Wall clock time and date at job start Mon Mar 30 2020 02:30:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 H 1.09003 * 109.47296 * 2 1 4 4 C 1.50700 * 109.47482 * 120.00001 * 2 1 3 5 5 H 1.08001 * 120.00041 * 119.99683 * 4 2 1 6 6 C 1.37884 * 119.99667 * 300.00569 * 4 2 1 7 7 N 1.31509 * 119.99960 * 359.97438 * 6 4 2 8 8 Si 1.86806 * 119.99632 * 179.97438 * 6 4 2 9 9 H 1.48499 * 109.46881 * 89.99502 * 8 6 4 10 10 H 1.48496 * 109.46922 * 209.99804 * 8 6 4 11 11 H 1.48500 * 109.47054 * 329.99950 * 8 6 4 12 12 C 1.50700 * 109.47342 * 240.00244 * 2 1 3 13 13 C 1.41410 * 126.58273 * 299.71596 * 12 2 1 14 14 C 1.34492 * 106.85027 * 180.26285 * 13 12 2 15 15 O 1.34375 * 108.44446 * 359.97438 * 14 13 12 16 16 C 1.34298 * 109.47652 * 0.02562 * 15 14 13 17 17 Cl 1.73602 * 125.80297 * 179.97438 * 16 15 14 18 18 H 1.09003 * 109.47296 * 179.97438 * 1 2 3 19 19 H 1.09004 * 109.47258 * 300.00087 * 1 2 3 20 20 H 1.09001 * 109.47176 * 60.00014 * 1 2 3 21 21 H 0.97004 * 119.99950 * 180.02562 * 7 6 4 22 22 H 1.07994 * 126.57428 * 0.25407 * 13 12 2 23 23 H 1.08003 * 125.77548 * 180.02562 * 14 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7104 1.2304 5 1 2.6532 -1.5885 1.1313 6 6 1.6992 -0.2393 2.4827 7 7 0.9434 0.8301 2.6034 8 14 2.3214 -1.1203 4.0080 9 1 3.6297 -0.5459 4.4123 10 1 1.3431 -0.9493 5.1120 11 1 2.4860 -2.5662 3.7119 12 6 2.0323 -0.7103 -1.2305 13 6 1.7826 -2.0555 -1.5881 14 6 2.4217 -2.2748 -2.7509 15 8 3.0419 -1.1400 -3.1158 16 6 2.8097 -0.1877 -2.1978 17 17 3.4100 1.4404 -2.2492 18 1 -0.3634 -1.0277 -0.0005 19 1 -0.3634 0.5139 0.8900 20 1 -0.3633 0.5138 -0.8900 21 1 0.7093 1.1617 3.4844 22 1 1.1921 -2.7697 -1.0336 23 1 2.4336 -3.2053 -3.2991 RHF calculation, no. of doubly occupied orbitals= 33 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261287492.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:20 Heat of formation + Delta-G solvation = 2.542983 kcal Electronic energy + Delta-G solvation = -10728.149181 eV Core-core repulsion = 8569.089798 eV Total energy + Delta-G solvation = -2159.059383 eV No. of doubly occupied orbitals = 33 Molecular weight (most abundant/longest-lived isotopes) = 200.034 amu Computer time = 0.10 seconds Orbital eigenvalues (eV) -41.92754 -36.29472 -34.92196 -32.19262 -29.92221 -28.00982 -25.10010 -22.18106 -20.87638 -19.30155 -16.99294 -16.08791 -15.52965 -14.78161 -14.28827 -13.27002 -12.71703 -12.35195 -11.82744 -11.56351 -11.41641 -10.91062 -10.89209 -10.66538 -10.39408 -10.06461 -9.64991 -9.18471 -8.72231 -8.35080 -7.65969 -5.99029 -4.05106 1.92350 2.21335 3.30398 3.31902 3.38097 3.42899 4.21207 4.44976 5.31668 5.57893 5.62601 6.31670 6.44982 6.59623 6.89895 6.97585 7.16281 7.33336 7.52851 7.73047 7.97296 8.10716 8.41353 8.96601 9.58852 11.07016 Molecular weight = 200.03amu Principal moments of inertia in cm(-1) A = 0.040394 B = 0.011739 C = 0.010781 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 693.011423 B = 2384.597229 C = 2596.546096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.093 3.907 3 H 0.043 0.957 4 C -0.505 4.505 5 H 0.056 0.944 6 C 0.062 3.938 7 N -0.890 5.890 8 Si 0.893 3.107 9 H -0.281 1.281 10 H -0.286 1.286 11 H -0.274 1.274 12 C -0.081 4.081 13 C -0.187 