Wall clock time and date at job start Mon Mar 30 2020 02:02:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43204 * 179.97438 * 2 1 4 4 C 1.40090 * 119.92672 * 236.69223 * 3 2 1 5 5 C 1.36395 * 120.24743 * 179.75979 * 4 3 2 6 6 F 1.35097 * 119.95644 * 180.27560 * 5 4 3 7 7 C 1.41284 * 120.08847 * 0.51183 * 5 4 3 8 8 C 1.40914 * 120.07397 * 179.75936 * 7 5 4 9 9 H 1.08008 * 120.00096 * 25.74906 * 8 7 5 10 10 C 1.40165 * 120.00016 * 205.46918 * 8 7 5 11 11 N 1.30692 * 120.00333 * 16.69327 * 10 8 7 12 12 Si 1.86802 * 120.00024 * 196.68809 * 10 8 7 13 13 H 1.48502 * 109.46982 * 90.00191 * 12 10 8 14 14 H 1.48501 * 109.47299 * 210.00165 * 12 10 8 15 15 H 1.48506 * 109.47188 * 330.00368 * 12 10 8 16 16 C 1.40778 * 119.85060 * 359.48963 * 7 5 4 17 17 C 1.37770 * 119.75535 * 0.24831 * 16 7 5 18 18 O 1.35773 * 120.04263 * 179.97438 * 17 16 7 19 19 H 1.08003 * 119.87065 * 359.97438 * 4 3 2 20 20 H 0.97000 * 120.00896 * 179.97438 * 11 10 8 21 21 H 1.08001 * 120.12225 * 180.23000 * 16 7 5 22 22 H 0.96695 * 114.00169 * 90.00419 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2666 0.6677 1.0147 5 6 4.6305 0.6683 1.0238 6 9 5.2983 1.3088 2.0082 7 6 5.3460 0.0044 0.0023 8 6 6.7551 0.0096 0.0092 9 1 7.2902 0.1302 0.9397 10 6 7.4624 -0.1477 -1.1906 11 7 6.8553 0.0264 -2.3348 12 14 9.2730 -0.6060 -1.1543 13 1 9.4096 -2.0847 -1.1691 14 1 9.9523 -0.0342 -2.3446 15 1 9.8963 -0.0636 0.0796 16 6 4.6480 -0.6672 -1.0193 17 6 3.2703 -0.6684 -1.0194 18 8 2.5912 -1.3138 -2.0021 19 1 2.7231 1.1803 1.7945 20 1 7.3448 -0.0821 -3.1652 21 1 5.1905 -1.1793 -1.8002 22 1 2.3950 -2.2393 -1.8021 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575650487.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:02:08 Heat of formation + Delta-G solvation = -54.218742 kcal Electronic energy + Delta-G solvation = -12531.389267 eV Core-core repulsion = 9965.647614 eV Total energy + Delta-G solvation = -2565.741653 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 207.044 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -47.50636 -38.57643 -35.85207 -35.54617 -33.89128 -30.37171 -28.37523 -26.29210 -22.37543 -21.31566 -18.26946 -18.07386 -16.77105 -15.92767 -15.22117 -14.62173 -14.42887 -14.17175 -13.05868 -12.99611 -12.76044 -12.62815 -12.16052 -11.92436 -11.61807 -11.48607 -11.06233 -10.71581 -10.51495 -10.25093 -9.67833 -9.52085 -7.96334 -7.58040 -7.23891 -4.86605 1.85918 2.45549 2.80720 2.85595 2.89654 3.58861 3.59899 3.74452 4.36978 4.86516 5.02465 5.20421 5.77040 5.87909 6.51979 6.57699 6.70798 6.92757 6.96489 7.39639 7.56169 7.59080 7.97017 8.23069 8.26424 8.45010 8.57175 9.62935 Molecular weight = 207.04amu Principal moments of inertia in cm(-1) A = 0.042700 B = 0.010671 C = 0.008749 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 655.573663 B = 2623.392434 C = 3199.582468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.498 5.498 2 C 0.294 3.706 3 C -0.198 4.198 4 C -0.054 4.054 5 C -0.029 4.029 6 F -0.157 7.157 7 C 0.109 3.891 8 C -0.417 4.417 9 H 0.095 0.905 10 C 0.070 3.930 11 N -0.754 5.754 12 Si 0.922 3.078 13 H -0.261 1.261 14 H -0.272 1.272 15 H -0.256 1.256 16 C -0.182 4.182 17 C 0.165 3.835 18 O -0.503 6.503 19 H 0.114 0.886 20 H 0.294 0.706 21 H 0.139 0.861 22 H 0.379 0.621 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.683 -2.826 0.981 4.