion = 8445.160446 eV Total energy + Delta-G solvation = -2158.761678 eV No. of doubly occupied orbitals = 33 Molecular weight (most abundant/longest-lived isotopes) = 200.034 amu Computer time = 0.09 seconds Orbital eigenvalues (eV) -42.08028 -36.71794 -35.21980 -32.28745 -30.69130 -28.14729 -25.10039 -22.52002 -21.17582 -19.35453 -16.96734 -16.58839 -15.73392 -14.86891 -14.45589 -13.49229 -12.89453 -12.65942 -12.33274 -12.10276 -11.92776 -11.44510 -11.07116 -11.02956 -10.43647 -10.05549 -9.50903 -9.33393 -8.87449 -8.60446 -7.83073 -6.11804 -4.12134 1.55908 2.06163 3.18874 3.24823 3.35219 3.37510 4.06902 4.36598 5.20060 5.43523 5.67650 5.95302 6.19568 6.34168 6.43825 6.52172 6.63361 6.93110 7.02440 7.33557 7.57557 7.68919 8.46686 8.91878 9.49065 11.01006 Molecular weight = 200.03amu Principal moments of inertia in cm(-1) A = 0.067552 B = 0.008881 C = 0.008679 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 414.396055 B = 3151.989435 C = 3225.492269 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.066 3.934 3 H 0.038 0.962 4 C -0.512 4.512 5 H 0.076 0.924 6 C 0.071 3.929 7 N -0.898 5.898 8 Si 0.889 3.111 9 H -0.279 1.279 10 H -0.297 1.297 11 H -0.266 1.266 12 C -0.118 4.118 13 C -0.031 4.031 14 O -0.180 6.180 15 C 0.001 3.999 16 Cl 0.001 6.999 17 C -0.168 4.168 18 H 0.031 0.969 19 H 0.052 0.948 20 H 0.042 0.958 21 H 0.265 0.735 22 H 0.210 0.790 23 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.587 1.050 -11.789 11.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C 0.048 3.952 3 H 0.056 0.944 4 C -0.550 4.550 5 H 0.094 0.906 6 C -0.131 4.131 7 N -0.536 5.536 8 Si 0.719 3.281 9 H -0.206 1.206 10 H -0.225 1.225 11 H -0.191 1.191 12 C -0.119 4.119 13 C -0.098 4.098 14 O -0.079 6.079 15 C -0.074 4.074 16 Cl 0.030 6.970 17 C -0.188 4.188 18 H 0.050 0.950 19 H 0.071 0.929 20 H 0.060 0.940 21 H 0.075 0.925 22 H 0.227 0.773 23 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.495 0.787 -11.869 11.906 hybrid contribution -0.415 0.865 0.208 0.981 sum -0.909 1.652 -11.662 11.813 Atomic orbital electron populations 1.22163 0.98349 1.00860 0.98745 1.17782 0.91568 0.95955 0.89939 0.94436 1.20986 1.32245 1.13696 0.88097 0.90625 1.25003 0.95707 0.96650 0.95769 1.69890 1.45446 1.40308 0.97959 0.86828 0.80529 0.83745 0.76981 1.20556 1.22473 1.19099 1.20687 0.99405 0.94351 0.97467 1.23925 1.01786 0.98599 0.85450 1.83899 1.52784 1.35440 1.35727 1.22158 1.03589 0.87879 0.93823 1.98371 1.68455 1.96651 1.33564 1.21519 1.03302 0.99817 0.94194 0.94962 0.92856 0.93968 0.92549 0.77318 0.83115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.01 8.55 37.16 0.32 -2.69 14 2 C 0.07 1.53 2.27 -92.92 -0.21 1.32 14 3 H 0.04 0.88 7.19 -51.93 -0.37 0.51 14 4 C -0.51 -13.97 8.99 -34.44 -0.31 -14.28 14 5 H 0.08 2.25 7.96 -52.49 -0.42 1.83 14 6 C 0.07 1.99 5.45 -17.82 -0.10 1.89 14 7 N -0.90 -26.96 13.96 55.43 0.77 -26.19 14 8 Si 0.89 21.42 24.37 -169.99 -4.14 17.28 14 9 H -0.28 -6.52 6.87 56.52 0.39 -6.13 14 10 H -0.30 -7.21 7.11 56.52 0.40 -6.81 14 11 H -0.27 -6.13 6.53 56.52 0.37 -5.76 14 12 C -0.12 -2.41 4.84 -104.74 -0.51 -2.92 14 13 C -0.03 -0.59 11.53 29.41 0.34 -0.25 14 14 O -0.18 -3.28 10.65 5.53 0.06 -3.22 14 15 C 0.00 0.02 7.93 29.46 0.23 0.25 14 16 Cl 0.00 0.02 29.30 -51.86 -1.52 -1.50 14 17 C -0.17 -3.08 10.83 -39.65 -0.43 -3.51 14 18 H 0.03 0.59 8.14 -51.93 -0.42 0.16 14 19 H 0.05 1.05 8.02 -51.93 -0.42 0.63 14 20 H 0.04 0.92 3.27 -51.93 -0.17 0.75 14 21 H 0.26 7.46 8.31 -40.82 -0.34 7.12 14 22 H 0.21 3.50 8.06 -52.49 -0.42 3.08 14 23 H 0.15 2.46 8.06 -52.49 -0.42 2.04 14 LS Contribution 218.20 15.07 3.29 3.29 Total: -1.00 -29.08 218.20 -4.03 -33.12 By element: Atomic # 1 Polarization: -0.75 SS G_CDS: -1.83 Total: -2.58 kcal Atomic # 6 Polarization: -19.53 SS G_CDS: -0.66 Total: -20.19 kcal Atomic # 7 Polarization: -26.96 SS G_CDS: 0.77 Total: -26.19 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: 0.06 Total: -3.22 kcal Atomic # 14 Polarization: 21.42 SS G_CDS: -4.14 Total: 17.28 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -1.52 Total: -1.50 kcal Total LS contribution 3.29 Total: 3.29 kcal Total: -29.08 -4.03 -33.12 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261283916.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.524 kcal (2) G-P(sol) polarization free energy of solvation -29.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.032 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.116 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.10 seconds