4.187 14 C -0.051 4.051 15 O -0.186 6.186 16 C -0.019 4.019 17 Cl 0.008 6.992 18 H 0.027 0.973 19 H 0.086 0.914 20 H 0.008 0.992 21 H 0.261 0.739 22 H 0.150 0.850 23 H 0.202 0.798 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.745 -2.988 -7.879 8.605 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.075 3.925 3 H 0.061 0.939 4 C -0.543 4.543 5 H 0.074 0.926 6 C -0.139 4.139 7 N -0.529 5.529 8 Si 0.721 3.279 9 H -0.207 1.207 10 H -0.212 1.212 11 H -0.199 1.199 12 C -0.083 4.083 13 C -0.207 4.207 14 C -0.118 4.118 15 O -0.085 6.085 16 C -0.093 4.093 17 Cl 0.037 6.963 18 H 0.046 0.954 19 H 0.105 0.895 20 H 0.027 0.973 21 H 0.071 0.929 22 H 0.168 0.832 23 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges 1.885 -2.674 -7.990 8.633 hybrid contribution 0.358 -0.417 0.929 1.080 sum 2.244 -3.091 -7.060 8.027 Atomic orbital electron populations 1.21736 0.97494 0.99232 1.00271 1.17458 0.92743 0.95373 0.86926 0.93925 1.21046 1.31087 1.12377 0.89781 0.92552 1.24939 0.95079 0.95033 0.98870 1.69883 1.36711 1.22887 1.23395 0.86573 0.78593 0.80063 0.82662 1.20691 1.21231 1.19937 1.21055 0.96492 0.93910 0.96871 1.21723 1.04557 0.97223 0.97157 1.23843 1.00229 0.88778 0.98992 1.83837 1.61022 1.18999 1.44671 1.22149 1.07824 0.85723 0.93601 1.98363 1.87767 1.12231 1.97988 0.95358 0.89502 0.97292 0.92946 0.83176 0.78174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -3.16 8.87 37.15 0.33 -2.83 14 2 C 0.09 2.38 2.66 -92.93 -0.25 2.13 14 3 H 0.04 1.16 7.40 -51.93 -0.38 0.78 14 4 C -0.50 -13.87 8.44 -34.44 -0.29 -14.16 14 5 H 0.06 1.55 7.74 -52.49 -0.41 1.14 14 6 C 0.06 1.70 5.30 -17.82 -0.09 1.61 14 7 N -0.89 -25.26 11.32 55.43 0.63 -24.63 14 8 Si 0.89 21.25 29.54 -169.99 -5.02 16.23 14 9 H -0.28 -6.67 7.11 56.52 0.40 -6.27 14 10 H -0.29 -6.75 7.11 56.52 0.40 -6.34 14 11 H -0.27 -6.44 7.11 56.52 0.40 -6.04 14 12 C -0.08 -1.81 4.78 -104.68 -0.50 -2.31 14 13 C -0.19 -3.60 10.53 -39.70 -0.42 -4.01 14 14 C -0.05 -0.83 12.09 29.41 0.36 -0.48 14 15 O -0.19 -3.48 10.65 5.53 0.06 -3.42 14 16 C -0.02 -0.39 7.93 29.46 0.23 -0.16 14 17 Cl 0.01 0.15 28.53 -51.86 -1.48 -1.33 14 18 H 0.03 0.65 8.06 -51.93 -0.42 0.23 14 19 H 0.09 2.30 6.07 -51.93 -0.32 1.99 14 20 H 0.01 0.18 8.14 -51.93 -0.42 -0.24 14 21 H 0.26 7.05 8.31 -40.82 -0.34 6.71 14 22 H 0.15 2.70 8.06 -52.49 -0.42 2.28 14 23 H 0.20 2.21 8.06 -52.48 -0.42 1.79 14 LS Contribution 223.79 15.07 3.37 3.37 Total: -1.00 -28.97 223.79 -5.00 -33.97 By element: Atomic # 1 Polarization: -2.05 SS G_CDS: -1.93 Total: -3.98 kcal Atomic # 6 Polarization: -19.57 SS G_CDS: -0.63 Total: -20.20 kcal Atomic # 7 Polarization: -25.26 SS G_CDS: 0.63 Total: -24.63 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: 0.06 Total: -3.42 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 17 Polarization: 0.15 SS G_CDS: -1.48 Total: -1.33 kcal Total LS contribution 3.37 Total: 3.37 kcal Total: -28.97 -5.00 -33.97 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261287492.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.513 kcal (2) G-P(sol) polarization free energy of solvation -28.970 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.970 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.10 seconds