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.177 5.177 2 C -0.016 4.016 3 C -0.204 4.204 4 C -0.076 4.076 5 C -0.049 4.049 6 F -0.136 7.136 7 C 0.105 3.895 8 C -0.443 4.443 9 H 0.113 0.887 10 C -0.154 4.154 11 N -0.376 5.376 12 Si 0.745 3.255 13 H -0.186 1.186 14 H -0.197 1.197 15 H -0.179 1.179 16 C -0.202 4.202 17 C 0.118 3.882 18 O -0.312 6.312 19 H 0.132 0.868 20 H 0.105 0.895 21 H 0.156 0.844 22 H 0.233 0.767 Dipole moment (debyes) X Y Z Total from point charges 2.023 -2.236 0.452 3.049 hybrid contribution 1.251 -0.430 0.225 1.342 sum 3.274 -2.666 0.678 4.276 Atomic orbital electron populations 1.81063 1.12504 1.13031 1.11067 1.25715 0.92565 0.91709 0.91630 1.15421 0.83476 1.18630 1.02890 1.20016 0.92371 0.98234 0.96933 1.17219 0.88967 1.05451 0.93255 1.91318 1.81177 1.80570 1.60520 1.17590 0.93834 0.88399 0.89718 1.19873 0.91174 1.38160 0.95094 0.88652 1.26192 1.02523 0.92110 0.94583 1.69732 1.39617 1.28854 0.99376 0.86049 0.79824 0.80049 0.79610 1.18610 1.19684 1.17937 1.21245 0.90823 1.05604 1.02577 1.18202 0.89768 0.94187 0.86065 1.84757 1.77009 1.27729 1.41710 0.86797 0.89486 0.84363 0.76703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -10.98 18.54 41.84 0.78 -10.21 14 2 C 0.29 6.28 14.85 -22.47 -0.33 5.95 14 3 C -0.20 -4.21 5.78 -106.34 -0.61 -4.83 14 4 C -0.05 -1.13 9.64 -39.55 -0.38 -1.51 14 5 C -0.03 -0.65 7.25 -39.09 -0.28 -0.93 14 6 F -0.16 -3.51 16.69 2.25 0.04 -3.47 14 7 C 0.11 2.58 5.57 -106.77 -0.59 1.98 14 8 C -0.42 -9.64 8.75 -37.85 -0.33 -9.97 14 9 H 0.10 2.14 7.73 -52.48 -0.41 1.74 14 10 C 0.07 1.50 5.15 -17.31 -0.09 1.41 14 11 N -0.75 -16.87 10.95 55.56 0.61 -16.27 14 12 Si 0.92 15.99 29.59 -169.99 -5.03 10.96 14 13 H -0.26 -4.46 7.11 56.52 0.40 -4.06 14 14 H -0.27 -4.64 7.11 56.52 0.40 -4.23 14 15 H -0.26 -4.44 7.11 56.52 0.40 -4.04 14 16 C -0.18 -4.15 8.60 -38.79 -0.33 -4.48 14 17 C 0.16 3.54 6.69 -38.82 -0.26 3.28 14 18 O -0.50 -9.78 12.92 -19.03 -0.25 -10.02 14 19 H 0.11 2.13 8.06 -52.48 -0.42 1.71 14 20 H 0.29 5.87 8.29 -40.82 -0.34 5.53 14 21 H 0.14 3.20 6.19 -52.49 -0.32 2.87 14 22 H 0.38 5.40 9.06 45.56 0.41 5.81 14 LS Contribution 221.61 15.07 3.34 3.34 Total: -1.00 -25.82 221.61 -3.61 -29.43 By element: Atomic # 1 Polarization: 5.20 SS G_CDS: 0.13 Total: 5.33 kcal Atomic # 6 Polarization: -5.88 SS G_CDS: -3.22 Total: -9.10 kcal Atomic # 7 Polarization: -27.86 SS G_CDS: 1.38 Total: -26.47 kcal Atomic # 8 Polarization: -9.78 SS G_CDS: -0.25 Total: -10.02 kcal Atomic # 9 Polarization: -3.51 SS G_CDS: 0.04 Total: -3.47 kcal Atomic # 14 Polarization: 15.99 SS G_CDS: -5.03 Total: 10.96 kcal Total LS contribution 3.34 Total: 3.34 kcal Total: -25.82 -3.61 -29.43 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575650487.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.784 kcal (2) G-P(sol) polarization free energy of solvation -25.824 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.434 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds